Homology CFI509 vs DNA
Query= CFI509 (CFI509Q) /CSM/CF/CFI5-A/CFI509Q.Seq.d/
(777 letters)
Database: ddbjhum1.seq; ddbjhum10.seq; ddbjhum11.seq; ddbjhum12.seq;
ddbjhum13.seq; ddbjhum14.seq; ddbjhum15.seq; ddbjhum16.seq;
ddbjhum17.seq; ddbjhum18.seq; ddbjhum19.seq; ddbjhum2.seq;
ddbjhum20.seq; ddbjhum21.seq; ddbjhum3.seq; ddbjhum4.seq;
ddbjhum5.seq; ddbjhum6.seq; ddbjhum7.seq; ddbjhum8.seq; ddbjhum9.seq;
/db/DDBJNEW.DATA/b/new_ddbjhum.seq; ddbjpri.seq;
/db/DDBJNEW.DATA/b/new_ddbjpri.seq; ddbjrod1.seq; ddbjrod2.seq;
ddbjrod3.seq; ddbjrod4.seq; ddbjrod5.seq; ddbjrod6.seq; ddbjrod7.seq;
ddbjrod8.seq; /db/DDBJNEW.DATA/b/new_ddbjrod.seq; ddbjmam.seq;
/db/DDBJNEW.DATA/b/new_ddbjmam.seq; ddbjvrt1.seq; ddbjvrt2.seq;
ddbjvrt3.seq; /db/DDBJNEW.DATA/b/new_ddbjvrt.seq; ddbjinv1.seq;
ddbjinv2.seq; ddbjinv3.seq; ddbjinv4.seq; ddbjinv5.seq;
/db/DDBJNEW.DATA/b/new_ddbjinv.seq; ddbjpln1.seq; ddbjpln2.seq;
ddbjpln3.seq; ddbjpln4.seq; ddbjpln5.seq; ddbjpln6.seq; ddbjpln7.seq;
ddbjpln8.seq; /db/DDBJNEW.DATA/b/new_ddbjpln.seq; ddbjbct1.seq;
ddbjbct2.seq; ddbjbct3.seq; ddbjbct4.seq; ddbjbct5.seq; ddbjbct6.seq;
/db/DDBJNEW.DATA/b/new_ddbjbct.seq; ddbjvrl1.seq; ddbjvrl2.seq;
ddbjvrl3.seq; /db/DDBJNEW.DATA/b/new_ddbjvrl.seq; ddbjphg.seq;
/db/DDBJNEW.DATA/b/new_ddbjphg.seq; ddbjuna.seq;
/db/DDBJNEW.DATA/b/new_ddbjuna.seq; ddbjgss1.seq; ddbjgss10.seq;
ddbjgss11.seq; ddbjgss12.seq; ddbjgss13.seq; ddbjgss14.seq;
ddbjgss15.seq; ddbjgss16.seq; ddbjgss17.seq; ddbjgss18.seq;
ddbjgss19.seq; ddbjgss2.seq; ddbjgss20.seq; ddbjgss21.seq;
ddbjgss22.seq; ddbjgss23.seq; ddbjgss24.seq; ddbjgss25.seq;
ddbjgss26.seq; ddbjgss27.seq; ddbjgss28.seq; ddbjgss29.seq;
ddbjgss3.seq; ddbjgss30.seq; ddbjgss31.seq; ddbjgss32.seq;
ddbjgss33.seq; ddbjgss34.seq; ddbjgss35.seq; ddbjgss36.seq;
ddbjgss37.seq; ddbjgss38.seq; ddbjgss39.seq; ddbjgss4.seq;
ddbjgss40.seq; ddbjgss41.seq; ddbjgss42.seq; ddbjgss43.seq;
ddbjgss44.seq; ddbjgss45.seq; ddbjgss46.seq; ddbjgss47.seq;
ddbjgss48.seq; ddbjgss49.seq; ddbjgss5.seq; ddbjgss50.seq;
ddbjgss51.seq; ddbjgss52.seq; ddbjgss53.seq; ddbjgss54.seq;
ddbjgss55.seq; ddbjgss56.seq; ddbjgss57.seq; ddbjgss58.seq;
ddbjgss59.seq; ddbjgss6.seq; ddbjgss60.seq; ddbjgss61.seq;
ddbjgss62.seq; ddbjgss63.seq; ddbjgss64.seq; ddbjgss7.seq;
ddbjgss8.seq; ddbjgss9.seq; /db/DDBJNEW.DATA/b/new_ddbjgss1.seq;
/db/DDBJNEW.DATA/b/new_ddbjgss2.seq;
/db/DDBJNEW.DATA/b/new_ddbjgss3.seq;
/db/DDBJNEW.DATA/b/new_ddbjgss4.seq; ddbjhtg1.seq; ddbjhtg10.seq;
ddbjhtg11.seq; ddbjhtg12.seq; ddbjhtg13.seq; ddbjhtg14.seq;
ddbjhtg15.seq; ddbjhtg16.seq; ddbjhtg17.seq; ddbjhtg18.seq;
ddbjhtg19.seq; ddbjhtg2.seq; ddbjhtg20.seq; ddbjhtg21.seq;
ddbjhtg22.seq; ddbjhtg23.seq; ddbjhtg24.seq; ddbjhtg25.seq;
ddbjhtg26.seq; ddbjhtg27.seq; ddbjhtg28.seq; ddbjhtg29.seq;
ddbjhtg3.seq; ddbjhtg30.seq; ddbjhtg31.seq; ddbjhtg32.seq;
ddbjhtg33.seq; ddbjhtg34.seq; ddbjhtg35.seq; ddbjhtg36.seq;
ddbjhtg37.seq; ddbjhtg38.seq; ddbjhtg39.seq; ddbjhtg4.seq;
