Homology CFH657 vs DNA
Query= CFH657 (CFH657Q) /CSM/CF/CFH6-C/CFH657Q.Seq.d/
(1136 letters)
Database: ddbjhum1.seq; ddbjhum10.seq; ddbjhum11.seq; ddbjhum12.seq;
ddbjhum13.seq; ddbjhum14.seq; ddbjhum15.seq; ddbjhum16.seq;
ddbjhum17.seq; ddbjhum18.seq; ddbjhum19.seq; ddbjhum2.seq;
ddbjhum20.seq; ddbjhum21.seq; ddbjhum3.seq; ddbjhum4.seq;
ddbjhum5.seq; ddbjhum6.seq; ddbjhum7.seq; ddbjhum8.seq; ddbjhum9.seq;
/db/DDBJNEW.DATA/b/new_ddbjhum.seq; ddbjpri.seq;
/db/DDBJNEW.DATA/b/new_ddbjpri.seq; ddbjrod1.seq; ddbjrod2.seq;
ddbjrod3.seq; ddbjrod4.seq; ddbjrod5.seq; ddbjrod6.seq; ddbjrod7.seq;
ddbjrod8.seq; ddbjrod9.seq; /db/DDBJNEW.DATA/b/new_ddbjrod.seq;
ddbjmam.seq; /db/DDBJNEW.DATA/b/new_ddbjmam.seq; ddbjvrt1.seq;
ddbjvrt2.seq; ddbjvrt3.seq; /db/DDBJNEW.DATA/b/new_ddbjvrt.seq;
ddbjinv1.seq; ddbjinv2.seq; ddbjinv3.seq; ddbjinv4.seq; ddbjinv5.seq;
/db/DDBJNEW.DATA/b/new_ddbjinv.seq; ddbjpln1.seq; ddbjpln2.seq;
ddbjpln3.seq; ddbjpln4.seq; ddbjpln5.seq; ddbjpln6.seq; ddbjpln7.seq;
ddbjpln8.seq; /db/DDBJNEW.DATA/b/new_ddbjpln.seq; ddbjbct1.seq;
ddbjbct2.seq; ddbjbct3.seq; ddbjbct4.seq; ddbjbct5.seq; ddbjbct6.seq;
ddbjbct7.seq; /db/DDBJNEW.DATA/b/new_ddbjbct.seq; ddbjvrl1.seq;
ddbjvrl2.seq; ddbjvrl3.seq; /db/DDBJNEW.DATA/b/new_ddbjvrl.seq;
ddbjphg.seq; /db/DDBJNEW.DATA/b/new_ddbjphg.seq; ddbjuna.seq;
/db/DDBJNEW.DATA/b/new_ddbjuna.seq; ddbjgss1.seq; ddbjgss10.seq;
ddbjgss11.seq; ddbjgss12.seq; ddbjgss13.seq; ddbjgss14.seq;
ddbjgss15.seq; ddbjgss16.seq; ddbjgss17.seq; ddbjgss18.seq;
ddbjgss19.seq; ddbjgss2.seq; ddbjgss20.seq; ddbjgss21.seq;
ddbjgss22.seq; ddbjgss23.seq; ddbjgss24.seq; ddbjgss25.seq;
ddbjgss26.seq; ddbjgss27.seq; ddbjgss28.seq; ddbjgss29.seq;
ddbjgss3.seq; ddbjgss30.seq; ddbjgss31.seq; ddbjgss32.seq;
ddbjgss33.seq; ddbjgss34.seq; ddbjgss35.seq; ddbjgss36.seq;
ddbjgss37.seq; ddbjgss38.seq; ddbjgss39.seq; ddbjgss4.seq;
ddbjgss40.seq; ddbjgss41.seq; ddbjgss42.seq; ddbjgss43.seq;
ddbjgss44.seq; ddbjgss45.seq; ddbjgss46.seq; ddbjgss47.seq;
ddbjgss48.seq; ddbjgss49.seq; ddbjgss5.seq; ddbjgss50.seq;
ddbjgss51.seq; ddbjgss52.seq; ddbjgss53.seq; ddbjgss54.seq;
ddbjgss55.seq; ddbjgss56.seq; ddbjgss57.seq; ddbjgss58.seq;
ddbjgss59.seq; ddbjgss6.seq; ddbjgss60.seq; ddbjgss61.seq;
ddbjgss62.seq; ddbjgss63.seq; ddbjgss64.seq; ddbjgss65.seq;
ddbjgss66.seq; ddbjgss67.seq; ddbjgss68.seq; ddbjgss69.seq;
ddbjgss7.seq; ddbjgss70.seq; ddbjgss71.seq; ddbjgss72.seq;
ddbjgss73.seq; ddbjgss74.seq; ddbjgss75.seq; ddbjgss8.seq;
ddbjgss9.seq; /db/DDBJNEW.DATA/b/new_ddbjgss1.seq;
/db/DDBJNEW.DATA/b/new_ddbjgss2.seq; ddbjhtg1.seq; ddbjhtg10.seq;
ddbjhtg11.seq; ddbjhtg12.seq; ddbjhtg13.seq; ddbjhtg14.seq;
ddbjhtg15.seq; ddbjhtg16.seq; ddbjhtg17.seq; ddbjhtg18.seq;
