Dictyostelium discoideum cDNA Clone CFF657

Sequence CFF657

ATTATTATTA AAATTTAAAT CACAAACGAA AGAAATAAAA CATGTCCGCA
AGTAATAAAG ATGACCAACT CATGAAAAAT GAGTTCGAAA GTACCTACGA
CAAAATTGTC GATTCATTCG ACAATATGGA GCTCCCAAAG GATCTCTTAA
GAGGTATCTA CTCCTATGGT TTTGAAAAGC CATCAGCCAT CCAACAAAGA
GCTATCATTC CACTCTCAAA AGGTTTTGAT ATTATTGCCC AAGCTCAATC
TGGTACTGGT AAAACTGCTA CCTTCACCGT TGGTATCTTA TCTAGAATTG
ATATTTCAGT CCTCAAATGT CAAGCTCTCA TCATTGCCCC AACTCGTGAA
CTTGCTCAAC AAATTCAAAA GGTTGTTTTA GCTTTAGGTG AATATTTACA
CATTAAATCA TACGCATGTA TTGGTGGTAC TAAGATTACT GATGATATTC
AAGCCCTCCA AAGTGGTGTA CACGTAGTTG TCGGTACCCC AGGTCGTGTC
TTTGAAATGT TATCACGTGG TATCATTAAT CGTGACACCA TTAGAATTTT
CTGTCTTGAT GAAGCTGATG AAATGTTATC ACGTGGTTTC AAGGATCAAA
TCTATGAAAT TTTCAGATTC TTACCAAAGA C--------- -TTCTCTGCC
ACCATGACTG ATGAAACTTT AGGTATCACA AGCAAATTCA TGCAAAACCC
AGTCAGTATC CTCGTCAAAA AGGATGAATT AACCCTTGAA GGTATTAGAC
AATTCTACGT CAACGTTGGT GTTGAACAAG GTAAATTTGA AGTTTTAACC
GATCTCTACG AAACCCTCTC TATCACTCAA TCCGTTATTT TCTGTAACAC
CCGTAGAAAG GTCGATTGGT TAACAAGCAA AATGACCGAA CAAAAATTCA
CCGTCTCATC AACTCACGGT GACCAAAAGG ATCGTGATGG TATCTTACAA
GCTTTCCGTT CTGGTGCTAC TCGTGTCCTC ATCACCACCG ATCTCTTAGC
TCGTGGTATT GATGTCCAAC AAGTATCACT CGTTATCAAC TTTGATTTAC
CAACCAACAT TGAAAATTAC ATTCATCGTA TCGGTCGTTC AGGTCGTTTC
GGTCGTAAGG GTGTTGCCAT CAACTTTATC ACTGACGCTG AAAGAGGTCA
AATCGATGAA TTATCTCGTC ATTACAATAC CTACATTGCC GAAATGCCAC
AAGACATTGG AAGTTTCCTC TAAACGAGTT CCAAAAATGG TTTATAGTTC
AGTTGGTCCC CATTTGGTGA GGGCCATAGG GTTTATAAAT CGACCGCCCC
CCTCCCTATC CAATACTCAC ACCACAACAA CATATTTCAT CCGCTCATTA
TAAAAACAAC AAAAACTTCA ACNCTTTTAC ACCTCGTT

Translated Amino Acid Sequence CFF657

yy*nlnhkrkk*NMSASNKDDQLMKNEFESTYDKIVDSFDNMELPKDLLRGIYSYGFEKP
SAIQQRAIIPLSKGFDIIAQAQSGTGKTATFTVGILSRIDISVLKCQALIIAPTRELAQQ
IQKVVLALGEYLHIKSYACIGGTKITDDIQALQSGVHVVVGTPGRVFEMLSRGIINRDTI
RIFCLDEADEMLSRGFKDQIYEIFRFLPK---