ddbjhtg40.seq; ddbjhtg41.seq; ddbjhtg42.seq; ddbjhtg43.seq;
ddbjhtg44.seq; ddbjhtg45.seq; ddbjhtg46.seq; ddbjhtg47.seq;
ddbjhtg48.seq; ddbjhtg49.seq; ddbjhtg5.seq; ddbjhtg50.seq;
ddbjhtg51.seq; ddbjhtg52.seq; ddbjhtg6.seq; ddbjhtg7.seq;
ddbjhtg8.seq; ddbjhtg9.seq; /db/DDBJNEW.DATA/b/new_ddbjhtg1.seq;
ddbjpat1.seq; ddbjpat2.seq; ddbjpat3.seq; ddbjpat4.seq; ddbjpat5.seq;
ddbjpat6.seq; ddbjpat7.seq; ddbjpat8.seq;
/db/DDBJNEW.DATA/b/new_ddbjpat.seq; ddbjsts1.seq; ddbjsts2.seq;
ddbjsts3.seq; /db/DDBJNEW.DATA/b/new_ddbjsts.seq; ddbjsyn.seq;
/db/DDBJNEW.DATA/b/new_ddbjsyn.seq; est_atha1.seq;
/db/DDBJNEW.DATA/b/new_est_atha1.seq; est_btra1.seq;
/db/DDBJNEW.DATA/b/new_est_btra1.seq; est_cele1.seq; est_crei1.seq;
/db/DDBJNEW.DATA/b/new_est_crei1.seq; est_cint1.seq; est_drer1.seq;
/db/DDBJNEW.DATA/b/new_est_drer1.seq; est_dmel1.seq;
/db/DDBJNEW.DATA/b/new_est_dmel1.seq; est_ggal1.seq;
/db/DDBJNEW.DATA/b/new_est_ggal1.seq; est_gmax1.seq;
/db/DDBJNEW.DATA/b/new_est_gmax1.seq; est_hum1.seq; est_hum2.seq;
est_hum3.seq; est_hum4.seq; /db/DDBJNEW.DATA/b/new_est_hum1.seq;
est_hvul1.seq; /db/DDBJNEW.DATA/b/new_est_hvul1.seq; est_lesc1.seq;
est_mous1.seq; est_mous2.seq; est_mous3.seq;
/db/DDBJNEW.DATA/b/new_est_mous1.seq; est_mtru1.seq; est_osat1.seq;
/db/DDBJNEW.DATA/b/new_est_osat1.seq; est_rnor1.seq;
/db/DDBJNEW.DATA/b/new_est_rnor1.seq; est_stro1.seq;
/db/DDBJNEW.DATA/b/new_est_stro1.seq; est_taes1.seq;
/db/DDBJNEW.DATA/b/new_est_taes1.seq; est_xlae1.seq;
/db/DDBJNEW.DATA/b/new_est_xlae1.seq; est_zmay1.seq;
/db/DDBJNEW.DATA/b/new_est_zmay1.seq; est_rest1.seq; est_rest2.seq;
/db/DDBJNEW.DATA/b/new_est_rest1.seq
30,155,670 sequences; S,508,804,178 total letters
Searching....................................................done
Score E
Sequences producing significant alignments: (bits) Value N
AJ272500|AJ272500.1 Dictyostelium discoideum mRNA for mitoch... 1445 0.0 2
AC142288|AC142288.1 Pan troglodytes BAC clone RP43-178D12 fr... 36 0.37 2
AC104972|AC104972.1 Homo sapiens chromosome 8 clone RP11-139... 34 0.63 6
CE206571|CE206571.1 tigr-gss-dog-17000372656428 Dog Library ... 38 1.5 2
AC125062|AC125062.2 Mus musculus chromosome UNK clone RP23-4... 38 1.8 5
AC008877|AC008877.9 Homo sapiens chromosome 5 clone CTD-2204... 44 2.8 1
AP003827|AP003827.3 Oryza sativa (japonica cultivar-group) g... 44 2.8 1
AI488438|AI488438.1 EST246777 tomato ovary, TAMU Lycopersico... 44 2.8 1
AW930740|AW930740.1 EST356583 tomato fruit mature green, TAM... 44 2.8 1
AI485588|AI485588.1 EST243909 tomato ovary, TAMU Lycopersico... 44 2.8 1
AC118225|AC118225.3 Mus musculus clone RP23-344D21, WORKING ... 44 2.8 1
AI895668|AI895668.1 EST265111 tomato callus, TAMU Lycopersic... 44 2.8 1
AC016599|AC016599.6 Homo sapiens chromosome 5 clone CTD-2054... 44 2.8 1
AW737287|AW737287.1 EST338810 tomato flower buds, anthesis, ... 44 2.8 1
