Dictyostelium discoideum cDNA Clone CFI563

Sequence CFI563

ATTTGCACAA AAATTATTTA TTTATTTATT TATTTATTTA TTTTAATTTA
AAATGTCAAC TTTATATCAA ATTTTCAAAG ATACAACTTC AAGAGATAAT
AAAAAAAAAT TGATAACAAT TCCTATTGCC AAAGAGGATA GTCAATCATT
TGGTTCACTC TCTATCACCT ATCAAAAGTT TTTAAATGAT TCAGTTAGCT
TTGCAAATAA ATTAATTGAA AAAGGTATTA AAACTGGTGA TGTAGTTTCA
TTAGTTATTA CAAATGGTTA TCCAATTTTA TCATGTTTCT TGGGATCAAC
ATTTGCAAGA TGTATTGCAG CACCATTAAA TTCAGCATAT AAGAGTGAAG
AATTTAATTT CTATTATAAA GATATGGGAG CAAATATTGT TATTGTTCAA
AAAGGGTTAA GTGAAGCATT GAAATCAGCC AAGGAATTAG GTATTAAAGT
TTGGGAAATT GAAAATGTTG AAAATGAAAA GGAAGGTAAA CTTTATTATA
GAATTACAGA TCCAAGCAAT GGAGATGACT TGATTTTCTC AAGTGAAACA
ATTTCAGGAG AGGATGAAGG TGATAAAATT AAATTGGAGA ----------
CCAACAAAGG GGTTACTTAG ATTCATTAGA TCATCGTCGT CATCATTATC
ACCAACTTTA TTAGAGACAT TGGAGCAATT CTTTGGCTGT CCAGTAATTG
AGTCCTACGG TATGACAGAG GCTTCCCACC AAATGGCATC GAACCCATTG
CCACAAGACG GTCCAAGAAA GCCTGGTAGC GTCGGTAAGG GATTCAATGT
TCAAATTAGT ATTGTCAATG ACAATGGCGA GCATCAAAAA CAAGGTGATG
TAGGTGAAGT TTGTATCAAG GGCAAGAATG TTATGCATGG TTATCATAAT
AATCCACAAG CAAACATTGA TAACTTTACA AAGGATGGTT GGTTCCTCAC
TGGTGATATC GGTTATTTAG ATCAAGACGG CTACTTGATT CTCAAGGGTA
GAAAGAAGGA AATCATCAAT AGAGGTGGTG AGAAAATCTC CCCATTGGAA
GTTGATAATG CTCTCTTGGA AAATGATAAA ATTCTCGAAG CTGTTTGCTT
TGGTGTATCA GATGAAAAGT ATGGCGAAGA GATTTGGGCT GCCGTCATCC
CAAAAGTACC TCAATCAATT ACAGTCGAAG AAATCACCCA ATTCCTCCAA
AAGAAATTAA TCTCTTTCAA AGTGCCAAAG AAAATCATTA TCACTGATAA
TTTCCCAAAA ACTGCTTCAG GTAAAATTCA AAGAAGATTC ATTGCAGATT
TCTTTTTAAA ACAACAAAAT CAATAAATTA AATTTAAATT

Translated Amino Acid Sequence CFI563

faqklfiylfiylf*FKMSTLYQIFKDTTSRDNKKKLITIPIAKEDSQSFGSLSITYQKF
LNDSVSFANKLIEKGIKTGDVVSLVITNGYPILSCFLGSTFARCIAAPLNSAYKSEEFNF
YYKDMGANIVIVQKGLSEALKSAKELGIKVWEIENVENEKEGKLYYRITDPSNGDDLIFS
SETISGEDEGDKIKLE---

---PTKGLLRFIRSSSSSLSPTLLETLEQFFGCPVIESYGMTEASHQMASNPLPQDGPRK
PGSVGKGFNVQISIVNDNGEHQKQGDVGEVCIKGKNVMHGYHNNPQANIDNFTKDGWFLT
GDIGYLDQDGYLILKGRKKEIINRGGEKISPLEVDNALLENDKILEAVCFGVSDEKYGEE
IWAAVIPKVPQSITVEEITQFLQKKLISFKVPKKIIITDNFPKTASGKIQRRFIADFFLK
QQNQ*ikfk