ddbjhtg19.seq; ddbjhtg2.seq; ddbjhtg20.seq; ddbjhtg21.seq;
ddbjhtg22.seq; ddbjhtg23.seq; ddbjhtg24.seq; ddbjhtg25.seq;
ddbjhtg26.seq; ddbjhtg27.seq; ddbjhtg28.seq; ddbjhtg29.seq;
ddbjhtg3.seq; ddbjhtg30.seq; ddbjhtg31.seq; ddbjhtg32.seq;
ddbjhtg33.seq; ddbjhtg34.seq; ddbjhtg35.seq; ddbjhtg36.seq;
ddbjhtg37.seq; ddbjhtg38.seq; ddbjhtg39.seq; ddbjhtg4.seq;
ddbjhtg40.seq; ddbjhtg41.seq; ddbjhtg42.seq; ddbjhtg43.seq;
ddbjhtg44.seq; ddbjhtg45.seq; ddbjhtg46.seq; ddbjhtg47.seq;
ddbjhtg48.seq; ddbjhtg49.seq; ddbjhtg5.seq; ddbjhtg50.seq;
ddbjhtg51.seq; ddbjhtg6.seq; ddbjhtg7.seq; ddbjhtg8.seq; ddbjhtg9.seq;
/db/DDBJNEW.DATA/b/new_ddbjhtg1.seq; ddbjpat1.seq; ddbjpat2.seq;
ddbjpat3.seq; ddbjpat4.seq; ddbjpat5.seq; ddbjpat6.seq; ddbjpat7.seq;
ddbjpat8.seq; ddbjpat9.seq; /db/DDBJNEW.DATA/b/new_ddbjpat.seq;
ddbjsts1.seq; ddbjsts2.seq; ddbjsts3.seq;
/db/DDBJNEW.DATA/b/new_ddbjsts.seq; ddbjsyn.seq;
/db/DDBJNEW.DATA/b/new_ddbjsyn.seq; est_atha1.seq;
/db/DDBJNEW.DATA/b/new_est_atha1.seq; est_btra1.seq;
/db/DDBJNEW.DATA/b/new_est_btra1.seq; est_cele1.seq;
/db/DDBJNEW.DATA/b/new_est_cele1.seq; est_crei1.seq; est_cint1.seq;
/db/DDBJNEW.DATA/b/new_est_cint1.seq; est_drer1.seq;
/db/DDBJNEW.DATA/b/new_est_drer1.seq; est_dmel1.seq;
/db/DDBJNEW.DATA/b/new_est_dmel1.seq; est_ggal1.seq;
/db/DDBJNEW.DATA/b/new_est_ggal1.seq; est_gmax1.seq;
/db/DDBJNEW.DATA/b/new_est_gmax1.seq; est_hum1.seq; est_hum2.seq;
est_hum3.seq; est_hum4.seq; /db/DDBJNEW.DATA/b/new_est_hum1.seq;
est_hvul1.seq; /db/DDBJNEW.DATA/b/new_est_hvul1.seq; est_lesc1.seq;
/db/DDBJNEW.DATA/b/new_est_lesc1.seq; est_mous1.seq; est_mous2.seq;
est_mous3.seq; /db/DDBJNEW.DATA/b/new_est_mous1.seq; est_mtru1.seq;
/db/DDBJNEW.DATA/b/new_est_mtru1.seq; est_osat1.seq;
/db/DDBJNEW.DATA/b/new_est_osat1.seq; est_rnor1.seq;
/db/DDBJNEW.DATA/b/new_est_rnor1.seq; est_stro1.seq; est_taes1.seq;
/db/DDBJNEW.DATA/b/new_est_taes1.seq; est_xlae1.seq;
/db/DDBJNEW.DATA/b/new_est_xlae1.seq; est_zmay1.seq;
/db/DDBJNEW.DATA/b/new_est_zmay1.seq; est_rest1.seq; est_rest2.seq;
est_rest3.seq; /db/DDBJNEW.DATA/b/new_est_rest1.seq
31,834,761 sequences; U,147,504,287 total letters
Searching....................................................done
Score E
Sequences producing significant alignments: (bits) Value N
AE017012|AE017012.1 Bacillus cereus ATCC 14579 section 15 of... 56 0.001 1
AF320303|AF320303.1 Lactobacillus delbrueckii subsp. bulgari... 56 0.001 1
AC116957|AC116957.2 Dictyostelium discoideum chromosome 2 ma... 32 0.003 17
AF063866|AF063866.1 Melanoplus sanguinipes entomopoxvirus, c... 36 0.018 13
AC074226|AC074226.3 Arabidopsis thaliana chromosome 1 clone ... 36 0.021 9
