Homology CFI459 vs DNA
Query= CFI459 (CFI459Q) /CSM/CF/CFI4-C/CFI459Q.Seq.d/
(1327 letters)
Database: ddbjhum1.seq; ddbjhum10.seq; ddbjhum11.seq; ddbjhum12.seq;
ddbjhum13.seq; ddbjhum14.seq; ddbjhum15.seq; ddbjhum16.seq;
ddbjhum17.seq; ddbjhum18.seq; ddbjhum19.seq; ddbjhum2.seq;
ddbjhum20.seq; ddbjhum21.seq; ddbjhum3.seq; ddbjhum4.seq;
ddbjhum5.seq; ddbjhum6.seq; ddbjhum7.seq; ddbjhum8.seq; ddbjhum9.seq;
/db/DDBJNEW.DATA/a/new_ddbjhum.seq; ddbjpri.seq;
/db/DDBJNEW.DATA/a/new_ddbjpri.seq; ddbjrod1.seq; ddbjrod2.seq;
ddbjrod3.seq; ddbjrod4.seq; ddbjrod5.seq; ddbjrod6.seq; ddbjrod7.seq;
ddbjrod8.seq; /db/DDBJNEW.DATA/a/new_ddbjrod.seq; ddbjmam.seq;
/db/DDBJNEW.DATA/a/new_ddbjmam.seq; ddbjvrt1.seq; ddbjvrt2.seq;
ddbjvrt3.seq; /db/DDBJNEW.DATA/a/new_ddbjvrt.seq; ddbjinv1.seq;
ddbjinv2.seq; ddbjinv3.seq; ddbjinv4.seq; ddbjinv5.seq;
/db/DDBJNEW.DATA/a/new_ddbjinv.seq; ddbjpln1.seq; ddbjpln2.seq;
ddbjpln3.seq; ddbjpln4.seq; ddbjpln5.seq; ddbjpln6.seq; ddbjpln7.seq;
ddbjpln8.seq; /db/DDBJNEW.DATA/a/new_ddbjpln.seq; ddbjbct1.seq;
ddbjbct2.seq; ddbjbct3.seq; ddbjbct4.seq; ddbjbct5.seq; ddbjbct6.seq;
/db/DDBJNEW.DATA/a/new_ddbjbct.seq; ddbjvrl1.seq; ddbjvrl2.seq;
ddbjvrl3.seq; /db/DDBJNEW.DATA/a/new_ddbjvrl.seq; ddbjphg.seq;
/db/DDBJNEW.DATA/a/new_ddbjphg.seq; ddbjuna.seq;
/db/DDBJNEW.DATA/a/new_ddbjuna.seq; ddbjgss1.seq; ddbjgss10.seq;
ddbjgss11.seq; ddbjgss12.seq; ddbjgss13.seq; ddbjgss14.seq;
ddbjgss15.seq; ddbjgss16.seq; ddbjgss17.seq; ddbjgss18.seq;
ddbjgss19.seq; ddbjgss2.seq; ddbjgss20.seq; ddbjgss21.seq;
ddbjgss22.seq; ddbjgss23.seq; ddbjgss24.seq; ddbjgss25.seq;
ddbjgss26.seq; ddbjgss27.seq; ddbjgss28.seq; ddbjgss29.seq;
ddbjgss3.seq; ddbjgss30.seq; ddbjgss31.seq; ddbjgss32.seq;
ddbjgss33.seq; ddbjgss34.seq; ddbjgss35.seq; ddbjgss36.seq;
ddbjgss37.seq; ddbjgss38.seq; ddbjgss39.seq; ddbjgss4.seq;
ddbjgss40.seq; ddbjgss41.seq; ddbjgss42.seq; ddbjgss43.seq;
ddbjgss44.seq; ddbjgss45.seq; ddbjgss46.seq; ddbjgss47.seq;
ddbjgss48.seq; ddbjgss49.seq; ddbjgss5.seq; ddbjgss50.seq;
ddbjgss51.seq; ddbjgss52.seq; ddbjgss53.seq; ddbjgss54.seq;
ddbjgss55.seq; ddbjgss56.seq; ddbjgss57.seq; ddbjgss58.seq;
ddbjgss59.seq; ddbjgss6.seq; ddbjgss60.seq; ddbjgss61.seq;
ddbjgss62.seq; ddbjgss63.seq; ddbjgss64.seq; ddbjgss7.seq;
ddbjgss8.seq; ddbjgss9.seq; /db/DDBJNEW.DATA/a/new_ddbjgss1.seq;
/db/DDBJNEW.DATA/a/new_ddbjgss2.seq;
/db/DDBJNEW.DATA/a/new_ddbjgss3.seq;
/db/DDBJNEW.DATA/a/new_ddbjgss4.seq; ddbjhtg1.seq; ddbjhtg10.seq;
