Dictyostelium discoideum cDNA Clone CFI387

Sequence CFI387

---------- GGTCATTTAC AAACATTAGG TGCTGATAAG AAAGCATTGG
CAGGTTTTAG TGGTATGTCA AATAGAAAGT TTCAAATGGG TTTAATTTCA
CAATGTGATA TTGTAAAGAA AGCACCACCA TTCTTACAAG TTAAAGCATT
ACGTACTCTA ACTGGTAGAG TATCGATTGC TGCAAGAGTT GATGCTCAAC
AAGATTCATC ATTCTATGGT GAAACAGGTA GACAATATCG TGATGAAATT
TTAGCTAAAA TTGAGAAATG GCAAGAACCA CCACCTCAAA AACAAGATAA
AGCACTACCT GCCCCTGAAG AGGGTAAGAG AACCAAGAGA GGTGGTAAAA
AGGCTAGACT ATACAAACAG AAATATGGTG TCACCGATTT TCAAAAAGCT
AAAAATCGTA TGTCCTTTGG TGTTGAAGAG AAAACTATAG GTGAAAGTGG
TATTGGTTTA GGTATGATTG GTGGTGAAAG TGGTAAAGTA AGACTGGTTG
CTCAAGAAAG AGGTATCCTA AAGAAAAAGA AATTGGAACA AAAAAATTAT
GGTGGTTCTA TGACTTCTGC TTCAACTAGT GGTCTTGCAA GTGTTGCCAT
TACTCCTGTT CACNGCTCCN CANTGNATGT TGCC

Translated Amino Acid Sequence CFI387

---HLQTLGADKKALAGFSGMSNRKFQMGLISQCDIVKKAPPFLQVKALRTLTGRVSIAA
RVDAQQDSSFYGETGRQYRDEILAKIEKWQEPPPQKQDKALPAPEEGKRTKRGGKKARLY
KQKYGVTDFQKAKNRMSFGVEEKTIGESGIGLGMIGGESGKVRLVAQERGILKKKKLEQK
NYGGSMTSASTSGLASVAITPVHXSXXXVA

Homology CFI387 vs CSM-cDNA

Sequences producing significant alignments:                      (bits) Value


CFI387 (CFI387Q) /CSM/CF/CFI3-D/CFI387Q.Seq.d/                       1172   0.0
AFO514 (AFO514Q) /CSM/AF/AFO5-A/AFO514Q.Seq.d/                       1146   0.0
SFG687 (SFG687Q) /CSM/SF/SFG6-D/SFG687Q.Seq.d/                       1132   0.0
SFC337 (SFC337Q) /CSM/SF/SFC3-B/SFC337Q.Seq.d/                       1132   0.0
AFA686 (AFA686Q) /CSM/AF/AFA6-D/AFA686Q.Seq.d/                       1057   0.0
SFB226 (SFB226Q) /CSM/SF/SFB2-B/SFB226Q.Seq.d/                        892   0.0
VFO364 (VFO364Q) /CSM/VF/VFO3-C/VFO364Q.Seq.d/                        751   0.0
AFI509 (AFI509Q) /CSM/AF/AFI5-A/AFI509Q.Seq.d/                        712   0.0
AFA415 (AFA415Q) /CSM/AF/AFA4-A/AFA415Q.Seq.d/                        615   e-175
SFB332 (SFB332Q) /CSM/SF/SFB3-B/SFB332Q.Seq.d/                        222   5e-57

Homology CFI387 vs DNA

Sequences producing significant alignments:                  (bits) Value  N


M24734|M24734.1 Reovirus serotype 1 minor core protein lambd...    54   0.002  1
M31058|M31058.1 Reovirus serotype 3 minor core protein lambd...    54   0.002  1
AF083622|AF083622.1 Rickettsia typhi RNA polymerase beta sub...    48   0.15   1
AF035659|AF035659.1 Rickettsia typhi DNA-dependent RNA polym...    48   0.15   1
AV564043|AV564043.1 Arabidopsis thaliana cDNA clone:SQ198a01...    40   0.16   2
AV561743|AV561743.1 Arabidopsis thaliana cDNA clone:SQ156g03...    40   0.22   2
AC013285|AC013285.10 Homo sapiens chromosome 10 clone RP11-1...    40   0.24   7
AP003194|AP003194.2 Clostridium perfringens str. 13 DNA, com...    36   0.33   8
BD268175|BD268175.1 Gene to be the target for herbicide and ...    40   0.55   2
AR210004|AR210004.1 Sequence 3 from patent US 6387637.             40   0.55   2

Homology CFI387 vs Protein

Sequences producing significant alignments:                      (bits) Value


AC150800_1(AC150800|pid:none) Medicago truncatula chromosome 7 c...   124   3e-27
AP004010_10(AP004010|pid:none) Oryza sativa Japonica Group genom...   114   4e-24
BT036493_1(BT036493|pid:none) Zea mays full-length cDNA clone ZM...   113   6e-24
BT054842_1(BT054842|pid:none) Zea mays full-length cDNA clone ZM...   113   6e-24
AK066109_1(AK066109|pid:none) Oryza sativa Japonica Group cDNA c...   112   1e-23
CP000584_134(CP000584|pid:none) Ostreococcus lucimarinus CCE9901...   108   2e-22
CP001575_252(CP001575|pid:none) Micromonas sp. RCC299 chromosome...   105   2e-21
CR954202_367(CR954202|pid:none) Ostreococcus tauri strain OTTH05...   103   8e-21
(Q8WWY3) RecName: Full=U4/U6 small nuclear ribonucleoprotein Prp...    99   2e-19
AY040822_1(AY040822|pid:none) Homo sapiens U4/U6 snRNP-associate...    99   2e-19

Homology CFI387 vs Genome