Homology CFI563 vs CSM-cDNA

Sequences producing significant alignments:                      (bits) Value


CFI563 (CFI563Q) /CSM/CF/CFI5-C/CFI563Q.Seq.d/                       2444   0.0
CFH325 (CFH325Q) /CSM/CF/CFH3-B/CFH325Q.Seq.d/                       1443   0.0
AFO765 (AFO765Q) /CSM/AF/AFO7-C/AFO765Q.Seq.d/                       1427   0.0
VFF556 (VFF556Q) /CSM/VF/VFF5-C/VFF556Q.Seq.d/                       1425   0.0
SFG669 (SFG669Q) /CSM/SF/SFG6-C/SFG669Q.Seq.d/                       1396   0.0
AFG820 (AFG820Q) /CSM/AF/AFG8-A/AFG820Q.Seq.d/                       1382   0.0
SFG489 (SFG489Q) /CSM/SF/SFG4-D/SFG489Q.Seq.d/                       1374   0.0
CFC728 (CFC728Q) /CSM/CF/CFC7-B/CFC728Q.Seq.d/                       1364   0.0
SFI837 (SFI837Q) /CSM/SF/SFI8-B/SFI837Q.Seq.d/                       1346   0.0
CFA512 (CFA512Q) /CSM/CF/CFA5-A/CFA512Q.Seq.d/                       1326   0.0

Homology CFI563 vs DNA

Sequences producing significant alignments:                  (bits) Value  N


AC116920|AC116920.2 Dictyostelium discoideum chromosome 2 ma...    38   1e-05  15
AC116977|AC116977.2 Dictyostelium discoideum chromosome 2 ma...    36   2e-04  16
AC116982|AC116982.2 Dictyostelium discoideum chromosome 2 ma...    42   2e-04  18
AC116957|AC116957.2 Dictyostelium discoideum chromosome 2 ma...    34   5e-04  22
AC116984|AC116984.2 Dictyostelium discoideum chromosome 2 ma...    42   9e-04  21
AR271569|AR271569.1 Sequence 1 from patent US 6503729.             34   9e-04  29
AL445564|AL445564.1 Mycoplasma pulmonis (strain UAB CTIP) co...    34   0.002  16
AL445563|AL445563.1 Mycoplasma pulmonis (strain UAB CTIP) co...    32   0.002  19
AL844509|AL844509.1 Plasmodium falciparum chromosome 13.           36   0.003  28
AC117082|AC117082.2 Dictyostelium discoideum chromosome 2 ma...    36   0.004  8

Homology CFI563 vs Protein

Sequences producing significant alignments:                      (bits) Value


AF354454_1(AF354454|pid:none) Capsicum annuum putative acyl-CoA ...   253   2e-65
EF676481_1(EF676481|pid:none) Picea sitchensis clone WS02739_F21...   244   6e-63
CR382131_531(CR382131|pid:none) Yarrowia lipolytica strain CLIB1...   238   8e-61
AL606651_2(AL606651|pid:none) Oryza sativa genomic DNA, chromoso...   236   3e-60
FP929083_447(FP929083|pid:none) Leptosphaeria maculans JN3 lm_Su...   235   5e-60
EU974597_1(EU974597|pid:none) Zea mays clone 453960 peroxisomal-...   234   9e-60
CR380957_291(CR380957|pid:none) Candida glabrata strain CBS138 c...   233   2e-59
(O74976) RecName: Full=Putative peroxisomal-coenzyme A synthetas...   230   2e-58
CP003003_1300(CP003003|pid:none) Myceliophthora thermophila ATCC...   229   4e-58
CP003009_1425(CP003009|pid:none) Thielavia terrestris NRRL 8126 ...   228   6e-58

Homology CFI563 vs Genome