Dictyostelium discoideum cDNA Clone CFF495

Sequence CFF495

AAAGAAAAAT TTAAATTAGT TATTTATAAT TACAAAAAGT ATAAAAGAAT
AATTTTAAAT TAAAATTAAA TAATTAAAAT TAAATATAAA TATATTCATG
AAGGCCATAG TTTTAATTAT TTTTATTTTA TTAATCAATA ATCAAATTGT
AAAAACTTGG GATCAAAATG ATGTTAAACA ATTTTTTAAC AATTATCCAT
TTGGTATTAA ATCTAGTAGT GGATTTTATT ATGATACTCA AGTTTCAACA
CTGAATGGAA CAATTTATGG ATTTACAAAG AATGGATTTG TTGATTTTCC
AGAGAATCCA GGATTTGAAG AGTCAGGATT TTATTTAGAC CAATCAGTTG
ATATGGTTGA AGATAGATTG GGAGCAGATG GTAGACCAGT TTATAAAAAT
GGTAATGAAC CATTCATTGT TACAAATAAG GAAACTGGTA AACAATTTAC
ATTGGCACAT AATTCATCAA CATTTTATGA TTGGTTTCAT TCAAGTCCAT
GTGTGAATTA TCCATTAAAT GGTAGTATAT GGATTACAAA GAATGCTTTA
CAAGGTGTTG CATTTA---- ------ATTA TCAATTGATG GTAGTGTCTC
AAGCGGTAGT GGTTCCAATG ACGATCCAAC TTGTATTTTA NAACCAATTG
ACTGTGATGA TAATGATGAA TGTACCGTTG ATGAATGTTC AATAACAAGT
GGATGTAAAC ATACGGTTTG TCCAAATTTA NATAAATCTG GTAAAACTGA
AATTAAATGT GTAAATGGAA AATGCCAAAC ACGTGTTAAA TCNCCTTGTG
AATTGATGAC TTGTCCAAAT GATACTATTT GCATTGAAAA TTATAATAAC
NCTAAAAACT TGACAATTTG TTTACCAATT GAATGTTCCA TAAATAATTG
TGATGATGGT AATGGGTGNA CTATCGATTC TTGTAATTTC CAAACAGGAT
TTTGTGATCA TTTACTTTGC CCAAACAAAT ATTTGGATCC AATTACAAAT
CATACAACAA TTCCAATCTG TGAAAATAAT AAATGTGTAA ACAAAACTCT
CNCAAATTGT GAATATTTTA AATGCGATCA TCCAAATGAA ATTTGCATAG
AANAGAAAAT AACNCNTGCN CCAAAATGTG TTCATTTCGA NAGTGGTTGT
TTATCNTGNT CTGATTTAAA TTGCCAATCA TTAACTTCNC CAAATTCAAG
ATGTAAATAT ATTGAAATGG ATAATCAAAA ATTACGTTGT AAAGGNTCGG
TTGGTTCCTG NTGNCCNTAT TTACCAACCT GTTATTAAAA AAAAAAATAA
AAGTTAAAAA AA

Translated Amino Acid Sequence CFF495

kknln*lfiitksike*f*ikik*LKLNINIFMKAIVLIIFILLINNQIVKTWDQNDVKQ
FFNNYPFGIKSSSGFYYDTQVSTLNGTIYGFTKNGFVDFPENPGFEESGFYLDQSVDMVE
DRLGADGRPVYKNGNEPFIVTNKETGKQFTLAHNSSTFYDWFHSSPCVNYPLNGSIWITK
NALQGVAF---

---LSIDGSVSSGSGSNDDPTCILXPIDCDDNDECTVDECSITSGCKHTVCPNLXKSGKT
EIKCVNGKCQTRVKSPCELMTCPNDTICIENYNNXKNLTICLPIECSINNCDDGNGXTID
SCNFQTGFCDHLLCPNKYLDPITNHTTIPICENNKCVNKTLXNCEYFKCDHPNEICIEXK
ITXAPKCVHFXSGCLSXSDLNCQSLTSPNSRCKYIEMDNQKLRCKGSVGSXXPYLPTCY*
kkk*klkk

