Dictyostelium discoideum cDNA Clone CFH657

Sequence CFH657

ATGCAATATA CATATAATTG AAAATTGATT TTTATNACAA TCAATATTTT
TGTGAATTTT TTTGTTTGAA ATTATTATTT TTTTTTTGTT AAAGAAGCTT
TTAGGATTAA TAAAGCACAA TTACAAATCC CAGTAACATT ACAAATAATT
CTACTTCTTC AAAAGTAAAT TATNCAAAGA TGGAACAAGC NCCAAATTCA
TCATCAATCC GTGAATCGGG TATTGGCGGT GGTGGTGGTG GTGGTGGTGG
TGGTAATGAT AAAGATGAAA TGGATGGATC CACTGCAATT CCAATGGAGC
CAATGACATC ATCATCAGGT GTAAGTAGTG GNGGTGGNGG NAAAGTNGNA
TCCCACTTTT TATTAGAAGA AGATTTTGNT NGCANGAAAN GATTCACA--
--------CC TACAGGAGAT GACCACCAAA AGCATTGGAT TTAATCTCAC
AAAAACAATG AAAATGGTTT CTTTTTAATG GTGGAAGGCT CAAAGATTGA
TGTGNCAGCT CATATCAATG ACGCACCCAC TCAGATTTGG GAGACTGATG
CATTTGATCA AACTTTTAAT CTAGTTAGAG AATGGGCAGA GAAGGATGGT
AATACCATTG TAATTGTGAC AGCAGATCAT GAAACTGGTG GTCTTACATT
AGCAAATCAA ATGGTTATCG ATGGTAATCC AAAATATTCA TGGTCACCAG
AGACATTATT GACAGTGAAT AAATCTGCTG ATCTCATGGC AGAACTTATC
AAAGGTGGTG CTGATCCAAC GAAATTGATT TTCGATAATA CAGGTTACAC
ATTAACATCA GATGATTTAA AAGAAATCAA TAGAACCAAG TCTGCCTATT
ATCTCAATCA AGTGATTGGT CGTATCGTTT CAAACTATGC TGATATTGGT
TTCACCACTG GTGGTCATAC TGGTGAGGAT GTCAATCTCT ACACCTTTGG
TGATACAATC TCTGAAGGTA AATTTGAAAC TCGTCTAAAA GATCATCAAA
CTGAAATAGT TGATAATTAT ATTGATCCAA TCTTAAGAGG TAATATAAAT
AATATAGATA TTGCTTCATT TATCATTAAA ACTTTAATTT AGAATTCAAT
CAATTACAGA ATCATTAAAA GATTTATTCC NAACCA

Translated Amino Acid Sequence CFH657

aiyi*lkidfyxnqyfceffclkllfffc*rsf*d**STITNPSNITNNSTSSKVNYXKM
EQAPNSSSIRESGIGGGGGGGGGGNDKDEMDGSTAIPMEPMTSSSGVSSGGGGKVXSHFL
LEEDFXXXKXFT---

---LQEMTTKSIGFNLTKTMKMVSF*wwkaqrlmxqlismthplrfgrlmhliklli*le
ngqrrmvipl*l*qqimklvvlh*qikwlsmviqnihghqrhy*q*inlliswqnlskvv
liqrn*fsiiqvth*hqmi*kksiepslpiisik*lvvsfqtmlilvsplvvilvrmsis
tplviqslkvnlklv*kiiklk*liiiliqs*evi*ii*illhlslkl*friqsiteslk
dlfxt

Homology CFH657 vs CSM-cDNA

Sequences producing significant alignments:                      (bits) Value


CFH657 (CFH657Q) /CSM/CF/CFH6-C/CFH657Q.Seq.d/                       1624   0.0
CHA434 (CHA434Q) /CSM/CH/CHA4-B/CHA434Q.Seq.d/                       1360   0.0
AFO754 (AFO754Q) /CSM/AF/AFO7-C/AFO754Q.Seq.d/                       1328   0.0
SFI109 (SFI109Q) /CSM/SF/SFI1-A/SFI109Q.Seq.d/                       1308   0.0
AFE792 (AFE792Q) /CSM/AF/AFE7-D/AFE792Q.Seq.d/                       1302   0.0
AFA863 (AFA863Q) /CSM/AF/AFA8-C/AFA863Q.Seq.d/                       1257   0.0
SSA425 (SSA425Q) /CSM/SS/SSA4-B/SSA425Q.Seq.d/                       1249   0.0
AFN772 (AFN772Q) /CSM/AF/AFN7-C/AFN772Q.Seq.d/                       1189   0.0
AFL482 (AFL482Q) /CSM/AF/AFL4-D/AFL482Q.Seq.d/                       1183   0.0
CHD578 (CHD578Q) /CSM/CH/CHD5-D/CHD578Q.Seq.d/                       1170   0.0

Homology CFH657 vs DNA

Sequences producing significant alignments:                  (bits) Value  N


AE017012|AE017012.1 Bacillus cereus ATCC 14579 section 15 of...    56   0.001  1
AF320303|AF320303.1 Lactobacillus delbrueckii subsp. bulgari...    56   0.001  1
AC116957|AC116957.2 Dictyostelium discoideum chromosome 2 ma...    32   0.003  17
AF063866|AF063866.1 Melanoplus sanguinipes entomopoxvirus, c...    36   0.018  13
AC074226|AC074226.3 Arabidopsis thaliana chromosome 1 clone ...    36   0.021  9
AC112800|AC112800.6 Rattus norvegicus X BAC CH230-275F1 (Chi...    38   0.044  5
AP003364|AP003364.2 Staphylococcus aureus subsp. aureus Mu50...    34   0.067  12
AL929354|AL929354.1 Plasmodium falciparum strain 3D7, chromo...    34   0.11   15
AR396635|AR396635.1 Sequence 2650 from patent US 6617156.          48   0.13   2
AF154110|AF154110.1 Enterococcus faecalis alkaline phosphata...    48   0.16   2

Homology CFH657 vs Protein

Sequences producing significant alignments:                      (bits) Value


CP002835_3193(CP002835|pid:none) Geobacillus thermoglucosidasius...   130   1e-28
FR821777_2421(FR821777|pid:none) Staphylococcus aureus subsp. au...   126   3e-27
FN392320_1245(FN392320|pid:none) Pichia pastoris GS115 chromosom...   123   2e-26
AF154110_1(AF154110|pid:none) Enterococcus faecalis alkaline pho...   118   5e-25
CP002491_59(CP002491|pid:none) Enterococcus faecalis 62, complet...   118   5e-25
AE016877_4146(AE016877|pid:none) Bacillus cereus ATCC 14579, com...   118   7e-25
CP001996_2575(CP001996|pid:none) Staphylococcus aureus subsp. au...   117   9e-25
CP001781_2572(CP001781|pid:none) Staphylococcus aureus subsp. au...   117   9e-25
CP000227_4029(CP000227|pid:none) Bacillus cereus Q1, complete ge...   117   1e-24
BA000033_2547(BA000033|pid:none) Staphylococcus aureus subsp. au...   117   2e-24

Homology CFH657 vs Genome