AC112800|AC112800.6 Rattus norvegicus X BAC CH230-275F1 (Chi... 38 0.044 5
AP003364|AP003364.2 Staphylococcus aureus subsp. aureus Mu50... 34 0.067 12
AL929354|AL929354.1 Plasmodium falciparum strain 3D7, chromo... 34 0.11 15
AR396635|AR396635.1 Sequence 2650 from patent US 6617156. 48 0.13 2
AF154110|AF154110.1 Enterococcus faecalis alkaline phosphata... 48 0.16 2
AC113709|AC113709.5 Rattus norvegicus clone CH230-55C1, *** ... 36 0.17 7
AB063521|AB063521.2 Wigglesworthia glossinidia endosymbiont ... 36 0.17 14
U88974|U88974.1 Streptococcus thermophilus temperate bacteri... 38 0.21 4
AC116305|AC116305.2 Dictyostelium discoideum chromosome 2 ma... 32 0.22 16
AF158600|AF158600.2 Streptococcus thermophilus bacteriophage... 38 0.27 3
AE016956|AE016956.1 Enterococcus faecalis V583, section 10 o... 48 0.27 1
BD193800|BD193800.1 Enterococcus faecialis polynucleotides a... 48 0.27 1
AF167172|AF167172.1 Cloning vector pDC123, complete sequence. 48 0.27 1
BD191752|BD191752.1 Enterococcus Faecalis polynucleotides an... 48 0.27 1
AR228497|AR228497.1 Sequence 107 from patent US 6448043. 48 0.27 1
BD191751|BD191751.1 Enterococcus Faecalis polynucleotides an... 48 0.27 1
AR228496|AR228496.1 Sequence 105 from patent US 6448043. 48 0.27 1
AY028776|AY028776.1 TnphoZ mutagenesis vector pMHL120, compl... 48 0.27 1
AL844505|AL844505.1 Plasmodium falciparum chromosome 6. 34 0.28 19
AC116984|AC116984.2 Dictyostelium discoideum chromosome 2 ma... 34 0.30 19
AC004153|AC004153.7 Plasmodium falciparum chromosome 12 clon... 38 0.32 8
AL929355|AL929355.1 Plasmodium falciparum strain 3D7, chromo... 36 0.33 13
AC005139|AC005139.3 Plasmodium falciparum chromosome 12, ***... 32 0.33 12
AC102972|AC102972.5 Rattus norvegicus clone CH230-42L18, WOR... 36 0.37 8
AF077306|AF077306.1 Streptococcus thermophilus bacteriophage... 38 0.47 2
AF004379|AF004379.1 Streptococcus thermophilus bacteriophage... 38 0.47 2
AC146790|AC146790.7 Medicago truncatula clone mth2-123b21, W... 36 0.50 8
AL929353|AL929353.1 Plasmodium falciparum strain 3D7, chromo... 36 0.51 9
AL513330|AL513330.9 Human DNA sequence *** SEQUENCING CANCEL... 36 0.54 9
BX649338|BX649338.2 Zebrafish DNA sequence *** SEQUENCING IN... 46 0.57 5
AC100496|AC100496.1 Mus musculus clone RP23-143E17, LOW-PASS... 36 0.57 3
AE014820|AE014820.1 Plasmodium falciparum 3D7 chromosome 14 ... 32 0.62 13
AE014826|AE014826.1 Plasmodium falciparum 3D7 chromosome 14 ... 34 0.66 9
AP003190|AP003190.2 Clostridium perfringens str. 13 DNA, com... 44 0.67 9
AL592203|AL592203.4 Human DNA sequence from clone RP11-268N1... 36 0.69 8
AX344984|AX344984.1 Sequence 55 from Patent WO0200928. 34 0.81 4
AX323515|AX323515.1 Sequence 3 from Patent WO0192565. 34 0.81 4