Homology CFF495 vs CSM-cDNA

Sequences producing significant alignments:                      (bits) Value


CFF495 (CFF495Q) /CSM/CF/CFF4-D/CFF495Q.Seq.d/                       2192   0.0
CHB266 (CHB266Q) /CSM/CH/CHB2-C/CHB266Q.Seq.d/                       1120   0.0
CFC284 (CFC284Q) /CSM/CF/CFC2-D/CFC284Q.Seq.d/                       1068   0.0
CFH329 (CFH329Q) /CSM/CF/CFH3-B/CFH329Q.Seq.d/                       1051   0.0
CHB529 (CHB529Q) /CSM/CH/CHB5-B/CHB529Q.Seq.d/                        979   0.0
CFD807 (CFD807Q) /CSM/CF/CFD8-A/CFD807Q.Seq.d/                        932   0.0
AFD372 (AFD372Q) /CSM/AF/AFD3-C/AFD372Q.Seq.d/                        932   0.0
AFJ225 (AFJ225Q) /CSM/AF/AFJ2-B/AFJ225Q.Seq.d/                        930   0.0
CHB588 (CHB588Q) /CSM/CH/CHB5-D/CHB588Q.Seq.d/                        926   0.0
CFA195 (CFA195Q) /CSM/CF/CFA1-D/CFA195Q.Seq.d/                        926   0.0

Homology CFF495 vs DNA

Sequences producing significant alignments:                  (bits) Value  N


AF318287|AF318287.1 Dictyostelium discoideum putative calmod...  1292   0.0    1
AC116305|AC116305.2 Dictyostelium discoideum chromosome 2 ma...    32   2e-05  21
AC116956|AC116956.2 Dictyostelium discoideum chromosome 2 ma...    32   5e-05  19
AC115592|AC115592.2 Dictyostelium discoideum chromosome 2 ma...    34   7e-05  12
AC117075|AC117075.2 Dictyostelium discoideum chromosome 2 ma...    32   8e-05  15
AC115577|AC115577.2 Dictyostelium discoideum chromosome 2 ma...    36   1e-04  14
AL844505|AL844505.1 Plasmodium falciparum chromosome  6.           34   1e-04  17
AC115684|AC115684.2 Dictyostelium discoideum chromosome 2 ma...    36   2e-04  13
Z98551|Z98551.1 Plasmodium falciparum MAL3P6.                      40   3e-04  11
AL929352|AL929352.1 Plasmodium falciparum strain 3D7, chromo...    36   6e-04  18

Homology CFF495 vs Protein

Sequences producing significant alignments:                      (bits) Value


A26838(A26838)prestalk protein precursor - slime mold (Dictyoste...    80   3e-13
(P11976) RecName: Full=Prestalk protein; AltName: Full=Extracell...    79   6e-13
(Q54C32) RecName: Full=Protein psiQ; Flags: Precursor;                 74   1e-11
A27020(A27020)DIF-induced prestalk pDd63 protein precursor - sli...    72   9e-11
AC116984_103(AC116984|pid:none) Dictyostelium discoideum chromos...    70   2e-10
S44208(S44208) extracellular matrix protein B - Dictyostelium mi...    70   4e-10
(Q54YG2) RecName: Full=Extracellular matrix protein A; AltName: ...    70   4e-10
(Q54CH8) RecName: Full=Protein psiN; Flags: Precursor;                 69   5e-10
(Q54C31) RecName: Full=Protein psiR; Flags: Precursor;                 68   1e-09
AC117072_61(AC117072|pid:none) Dictyostelium discoideum chromoso...    62   1e-07

Homology CFF495 vs Genome