ddbjhtg11.seq; ddbjhtg12.seq; ddbjhtg13.seq; ddbjhtg14.seq;
ddbjhtg15.seq; ddbjhtg16.seq; ddbjhtg17.seq; ddbjhtg18.seq;
ddbjhtg19.seq; ddbjhtg2.seq; ddbjhtg20.seq; ddbjhtg21.seq;
ddbjhtg22.seq; ddbjhtg23.seq; ddbjhtg24.seq; ddbjhtg25.seq;
ddbjhtg26.seq; ddbjhtg27.seq; ddbjhtg28.seq; ddbjhtg29.seq;
ddbjhtg3.seq; ddbjhtg30.seq; ddbjhtg31.seq; ddbjhtg32.seq;
ddbjhtg33.seq; ddbjhtg34.seq; ddbjhtg35.seq; ddbjhtg36.seq;
ddbjhtg37.seq; ddbjhtg38.seq; ddbjhtg39.seq; ddbjhtg4.seq;
ddbjhtg40.seq; ddbjhtg41.seq; ddbjhtg42.seq; ddbjhtg43.seq;
ddbjhtg44.seq; ddbjhtg45.seq; ddbjhtg46.seq; ddbjhtg47.seq;
ddbjhtg48.seq; ddbjhtg49.seq; ddbjhtg5.seq; ddbjhtg50.seq;
ddbjhtg51.seq; ddbjhtg52.seq; ddbjhtg6.seq; ddbjhtg7.seq;
ddbjhtg8.seq; ddbjhtg9.seq; /db/DDBJNEW.DATA/a/new_ddbjhtg1.seq;
ddbjpat1.seq; ddbjpat2.seq; ddbjpat3.seq; ddbjpat4.seq; ddbjpat5.seq;
ddbjpat6.seq; ddbjpat7.seq; ddbjpat8.seq;
/db/DDBJNEW.DATA/a/new_ddbjpat.seq; ddbjsts1.seq; ddbjsts2.seq;
ddbjsts3.seq; /db/DDBJNEW.DATA/a/new_ddbjsts.seq; ddbjsyn.seq;
/db/DDBJNEW.DATA/a/new_ddbjsyn.seq; est_atha1.seq;
/db/DDBJNEW.DATA/a/new_est_atha1.seq; est_btra1.seq;
/db/DDBJNEW.DATA/a/new_est_btra1.seq; est_cele1.seq; est_crei1.seq;
/db/DDBJNEW.DATA/a/new_est_crei1.seq; est_cint1.seq; est_drer1.seq;
/db/DDBJNEW.DATA/a/new_est_drer1.seq; est_dmel1.seq;
/db/DDBJNEW.DATA/a/new_est_dmel1.seq; est_ggal1.seq;
/db/DDBJNEW.DATA/a/new_est_ggal1.seq; est_gmax1.seq;
/db/DDBJNEW.DATA/a/new_est_gmax1.seq; est_hum1.seq; est_hum2.seq;
est_hum3.seq; est_hum4.seq; /db/DDBJNEW.DATA/a/new_est_hum1.seq;
est_hvul1.seq; /db/DDBJNEW.DATA/a/new_est_hvul1.seq; est_lesc1.seq;
est_mous1.seq; est_mous2.seq; est_mous3.seq;
/db/DDBJNEW.DATA/a/new_est_mous1.seq; est_mtru1.seq; est_osat1.seq;
/db/DDBJNEW.DATA/a/new_est_osat1.seq; est_rnor1.seq;
/db/DDBJNEW.DATA/a/new_est_rnor1.seq; est_stro1.seq;
/db/DDBJNEW.DATA/a/new_est_stro1.seq; est_taes1.seq;
/db/DDBJNEW.DATA/a/new_est_taes1.seq; est_xlae1.seq;
/db/DDBJNEW.DATA/a/new_est_xlae1.seq; est_zmay1.seq;
/db/DDBJNEW.DATA/a/new_est_zmay1.seq; est_rest1.seq; est_rest2.seq;
/db/DDBJNEW.DATA/a/new_est_rest1.seq
30,114,504 sequences; S,516,891,100 total letters
Searching....................................................done
Score E
Sequences producing significant alignments: (bits) Value N
AC115296|AC115296.5 Mus musculus BAC clone RP23-195I8 from 1... 34 0.015 11
AC116984|AC116984.2 Dictyostelium discoideum chromosome 2 ma... 44 0.017 20