AX277840|AX277840.1 Sequence 3 from Patent WO0177375. 34 0.81 4
AC115310|AC115310.7 Rattus norvegicus clone CH230-40G15, WOR... 34 0.91 7
AC026515|AC026515.4 Homo sapiens chromosome 15 clone RP11-11... 36 0.91 5
AF115103|AF115103.1 Streptococcus thermophilus bacteriophage... 38 0.98 3
M36379|M36379.1 Yeast mitochondrial oxi3 gene, 3' end, ATPas... 32 1.0 4
AF158601|AF158601.1 Streptococcus thermophilus bacteriophage... 38 1.1 2
AL646056|AL646056.18 Mouse DNA sequence from clone RP23-412O... 46 1.1 1
CC405162|CC405162.1 PUHNG92TD ZM_0.6_1.0_KB Zea mays genomic... 46 1.1 1
AC138569|AC138569.2 Gallus gallus clone WAG-98K4, WORKING DR... 46 1.1 1
CG158626|CG158626.1 PUKAI90TB ZM_0.6_1.0_KB Zea mays genomic... 46 1.1 1
BZ408589|BZ408589.1 OGACZ81TC ZM_0.7_1.5_KB Zea mays genomic... 46 1.1 1
AC110173|AC110173.4 Mus musculus clone RP24-396D19, WORKING ... 40 1.1 5
AE015937|AE015937.1 Clostridium tetani E88, section 2 of 10 ... 34 1.1 13
AJ011856|AJ011856.1 Saccharomyces cerevisiae complete mitoch... 44 1.1 4
AL596172|AL596172.1 Listeria innocua Clip11262 complete geno... 34 1.2 8
AC098331|AC098331.5 Rattus norvegicus clone CH230-1P13, *** ... 36 1.4 6
AC107506|AC107506.5 Rattus norvegicus clone CH230-131I22, **... 36 1.6 6
AY082376|AY082376.1 Dictyostelium discoideum ABC transporter... 30 1.6 5
AC116977|AC116977.2 Dictyostelium discoideum chromosome 2 ma... 32 1.7 15
AC094426|AC094426.6 Rattus norvegicus clone CH230-3K10, *** ... 36 1.7 6
AC107550|AC107550.8 Rattus norvegicus clone CH230-45O10, WOR... 42 1.7 7
AE014841|AE014841.1 Plasmodium falciparum 3D7 chromosome 11 ... 30 1.8 13
AC114017|AC114017.4 Rattus norvegicus clone CH230-19H16, ***... 36 1.9 8
AC115592|AC115592.2 Dictyostelium discoideum chromosome 2 ma... 32 2.0 13
AE014819|AE014819.1 Plasmodium falciparum 3D7 chromosome 14 ... 32 2.1 12
AE014846|AE014846.1 Plasmodium falciparum 3D7 chromosome 12,... 32 2.2 12
AC114041|AC114041.4 Rattus norvegicus clone CH230-187A1, WOR... 36 2.2 7
AE014817|AE014817.1 Plasmodium falciparum 3D7 chromosome 14 ... 32 2.2 15
AC016501|AC016501.4 Homo sapiens clone RP11-5G9, WORKING DRA... 34 2.4 8
AC121530|AC121530.6 Mus musculus clone RP24-376O15, WORKING ... 40 2.4 7
AJ304285|AJ304285.1 Plasmodium chabaudi genome survey sequen... 36 2.5 2
AC130762|AC130762.3 Rattus norvegicus clone CH230-129L2, WOR... 36 2.5 9
AC129257|AC129257.3 Rattus norvegicus clone CH230-340M9, ***... 36 2.5 6
AC021068|AC021068.17 Homo sapiens 3 BAC RP11-48O22 (Roswell ... 34 2.6 10
AR409405|AR409405.1 Sequence 1 from patent US 6632935. 32 2.6 16
BD061520|BD061520.1 Genome DNA of symbiotic bacteria of aphid. 32 2.6 16
