Dictyostelium discoideum cDNA Clone CFH427

Sequence CFH427

AATTTATTTA TNCCAACACC TTCACCTTTT TTTTATACAT TAAACTAATA
TAATTTGTAA TTTAATTAGT TTTAATTTTT TTTTTTATAT TTTTATTTCC
TCATCAAAAC AAAACAATNT ATAGCAAAAT AAAANGAGAG AAATTGTNCA
AATTCAAGCA GGTCAATGNG GTAATCAAAT NGGTTCCAAA TTTTGGGAAG
TAATTTCTGA ANAACACGGT ATCCAAAGCG ATGGTTTCCA CNCTGGNGG-
---------C CGTACACTCA AACTCACCCA ACCAAACTAT GGTGATTTAA
ATCATCTCAT CTCATCAGTT ATGTCTGGTA TCACCTGTTG TCTTCGTTTC
CCAGGTCAAT TGAACTCTGA TCTTCGTAAA TTAGCTGTAA ATTTAATTCC
ATTCCCACGT CTTCACTTCT TTTTGGTTGG TTTCGCTCCA CTCACTGCCA
AAGGTGCCTC GTCATACAAT CGTATCACCG TACCAGAACT CACCCAACAA
ATGTTTGATG CCAAGAATAT GATGGCTGCT TCCGATCCAC ACAATGGTAA
ATACTTGACT GCCTCTGCTC TCTTTAGAGG TAAAATCTTC ACCAAGGAAG
TCGATGAACA AATGCACAAC ATTCAAACCA AAAATAGCAG TTACTTTGTC
GAATGGATTC CACACAACAT TAAATCCTCC ATTTGTGATA TCCCACCAAA
AGGTACCCCA ATGGCCGTCA CCTTCATCGG TAACAACACT GCCATCCAAG
ATCTCTTCAA ACGTATCTCA ATTCACTTCC AAGCTATGTT CCGTAGAAAG
GCTTTCCTTC ATTGGTACAC CCTCGAAGGT ATGGAAGAAT TGGAATTTAC
TGAAGCTGAA TCAAACATGA ACGATTTAGT TTACGAATAT CAACAATATT
CTAACCAAGA AACTGAAGAG GATGGTGGNA ATATCAAGAA GAACA

Translated Amino Acid Sequence CFH427

iylxqhlhlffih*tniicnlisfnfffyifissskqnnx*QNKXREIVQIQAGQXGNQX
GSKFWEVISEXHGIQSDGFHXG---

---RTLKLTQPNYGDLNHLISSVMSGITCCLRFPGQLNSDLRKLAVNLIPFPRLHFFLVG
FAPLTAKGASSYNRITVPELTQQMFDAKNMMAASDPHNGKYLTASALFRGKIFTKEVDEQ
MHNIQTKNSSYFVEWIPHNIKSSICDIPPKGTPMAVTFIGNNTAIQDLFKRISIHFQAMF
RRKAFLHWYTLEGMEELEFTEAESNMNDLVYEYQQYSNQETEEDGGNIKKN

Homology CFH427 vs CSM-cDNA

Sequences producing significant alignments:                      (bits) Value


CFH427 (CFH427Q) /CSM/CF/CFH4-B/CFH427Q.Seq.d/                       1641   0.0
VFC612 (VFC612Q) /CSM/VF/VFC6-A/VFC612Q.Seq.d/                       1346   0.0
VFI534 (VFI534Q) /CSM/VF/VFI5-B/VFI534Q.Seq.d/                       1330   0.0
VFC748 (VFC748Q) /CSM/VF/VFC7-B/VFC748Q.Seq.d/                       1324   0.0
SFK751 (SFK751Q) /CSM/SF/SFK7-C/SFK751Q.Seq.d/                       1316   0.0
SFC259 (SFC259Q) /CSM/SF/SFC2-C/SFC259Q.Seq.d/                       1312   0.0
VFM545 (VFM545Q) /CSM/VF/VFM5-B/VFM545Q.Seq.d/                       1279   0.0
VFI185 (VFI185Q) /CSM/VF/VFI1-D/VFI185Q.Seq.d/                       1279   0.0
VFF673 (VFF673Q) /CSM/VF/VFF6-D/VFF673Q.Seq.d/                       1249   0.0
SLH391 (SLH391Q) /CSM/SL/SLH3-D/SLH391Q.Seq.d/                       1138   0.0

Homology CFH427 vs DNA

Sequences producing significant alignments:                  (bits) Value  N


L14000|L14000.1 Dictyostelium discoideum beta tubulin (TUBB)...  1318   0.0    2
AF030823|AF030823.1 Dictyostelium discoideum beta tubulin ge...  1318   0.0    2
AF276947|AF276947.1 Polysphondylium violaceum beta-tubulin g...   182   e-136  4
X12768|X12768.1 Tetrahymena pyriformis beta-tubulin gene 1 (...    86   3e-78  9
CD088322|CD088322.1 MC1-0049T-M155-C01-U.B MC1-0049 Schistos...    80   4e-68  9
L01416|L01416.1 Tetrahymena thermophila beta-tubulin (BTU2) ...    78   2e-66  7
X81050|X81050.1 N.gruberi mRNA for beta-tubulin.                   94   3e-65  6
AF510209|AF510209.1 Uroleptus gallina beta-tubulin gene, com...    88   3e-64  8
CD431468|CD431468.1 ETH1_9_D12.b1_A002 Ethylene-treated seed...   119   1e-62  6
X12769|X12769.1 Tetrahymena pyriformis beta-tubulin gene 2 (...    78   8e-62  9

Homology CFH427 vs Protein

Sequences producing significant alignments:                      (bits) Value


(P32256) RecName: Full=Tubulin beta chain; AltName: Full=Beta-tu...   458   e-127
L14000_1(L14000|pid:none) Dictyostelium discoideum beta tubulin ...   458   e-127
AF182554_1(AF182554|pid:none) Euglena gracilis beta-tubulin mRNA...   375   e-102
A44848(A44848)beta 1A tubulin - slime mold (Physarum polycephalum)    374   e-102
AB576857_1(AB576857|pid:none) Tsukubamonas globosa mRNA for beta...   371   e-101
(P41352) RecName: Full=Tubulin beta chain; AltName: Full=Beta-tu...   371   e-101
(P34108) RecName: Full=Tubulin beta chain; AltName: Full=Beta-tu...   371   e-101
S01769(S01769)tubulin beta-2 chain - Tetrahymena pyriformis           370   e-101
X12769_1(X12769|pid:none) Tetrahymena pyriformis beta-tubulin ge...   370   e-101
JQ0120(JQ0120) tubulin beta chain - malaria parasite (Plasmodium...   369   e-100

Homology CFH427 vs Genome