AC103034|AC103034.5 Rattus norvegicus clone CH230-204P5, WOR... 44 2.8 1
AC010379|AC010379.5 Homo sapiens chromosome 5 clone CTD-2064... 44 2.8 1
AI488569|AI488569.1 EST246908 tomato ovary, TAMU Lycopersico... 44 2.8 1
AC034233|AC034233.5 Homo sapiens chromosome 5 clone CTD-2251... 44 2.8 1
AX347035|AX347035.1 Sequence 2106 from Patent WO0200928. 44 2.8 1
AL929467|AL929467.6 Zebrafish DNA sequence from clone CH211-... 36 3.1 5
N75668|N75668.1 yv29e01.r1 Soares fetal liver spleen 1NFLS H... 38 4.3 2
BM718564|BM718564.1 UI-E-EO1-ajb-f-08-0-UI.r1 UI-E-EO1 Homo ... 38 4.4 2
AC116651|AC116651.6 Homo sapiens BAC clone RP11-799M12 from ... 34 4.9 5
AC094097|AC094097.2 Homo sapiens chromosome 5 clone RP11-136... 30 4.9 8
AC016185|AC016185.4 Homo sapiens chromosome 18 clone RP11-65... 40 5.4 4
AC145865|AC145865.1 Pan troglodytes chromosome UNK clone RP4... 32 5.5 7
AC018356|AC018356.26 Homo sapiens 3 BAC RP11-258G22 (Roswell... 38 5.6 6
AZ048455|AZ048455.1 PSB104 Barley PstI genomic clones Hordeu... 36 5.7 2
AB051474|AB051474.1 Homo sapiens mRNA for KIAA1687 protein, ... 38 5.7 3
BU743007|BU743007.1 UI-E-EO1-ajb-f-08-0-UI.s1 UI-E-EO1 Homo ... 38 6.0 2
AC110231|AC110231.3 Mus musculus clone RP23-56D13, LOW-PASS ... 36 6.5 2
AC103730|AC103730.2 Homo sapiens chromosome 11 clone RP11-18... 36 6.5 2
AC116332|AC116332.2 Homo sapiens chromosome 5 clone CTD-2086... 34 6.5 6
AC007485|AC007485.10 Homo sapiens chromosome 17, clone RP11-... 34 7.3 7
AU299806|AU299806.1 Cryptomeria japonica mRNA, clone: CF0574... 36 7.8 2
AC117075|AC117075.2 Dictyostelium discoideum chromosome 2 ma... 34 8.3 9
AL590364|AL590364.5 Human DNA sequence from clone RP11-342D1... 34 8.5 3
AC025799|AC025799.2 Homo sapiens chromosome 15 clone RP11-69... 40 8.7 5
AC018648|AC018648.5 Homo sapiens chromosome 7 clone RP11-265... 42 11 1
AC080167|AC080167.1 Mus musculus clone RP23-116J6, WORKING D... 42 11 1
AA251508|AA251508.1 zs10b10.s1 NCI_CGAP_GCB1 Homo sapiens cD... 42 11 1
AE009123|AE009123.1 Agrobacterium tumefaciens strain C58 cir... 42 11 1
CD328470|CD328470.1 AGENCOURT_14164465 NICHD_XGC_Brn1 Xenopu... 42 11 1
BG766927|BG766927.1 602740625F1 NIH_MGC_49 Homo sapiens cDNA... 42 11 1
AC023002|AC023002.2 Homo sapiens chromosome 7 clone RP11-265... 42 11 1
AW497315|AW497315.1 ga58a02.y1 Moss EST library PPU Physcomi... 42 11 1
AE008088|AE008088.1 Agrobacterium tumefaciens str. C58 circu... 42 11 1
AB098532|AB098532.1 Laticauda semifasciata novel long chain ... 42 11 1
AJ010348|AJ010348.1 Fugu rubripes UBE1-like gene, PRGFR2 gen... 42 11 1
AL844509|AL844509.1 Plasmodium falciparum chromosome 13. 42 11 1
BX571777|BX571777.3 Zebrafish DNA sequence *** SEQUENCING IN... 42 11 1
AC007535|AC007535.3 Homo sapiens 12p13 BAC RPCI11-154I21 (Ro... 42 11 1
BQ666989|BQ666989.1 pb50g09.y1 Anc caninum L3 serum stim pAM... 42 11 1
>AJ272500|AJ272500.1 Dictyostelium discoideum mRNA for mitochondrial
apoptosis inducing factor (aif gene).