AF115102|AF115102.1 Streptococcus thermophilus bacteriophage... 38 2.9 3
AC134090|AC134090.2 Rattus norvegicus clone CH230-499J9, WOR... 36 3.1 3
BX294001|BX294001.8 Zebrafish DNA sequence *** SEQUENCING IN... 36 3.1 8
AC116956|AC116956.2 Dictyostelium discoideum chromosome 2 ma... 32 3.2 12
AC132753|AC132753.3 Rattus norvegicus clone CH230-380H8, ***... 32 3.6 8
AC107572|AC107572.4 Rattus norvegicus clone CH230-64C23, WOR... 36 3.7 10
AP006628|AP006628.1 Onion yellows phytoplasma DNA, complete ... 30 3.7 21
AC040906|AC040906.3 Homo sapiens chromosome 6 clone RP11-182... 36 3.7 7
BX537110|BX537110.3 Zebrafish DNA sequence *** SEQUENCING IN... 34 3.7 8
AL139074|AL139074.2 Campylobacter jejuni subsp. jejuni NCTC ... 32 4.1 12
AC128971|AC128971.4 Rattus norvegicus clone CH230-198H15, **... 36 4.2 8
AC107182|AC107182.4 Rattus norvegicus clone CH230-120M18, **... 44 4.3 1
AC122634|AC122634.5 Rattus norvegicus clone CH230-184D5, ***... 44 4.3 1
AC022958|AC022958.2 Homo sapiens chromosome 2 clone RP11-204... 44 4.3 1
BX130172|BX130172.1 Danio rerio genomic clone DKEY-91O23, ge... 44 4.3 1
BH404156|BH404156.1 AG-ND-133J8.TR ND-TAM Anopheles gambiae ... 44 4.3 1
BD142888|BD142888.1 Method of simple and quick determination... 44 4.3 1
AX399616|AX399616.1 Sequence 20 from Patent EP1191108. 44 4.3 1
X00149|X00149.1 Saccharomyces cerevisiae mt 21s rRNA gene r... 44 4.3 1
BX649586|BX649586.4 Zebrafish DNA sequence from clone CH211-... 44 4.3 1
AC109085|AC109085.4 Rattus norvegicus clone CH230-236F21, **... 44 4.3 1
AC104841|AC104841.6 Homo sapiens BAC clone RP11-475G3 from 2... 44 4.3 1
>AE017012|AE017012.1 Bacillus cereus ATCC 14579 section 15 of 18 of the
complete genome.
Length = 301332
Score = 56.0 bits (28), Expect = 0.001
Identities = 28/28 (100%)
Strand = Plus / Minus
Query: 461 aaaatggtttctttttaatggtggaagg 488
||||||||||||||||||||||||||||
Sbjct: 50173 aaaatggtttctttttaatggtggaagg 50146
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Number of Hits to DB: 28,600,915
Number of Sequences: 31834761
Number of extensions: 28600915
Number of successful extensions: 2193502
Number of sequences better than 10.0: 417
length of query: 1136
length of database: U,147,504,287
effective HSP length: 22
effective length of query: 1114
effective length of database: T,447,139,545
effective search space: 40602113453130
effective search space used: 40602113453130
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 21 (42.1 bits)
[blastall] WARNING: [000.000] Reached max 400 HSPs in BlastSaveCurrentHsp, continuing with this limit
ANTI-DNA BLAST search was processed by blast@nig.ac.jp, National Institute of Genetics, Japan.
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