---FSATMTDETLGITSKFMQNPVSILVKKDELTLEGIRQFYVNVGVEQGKFEVLTDLYE
TLSITQSVIFCNTRRKVDWLTSKMTEQKFTVSSTHGDQKDRDGILQAFRSGATRVLITTD
LLARGIDVQQVSLVINFDLPTNIENYIHRIGRSGRFGRKGVAINFITDAERGQIDELSRH
YNTYIAEMPQDIGSFL*tsskngl*fswspfgeghrvykstaplpiqyshhnnifhplii
kttktstllhlv

Homology CFF657 vs CSM-cDNA

Sequences producing significant alignments:                      (bits) Value


CFF657 (CFF657Q) /CSM/CF/CFF6-C/CFF657Q.Seq.d/                       2686   0.0
SFE202 (SFE202Q) /CSM/SF/SFE2-A/SFE202Q.Seq.d/                       1473   0.0
CFF622 (CFF622Q) /CSM/CF/CFF6-A/CFF622Q.Seq.d/                       1473   0.0
VFI417 (VFI417Q) /CSM/VF/VFI4-A/VFI417Q.Seq.d/                       1471   0.0
SFG770 (SFG770Q) /CSM/SF/SFG7-C/SFG770Q.Seq.d/                       1469   0.0
CFH334 (CFH334Q) /CSM/CF/CFH3-B/CFH334Q.Seq.d/                       1469   0.0
CFE621 (CFE621Q) /CSM/CF/CFE6-A/CFE621Q.Seq.d/                       1469   0.0
SFG686 (SFG686Q) /CSM/SF/SFG6-D/SFG686Q.Seq.d/                       1467   0.0
VFD768 (VFD768Q) /CSM/VF/VFD7-C/VFD768Q.Seq.d/                       1465   0.0
SFC409 (SFC409Q) /CSM/SF/SFC4-A/SFC409Q.Seq.d/                       1465   0.0

Homology CFF657 vs DNA

Sequences producing significant alignments:                  (bits) Value  N


U78759|U78759.1 Dictyostelium discoideum IfdA (ifdA) mRNA, p...  1455   0.0    2
X80796|X80796.1 S.pombe eIF-4A mRNA for translation initiati...   115   3e-81  7
L40627|L40627.1 Schizosaccharomyces pombe cell cycle control...   115   3e-81  7
AL132828|AL132828.1 S.pombe chromosome I cosmid c1006.            115   3e-74  8
AX537016|AX537016.1 Sequence 617 from Patent WO02064766.           58   1e-45  6
AX536980|AX536980.1 Sequence 581 from Patent WO02064766.           58   1e-45  6
D84472|D84472.1 Candida albicans DNA for translation initiat...    60   3e-45  6
AU011976|AU011976.1 Schizosaccharomyces pombe cDNA, clone sp...    66   6e-40  5
AY098962|AY098962.1 Arabidopsis thaliana AT3g13920/MDC16_4 m...    94   4e-39  7
AY091304|AY091304.1 Arabidopsis thaliana putative eukaryotic...    94   4e-39  7

Homology CFF657 vs Protein

Sequences producing significant alignments:                      (bits) Value


U78759_1(U78759|pid:none) Dictyostelium discoideum IfdA (ifdA) m...   757   0.0
CP001142_274(CP001142|pid:none) Phaeodactylum tricornutum CCAP 1...   511   e-143
JO843767_1(JO843767|pid:none) TSA: Amblyomma maculatum Am-12062 ...   508   e-142
(Q9CAI7) RecName: Full=Eukaryotic initiation factor 4A-3;       ...   504   e-141
FQ857297_19(FQ857297|pid:none) Piriformospora indica PIRI_contig...   500   e-140
(P47943) RecName: Full=ATP-dependent RNA helicase eIF4A;        ...   498   e-139
GQ865547_1(GQ865547|pid:none) Prunus persica cultivar Loring DEA...   498   e-139
DQ667140_1(DQ667140|pid:none) Callinectes sapidus eukaryotic ini...   497   e-139
HB811396_1(HB811396|pid:none) Sequence 160610 from Patent EP2090...   497   e-139
FR824213_34(FR824213|pid:none) Albugo laibachii Nc14, genomic co...   497   e-139

Homology CFF657 vs Genome