Length = 1669
Score = 1445 bits (729), Expect(2) = 0.0
Identities = 729/729 (100%)
Strand = Plus / Plus
Query: 36 cccagaatctggtgtattaagtactttattcccagactatcttagtaaatatgcaactga 95
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 902 cccagaatctggtgtattaagtactttattcccagactatcttagtaaatatgcaactga 961
Query: 96 agaaatcattaagagtggtgttaatgttcacactggtactttaattaaagatgtagtcga 155
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 962 agaaatcattaagagtggtgttaatgttcacactggtactttaattaaagatgtagtcga 1021
Query: 156 taactctgaaaatggtagattaactgtcactttaaacaatggtaaaacctttgaaactga 215
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1022 taactctgaaaatggtagattaactgtcactttaaacaatggtaaaacctttgaaactga 1081
Query: 216 tcatgttgttgttgccgccggtatcattccaaatacaaatgtagttaaaagtacaacatt 275
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1082 tcatgttgttgttgccgccggtatcattccaaatacaaatgtagttaaaagtacaacatt 1141
Query: 276 agaaatagatccaataaatggtggttatgtcgtcaatccagaacttcaagctcgtaccga 335
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1142 agaaatagatccaataaatggtggttatgtcgtcaatccagaacttcaagctcgtaccga 1201
Query: 336 tctatatgtcgctggtgatgtcgcatcctattatgatttcagtttaggtgtacgtcgtcg 395
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1202 tctatatgtcgctggtgatgtcgcatcctattatgatttcagtttaggtgtacgtcgtcg 1261
Query: 396 tgttgaacatcatgaccatgcacgtgccactggtgaaatggctggttcaaatatgtcaac 455
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1262 tgttgaacatcatgaccatgcacgtgccactggtgaaatggctggttcaaatatgtcaac 1321
Query: 456 taaggatacaccagctccatacacatatcaaccattcttttggtcagatttaacaccagg 515
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1322 taaggatacaccagctccatacacatatcaaccattcttttggtcagatttaacaccagg 1381
Query: 516 tgttggttttgaagctgttggtaatactagctcaaaattaaaaacattttcagtttggga 575
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1382 tgttggttttgaagctgttggtaatactagctcaaaattaaaaacattttcagtttggga 1441
Query: 576 gaagccatcctctgatgaaactaaacaatcctacaccaaaggtaacatctattacttgaa 635
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1442 gaagccatcctctgatgaaactaaacaatcctacaccaaaggtaacatctattacttgaa 1501
Query: 636 tgataacaataatgtcgttggtgtcttatgttatggtaactatggtaaaatggatactgc 695
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1502 tgataacaataatgtcgttggtgtcttatgttatggtaactatggtaaaatggatactgc 1561
Query: 696 tcgtgacctcatcttaaaacgtagaactatcgaagatttaaatcaattacaacatgctat 755
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1562 tcgtgacctcatcttaaaacgtagaactatcgaagatttaaatcaattacaacatgctat 1621
Query: 756 cgatttcga 764
|||||||||
Sbjct: 1622 cgatttcga 1630
Score = 54.0 bits (27), Expect(2) = 0.0
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 11 aaacattaaaatcgatcaaattttccc 37
|||||||||||||||||||||||||||
Sbjct: 878 aaacattaaaatcgatcaaattttccc 904
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Number of Hits to DB: 17,902,914
Number of Sequences: 30155670
Number of extensions: 17902914
Number of successful extensions: 1250994
Number of sequences better than 10.0: 109
length of query: 777
length of database: S,508,804,178
effective HSP length: 22
effective length of query: 755
effective length of database: R,845,379,438
effective search space: 26308261475690
effective search space used: 26308261475690
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 21 (42.1 bits)
ANTI-DNA BLAST search was processed by blast@nig.ac.jp, National Institute of Genetics, Japan.
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