AL732399|AL732399.11 Mouse DNA sequence from clone RP23-311A... 38 0.020 9
AC102058|AC102058.3 Mus musculus clone RP23-311A22, WORKING ... 38 0.056 11
AC106303|AC106303.5 Rattus norvegicus clone CH230-99C14, ***... 50 0.078 1
AC109773|AC109773.4 Rattus norvegicus clone CH230-86J2, *** ... 50 0.078 1
AL844507|AL844507.1 Plasmodium falciparum chromosome 8. 34 0.082 22
AC122028|AC122028.3 Mus musculus chromosome 2 clone RP24-394... 34 0.16 8
AC122430|AC122430.4 Mus musculus BAC clone RP24-176F14 from ... 32 0.21 11
AC116956|AC116956.2 Dictyostelium discoideum chromosome 2 ma... 36 0.23 12
AL772408|AL772408.4 Mouse DNA sequence from clone RP23-339B2... 34 0.28 10
BZ439413|BZ439413.1 BONNE28TR BO_1.6_2_KB_tot Brassica olera... 48 0.31 1
AL365276|AL365276.9 Human DNA sequence from clone RP11-274C1... 32 0.31 11
AC115577|AC115577.2 Dictyostelium discoideum chromosome 2 ma... 32 0.45 13
AC147111|AC147111.1 Mus musculus chromosome UNK clone RP24-1... 34 0.57 8
AE014820|AE014820.1 Plasmodium falciparum 3D7 chromosome 14 ... 36 0.88 10
AC012456|AC012456.10 Homo sapiens BAC clone RP11-484O9 from ... 38 0.89 7
AC110450|AC110450.4 Rattus norvegicus clone CH230-32D8, *** ... 38 0.95 8
AC079535|AC079535.1 Mus musculus clone RP23-349N11, WORKING ... 40 0.99 7
AC117075|AC117075.2 Dictyostelium discoideum chromosome 2 ma... 36 1.2 12
AC129365|AC129365.3 Rattus norvegicus clone CH230-186A6, WOR... 46 1.2 1
AC101490|AC101490.8 Mus musculus chromosome 3, clone RP23-18... 46 1.2 1
AC119094|AC119094.3 Rattus norvegicus clone CH230-181E9, ***... 46 1.2 1
AC094459|AC094459.6 Rattus norvegicus clone CH230-4D4, *** S... 46 1.2 1
AL929354|AL929354.1 Plasmodium falciparum strain 3D7, chromo... 46 1.2 14
AL928730|AL928730.7 Mouse DNA sequence from clone RP23-186A1... 34 1.3 7
AC107454|AC107454.11 Mus musculus chromosome 3, clone RP23-3... 34 1.4 9
AC023579|AC023579.3 Homo sapiens clone RP11-33A9, WORKING DR... 32 1.4 9
AL354715|AL354715.10 Human DNA sequence from clone RP11-110G... 38 1.5 7
AC130974|AC130974.3 Rattus norvegicus clone CH230-48D16, WOR... 30 1.5 12
AB042234|AB042234.1 Homo sapiens genomic DNA, chromosome 6q2... 32 1.6 9
AC132470|AC132470.3 Mus musculus chromosome 14 clone RP23-96... 32 1.6 9
AC145587|AC145587.1 Mus musculus chromosome UNK clone RP24-3... 34 1.7 7
J01477|J01477.1 Yeast (S.cerevisiae) mitochondrial cox1 gene... 32 1.7 5
AC116453|AC116453.3 Mus musculus clone RP24-299G8, WORKING D... 34 1.9 8
