Dictyostelium discoideum cDNA Clone CFI487

Sequence CFI487

ATAACTTCTT TACAGATAAA GACTTGGTTA AGGTTTCTTT TGATGGTATT
GACCAACCCA ATTTTATCAT TTCAGTAAAT CATAAACAAA TTCAAGTGAA
TAACTATAAT AGAGTTGATC CCGGTCCAAT GTCTGTTAAT ATTACCGTAG
ATGAGGTCTC AATAGAAAAG AATTATATTC ATTGTTTCCC AGCAATAATA
ACATCAATAT CATCAGTATC AAATCATTTA GATGGTATTG TTACAATTAA
AGGTGAAAAA TTATCTTCAA CTTTAAATTC ATCATTGACA CCATCAATTA
CAATTGGTGA TAAAGTATGT AAATTTATTA AATCAACAAC AACTGAATTG
GAATGTAAAT TGGATGCAAA TGAATTGGGT GGTAAAAACT TACCAGTTAA
CGTTAATTTC GGTGGTTGTG ATTCAACAAG TCCTAATGGT GTATCATTTA
CATATAATAT TCCGACATTA TCAAGTGGAT CATATTCTAA TGGTATCGTT
ACATTAATTG GTACAAATCT TGGTACAAAT AACGAATCAT CCATTCAATT
ATATGGTGAT GGAATTAAAA ATAC------ ----CAATTT AATGTATCAT
CATCTGATGA AAAGAGTGTA ACATTTGAAT TACCTCATTT AAGATGTAGA
TCATTTAATA TTAATTTCAC TCGTTCTGGT ATTACCGCAA AAACACTTTC
AATTTCAGCA TCATTATCAG TAAATGTAAT TAATAGACCA ACAGTATCAA
ATGGAATATT AAATATTGAA ATATATTATA TGGATTGTAC AATTAGTTCA
TCAGCACCAA GTATTACTGT TGGTGATTCA TCATCAGCCT CACCATGTTC
AATACCATCA TCAAATTCTA GTTACTATGA AACAACATGT CCAACACCAT
ACGGTACTGG TATTAATAAA CAATTTATAT TCAAATTAAA CTCAGAGACA
GTCAGTGATC AATTCTCATA TGCACCACCA GAAGTTGAGA ATCGTACAAT
TTCTGATGAT GGAACTAATA TTGAATTACA CGGTAATAAT TTTGGTAATT
CAACATCATT AATTAAAGTT TATTTAAATG GTAGTGACAT TTCATCAGAA
ATTCAAGAAT TAGAAGATCA TCAATTAACT ATTAAAATAT TGGATTCATA
TGAAAATGGC CCAATTAATA TTACTGTAGA TGGTAATTAT ATGGATTCAT
TATTTTATTT CACATTACCT CCTGTCATTA TCGAAAAAAA AATAAATAAA
ATATAAA

Translated Amino Acid Sequence CFI487

NFFTDKDLVKVSFDGIDQPNFIISVNHKQIQVNNYNRVDPGPMSVNITVDEVSIEKNYIH
CFPAIITSISSVSNHLDGIVTIKGEKLSSTLNSSLTPSITIGDKVCKFIKSTTTELECKL
DANELGGKNLPVNVNFGGCDSTSPNGVSFTYNIPTLSSGSYSNGIVTLIGTNLGTNNESS
IQLYGDGIKN---

---QFNVSSSDEKSVTFELPHLRCRSFNINFTRSGITAKTLSISASLSVNVINRPTVSNG
ILNIEIYYMDCTISSSAPSITVGDSSSASPCSIPSSNSSYYETTCPTPYGTGINKQFIFK
LNSETVSDQFSYAPPEVENRTISDDGTNIELHGNNFGNSTSLIKVYLNGSDISSEIQELE
DHQLTIKILDSYENGPINITVDGNYMDSLFYFTLPPVIIEKKINKI*

Homology CFI487 vs CSM-cDNA

Sequences producing significant alignments:                      (bits) Value


CFI487 (CFI487Q) /CSM/CF/CFI4-D/CFI487Q.Seq.d/                       2385   0.0
AFL595 (AFL595Q) /CSM/AF/AFL5-D/AFL595Q.Seq.d/                       1263   0.0
SSC234 (SSC234Q) /CSM/SS/SSC2-B/SSC234Q.Seq.d/                       1247   0.0
CFF803 (CFF803Q) /CSM/CF/CFF8-A/CFF803Q.Seq.d/                       1154   0.0
AHG409 (AHG409Q) /CSM/AH/AHG4-A/AHG409Q.Seq.d/                       1126   0.0
CFI183 (CFI183Q) /CSM/CF/CFI1-D/CFI183Q.Seq.d/                       1112   0.0
SFH657 (SFH657Q) /CSM/SF/SFH6-C/SFH657Q.Seq.d/                        825   0.0
SHC702 (SHC702Q) /CSM/SH/SHC7-A/SHC702Q.Seq.d/                        789   0.0
AHN473 (AHN473Q) /CSM/AH/AHN4-D/AHN473Q.Seq.d/                        747   0.0
AHK296 (AHK296Q) /CSM/AH/AHK2-D/AHK296Q.Seq.d/                        739   0.0

Homology CFI487 vs DNA

Sequences producing significant alignments:                  (bits) Value  N


U09478|U09478.1 Dictyostelium discoideum KAx-3 LagC protein ...  1271   0.0    3
AF258615|AF258615.1 Dictyostelium discoideum LagC protein (l...  1271   0.0    3
AB032076|AB032076.1 Dictyostelium discoideum mRNA for lagC2,...   182   0.0    12
AC116982|AC116982.2 Dictyostelium discoideum chromosome 2 ma...   291   0.0    17
AF250284|AF250284.1 Amsacta moorei entomopoxvirus, complete ...    32   6e-13  24
AF063866|AF063866.1 Melanoplus sanguinipes entomopoxvirus, c...    36   1e-11  21
AL844509|AL844509.1 Plasmodium falciparum chromosome 13.           48   3e-10  26
AC116957|AC116957.2 Dictyostelium discoideum chromosome 2 ma...    42   5e-09  21
AC116986|AC116986.2 Dictyostelium discoideum chromosome 2 ma...    32   1e-07  21
BX842644|BX842644.1 Mycoplasma mycoides subsp. mycoides SC g...    36   2e-07  20

Homology CFI487 vs Protein

Sequences producing significant alignments:                      (bits) Value


A54280(A54280) cell differentiation protein LagC precursor - sli...   729   0.0
FJ374943_1(FJ374943|pid:none) Dictyostelium discoideum strain QS...   724   0.0
FJ374945_1(FJ374945|pid:none) Dictyostelium discoideum strain QS...   724   0.0
FJ374931_1(FJ374931|pid:none) Dictyostelium discoideum strain QS...   724   0.0
FJ374944_1(FJ374944|pid:none) Dictyostelium discoideum strain QS...   722   0.0
FJ374949_1(FJ374949|pid:none) Dictyostelium discoideum strain QS...   722   0.0
FJ374927_1(FJ374927|pid:none) Dictyostelium discoideum strain QS...   688   0.0
FJ374941_1(FJ374941|pid:none) Dictyostelium discoideum strain QS...   686   0.0
FJ374925_1(FJ374925|pid:none) Dictyostelium discoideum strain QS...   686   0.0
FJ374933_1(FJ374933|pid:none) Dictyostelium discoideum strain QS...   685   0.0

Homology CFI487 vs Genome