AC016080|AC016080.5 Homo sapiens, clone RP11-23N14, complete... 40 1.9 9
AL672146|AL672146.9 Mouse DNA sequence from clone RP23-390P1... 32 1.9 11
AL928728|AL928728.9 Zebrafish DNA sequence from clone CH211-... 40 2.0 10
AL845159|AL845159.4 Mouse DNA sequence from clone RP23-263O2... 34 2.1 7
AP003192|AP003192.2 Clostridium perfringens str. 13 DNA, com... 32 2.2 2
AL049691|AL049691.18 Human DNA sequence from clone RP5-1123D... 38 2.3 7
AL606926|AL606926.6 Mouse DNA sequence from clone RP23-231M4... 40 2.3 4
AF404306|AF404306.1 Rhizophydium sp. 136 mitochondrion, comp... 32 2.3 8
AC012410|AC012410.10 Homo sapiens chromosome 8, clone RP11-3... 40 2.4 9
AL158143|AL158143.14 Human DNA sequence from clone RP5-1074I... 34 2.5 3
AC122253|AC122253.3 Mus musculus chromosome UNK clone RP23-1... 38 2.6 6
BM884644|BM884644.1 rc13e02.y1 Meloidogyne hapla egg pAMP1 v... 38 2.7 2
BX180462|BX180462.1 Danio rerio genomic clone DKEY-184O19, g... 30 2.7 4
AC101961|AC101961.3 Mus musculus clone RP24-212A21, WORKING ... 34 2.8 8
AC144988|AC144988.2 Gorilla gorilla gorilla clone CH255-209M... 40 2.9 5
AL357932|AL357932.15 Human DNA sequence from clone RP11-435N... 40 3.0 7
AC111009|AC111009.3 Mus musculus chromosome UNK clone RP23-4... 32 3.1 9
AX346589|AX346589.1 Sequence 1660 from Patent WO0200928. 32 3.2 5
AL772395|AL772395.12 Mouse DNA sequence from clone RP23-39O1... 34 3.2 7
AQ833612|AQ833612.1 HS_5441_A1_C08_T7A RPCI-11 Human Male BA... 38 3.2 2
AC105957|AC105957.3 Mus musculus clone RP24-303O20, WORKING ... 36 3.3 9
AC006403|AC006403.4 Arabidopsis thaliana chromosome 2 clone ... 32 3.4 9
AC127696|AC127696.4 Mus musculus BAC clone RP23-459J11 from ... 38 3.4 8
CE595117|CE595117.1 tigr-gss-dog-17000366537074 Dog Library ... 34 3.5 2
AC132110|AC132110.1 Mus musculus chromosome UNK clone RP24-1... 34 3.6 9
AC116919|AC116919.2 Dictyostelium discoideum chromosome 2 ma... 34 3.6 5
AC122937|AC122937.2 Mus musculus chromosome UNK clone RP23-2... 32 3.6 11
BQ524607|BQ524607.1 NISC_no06b02.x1 NICHD_XGC_Emb8 Silurana ... 36 3.7 2
AC093729|AC093729.2 Homo sapiens BAC clone RP11-11N6 from 4,... 34 3.9 11
AC093084|AC093084.4 Homo sapiens BAC clone RP11-699O7 from 2... 38 4.0 9
AE015944|AE015944.1 Clostridium tetani E88, section 9 of 10 ... 34 4.1 13
AC099253|AC099253.6 Rattus norvegicus clone CH230-202N20, **... 34 4.1 6
AL356783|AL356783.20 Human DNA sequence *** SEQUENCING CANCE... 32 4.1 8
AP006201|AP006201.1 Homo sapiens genomic DNA, chromosome 6, ... 32 4.6 10
AC113123|AC113123.8 Mus musculus chromosome 8, clone RP23-34... 30 4.7 13
AC110193|AC110193.4 Mus musculus clone RP23-236N16, WORKING ... 34 4.7 8
AP004172|AP004172.1 Mycoplasma penetrans genomic DNA, comple... 44 4.8 1
AC097665|AC097665.7 Rattus norvegicus clone CH230-86C24, WOR... 44 4.8 1
AC111838|AC111838.7 Rattus norvegicus clone CH230-170E2, WOR... 44 4.8 1
BB636999|BB636999.1 Mus musculus adult male aorta and vein c... 44 4.8 1
AC115427|AC115427.6 Rattus norvegicus clone CH230-207B16, WO... 44 4.8 1
BZ638741|BZ638741.1 OGCAL72TC ZM_0.7_1.5_KB Zea mays genomic... 44 4.8 1
CE617151|CE617151.1 tigr-gss-dog-17000327691196 Dog Library ... 44 4.8 1
AC006442|AC006442.1 Homo sapiens, clone hRPK.7_A_1, complete... 44 4.8 1
BU033993|BU033993.1 QHJ2M17.yg.ab1 QH_EFGHJ sunflower RHA280... 44 4.8 1
AQ104135|AQ104135.1 HS_3109_A2_E06_T7 CIT Approved Human Gen... 44 4.8 1
AC108206|AC108206.3 Homo sapiens BAC clone RP11-203B7 from 4... 44 4.8 1
AL139000|AL139000.9 Human DNA sequence from clone RP11-173M1... 44 4.8 1
AC133492|AC133492.10 Rattus norvegicus clone rp32-478o16, co... 44 4.8 1
AX281498|AX281498.1 Sequence 162 from Patent WO0177376. 34 5.1 6
AC112467|AC112467.5 Rattus norvegicus clone CH230-127O13, WO... 36 5.2 7
AP003420|AP003420.2 Homo sapiens genomic DNA, chromosome 11q... 34 5.3 7
BX284634|BX284634.8 Mouse DNA sequence from clone RP23-92B18... 36 5.3 10
AL929156|AL929156.10 Mouse DNA sequence from clone RP23-475H... 34 5.4 10
AC116459|AC116459.8 Mus musculus, clone RP23-35F4, complete ... 32 5.8 9
AC114584|AC114584.5 Mus musculus clone RP23-282K7, WORKING D... 34 5.8 9
AC137875|AC137875.3 Mus musculus clone RP23-62B15, WORKING D... 42 5.8 6
AC034260|AC034260.2 Homo sapiens clone RP11-10J15, WORKING D... 34 5.9 8
AC129154|AC129154.2 Rattus norvegicus clone CH230-116G13, **... 40 5.9 7
AC025893|AC025893.2 Homo sapiens chromosome 13 clone RP11-61... 30 6.0 9
AL928569|AL928569.3 Human DNA sequence *** SEQUENCING CANCEL... 36 6.0 4
AC012392|AC012392.1 Genomic Sequence For Arabidopsis thalian... 32 6.2 11
AC007352|AC007352.8 Drosophila melanogaster chromosome 2 clo... 38 6.2 8
AC133476|AC133476.2 Homo sapiens 3 BAC RP11-73O12 (Roswell P... 36 6.5 5
AC116843|AC116843.2 Mus musculus clone RP24-392E16, WORKING ... 34 6.6 7
>AC115296|AC115296.5 Mus musculus BAC clone RP23-195I8 from 12, complete
sequence.
Length = 211414
Score = 34.2 bits (17), Expect(11) = 0.015
Identities = 17/17 (100%)
Strand = Plus / Minus
Query: 721 ttgcaattccaccaaca 737
|||||||||||||||||
Sbjct: 117799 ttgcaattccaccaaca 117783
Score = 34.2 bits (17), Expect(11) = 0.015
Identities = 17/17 (100%)
Strand = Plus / Plus
Query: 721 ttgcaattccaccaaca 737
|||||||||||||||||
Sbjct: 108321 ttgcaattccaccaaca 108337
Score = 30.2 bits (15), Expect(11) = 0.015
Identities = 21/23 (91%)
Strand = Plus / Minus
Query: 211 gtacacataaatatttaaaagaa 233
||||| ||| |||||||||||||
Sbjct: 136640 gtacatatacatatttaaaagaa 136618
Score = 30.2 bits (15), Expect(11) = 0.015
Identities = 15/15 (100%)
Strand = Plus / Plus
Query: 224 tttaaaagaattatg 238
|||||||||||||||
Sbjct: 10074 tttaaaagaattatg 10088
Score = 30.2 bits (15), Expect(11) = 0.015
Identities = 15/15 (100%)
Strand = Plus / Plus
Query: 787 aactcactcaaagaa 801
|||||||||||||||
Sbjct: 110775 aactcactcaaagaa 110789
Score = 28.2 bits (14), Expect(11) = 0.015
Identities = 14/14 (100%)
Strand = Plus / Plus
Query: 1269 aaagaaattaaaga 1282
||||||||||||||
Sbjct: 116725 aaagaaattaaaga 116738
Score = 28.2 bits (14), Expect(11) = 0.015
Identities = 14/14 (100%)
Strand = Plus / Plus
Query: 441 tcaaaggaatatga 454
||||||||||||||
Sbjct: 73414 tcaaaggaatatga 73427
Score = 28.2 bits (14), Expect(11) = 0.015
Identities = 14/14 (100%)
Strand = Plus / Plus
Query: 341 aaataagagttata 354
||||||||||||||
Sbjct: 46289 aaataagagttata 46302
Score = 26.3 bits (13), Expect(11) = 0.015
Identities = 13/13 (100%)
Strand = Plus / Plus
Query: 358 tagaaggattatt 370
|||||||||||||
Sbjct: 63458 tagaaggattatt 63470
Score = 26.3 bits (13), Expect(11) = 0.015
Identities = 13/13 (100%)
Strand = Plus / Minus
Query: 107 tttaaatgtaatg 119
|||||||||||||
Sbjct: 139334 tttaaatgtaatg 139322
Score = 26.3 bits (13), Expect(11) = 0.015
Identities = 13/13 (100%)
Strand = Plus / Minus
Query: 338 tttaaataagagt 350
|||||||||||||
Sbjct: 118946 tttaaataagagt 118934
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Number of Hits to DB: 33,696,035
Number of Sequences: 30114504
Number of extensions: 33696035
Number of successful extensions: 2710498
Number of sequences better than 10.0: 355
length of query: 1327
length of database: S,516,891,100
effective HSP length: 23
effective length of query: 1304
effective length of database: R,824,257,508
effective search space: 45410831790432
effective search space used: 45410831790432
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 21 (42.1 bits)
[blastall] WARNING: [000.000] Reached max 400 HSPs in BlastSaveCurrentHsp, continuing with this limit
ANTI-DNA BLAST search was processed by blast@nig.ac.jp, National Institute of Genetics, Japan.
Dictyostelium discoideum cDNA Project Home