<List of Series> <Series: CFF4-A> <Clone: CFF416> <SEQ> <Translated> <CSM> <DNA> <Protein> <Genome> <PSORT> <MOTIF>
Dictyostelium discoideum cDNA Clone CFF416
Dictyostelium discoideum cDNA Project Home
Sequence CFF416
ATTGCAATTG TTTCCCAAAA TTACACACAC CACAAAAATA AAAGAGATAA
GAAAAACAGA AAAAAATAAA AAATAAAAAA AACTCTATAT AAAATTCTTA
TCTATATATA AATAAAACAA AAGTAAAAAA AAGAATGTTT CCCATTTCAG
TAGGGTGGAT AGCATTTGCA GGTGTTCTTC TCACGTTAAT TGCATTAAAT
TATTTTATAG TTAAATATTA CTCAGATAAA CATGAAAGTG GAAAAATTAC
AACAATCATT TCAGTAATTG GACTTACATT AACACTTTTA TGTGTTATGC
TTATTCCAGT TGATATTTTA AATGTTTCAA CAATGTCACA TAGTGATGGT
ACACAAATTT CACCATATTC AATCTCTCAA AGAACTGAAG GTGTTAAAAT
GTTATATTAT ATATTATATG GATCAATTTT AGGAGTTTCA CTAATTTTAG
TACCATTTGC ATATTTTTAT CATGAAGAAT ATGATGAAAA TATTCCAACA
TGTTCA---- ------AAAG AGCATTATCA AAACGTTCAG AAAGATTGGA
TAATTCAAAC AAAGGATTTA GAAAGATTTT AGTCATCTTT AGACCATTTG
CATTCATTTT TGGTTTCATC TTTATCTTGG TCTCTTTATT GATCATTATC
TCCATCGTCT TATCGTTGGT CGATAAAATC TCAAGTAGTG TCTGTGGTTC
GGCTTGCGGT TTCCTTTCAA CTTATCCACA ATTGAAAAAT CCATTCGATA
TCATTCTCAC CAAATTGGCC CCATATTTCC CATTGGATTA TATCATTATT
GGTGGTTTAA TATTTTTCAT TTATTCTTGT ACTTTATCTG GTATCACTAG
AATTGGTATT AGATTTTTAT GGATTAATAT GTTTGAATTT GGATATCGTA
AAACTTTCCC ACAAGGTTTA TTACTTGCAT CAGTGTTATT AATGTTAAGT
AATTTATGTT TAAATATGCA AATTGTAAAT TTAGCACCAA GATATGTTAT
GTATGGTGCT CAAGTCTATT TGAATGGTAC TTCAGTTATA CCATGTACAA
TTAATGCACC AACAGATCTT TGTATTATGT CAGAAATTGG TCTTTTAACT
TCACGTATTC AATTAGGTAT TTCTTTCTTT GGTATTGTAT TTTATTATGG
TACTTGGGTA ATTGTTGCAA CTTTTATTTT AGGTTTAGCT GTTTCAATAT
TTAAAAGAAG ACCATCTGCG CTTTAAGTTA TTC
Translated Amino Acid Sequence CFF416
<All Frames>
cncfpklhtpqk*kr*ekqkkiknkknsi*NSYLYINKTKVKKRMFPISVGWIAFAGVLL
TLIALNYFIVKYYSDKHESGKITTIISVIGLTLTLLCVMLIPVDILNVSTMSHSDGTQIS
PYSISQRTEGVKMLYYILYGSILGVSLILVPFAYFYHEEYDENIPTCS---
---RALSKRSERLDNSNKGFRKILVIFRPFAFIFGFIFILVSLLIIISIVLSLVDKISSS
VCGSACGFLSTYPQLKNPFDIILTKLAPYFPLDYIIIGGLIFFIYSCTLSGITRIGIRFL
WINMFEFGYRKTFPQGLLLASVLLMLSNLCLNMQIVNLAPRYVMYGAQVYLNGTSVIPCT
INAPTDLCIMSEIGLLTSRIQLGISFFGIVFYYGTWVIVATFILGLAVSIFKRRPSAL*v
i
Homology CFF416 vs CSM-cDNA
<more CSM info>
Sequences producing significant alignments: (bits) Value
CFF416 (CFF416Q) /CSM/CF/CFF4-A/CFF416Q.Seq.d/ 2123 0.0
CFC519 (CFC519Q) /CSM/CF/CFC5-A/CFC519Q.Seq.d/ 1417 0.0
AFJ767 (AFJ767Q) /CSM/AF/AFJ7-C/AFJ767Q.Seq.d/ 1411 0.0
CFH203 (CFH203Q) /CSM/CF/CFH2-A/CFH203Q.Seq.d/ 1407 0.0
SFK816 (SFK816Q) /CSM/SF/SFK8-A/SFK816Q.Seq.d/ 1388 0.0
CFF842 (CFF842Q) /CSM/CF/CFF8-B/CFF842Q.Seq.d/ 1372 0.0
CHB356 (CHB356Q) /CSM/CH/CHB3-C/CHB356Q.Seq.d/ 1370 0.0
CHS245 (CHS245Q) /CSM/CH/CHS2-B/CHS245Q.Seq.d/ 1368 0.0
CFC228 (CFC228Q) /CSM/CF/CFC2-B/CFC228Q.Seq.d/ 1368 0.0
CFH611 (CFH611Q) /CSM/CF/CFH6-A/CFH611Q.Seq.d/ 1346 0.0
Homology CFF416 vs DNA
<more DNA info>
Sequences producing significant alignments: (bits) Value N
AL844506|AL844506.1 Plasmodium falciparum chromosome 7. 36 1e-07 26
AF063866|AF063866.1 Melanoplus sanguinipes entomopoxvirus, c... 34 2e-07 16
AX344565|AX344565.1 Sequence 16 from Patent WO0200932. 36 2e-06 15
AE014822|AE014822.1 Plasmodium falciparum 3D7 chromosome 14 ... 30 2e-06 21
AE014832|AE014832.1 Plasmodium falciparum 3D7 chromosome 10 ... 36 2e-05 17
AE014826|AE014826.1 Plasmodium falciparum 3D7 chromosome 14 ... 34 3e-05 17
AE014817|AE014817.1 Plasmodium falciparum 3D7 chromosome 14 ... 34 4e-05 17
AE014850|AE014850.1 Plasmodium falciparum 3D7 chromosome 12,... 36 1e-04 17
AE014825|AE014825.1 Plasmodium falciparum 3D7 chromosome 14 ... 34 2e-04 16
AL513330|AL513330.9 Human DNA sequence *** SEQUENCING CANCEL... 34 5e-04 13
Homology CFF416 vs Protein
<more Protein info>
Sequences producing significant alignments: (bits) Value
(Q54KD1) RecName: Full=Probable lysosomal cobalamin transporter;... 314 6e-84
(A7RM45) RecName: Full=Probable lysosomal cobalamin transporter; 94 1e-17
(Q5ZI05) RecName: Full=Probable lysosomal cobalamin transporter;... 87 2e-15
BC044020_1(BC044020|pid:none) Xenopus laevis Probable lysosomal ... 86 4e-15
(Q7SYR6) RecName: Full=Probable lysosomal cobalamin transporter;... 86 4e-15
(Q5PR61) RecName: Full=Probable lysosomal cobalamin transporter;... 85 1e-14
(Q0VGV9) RecName: Full=Probable lysosomal cobalamin transporter;... 84 1e-14
(Q4R5E3) RecName: Full=Probable lysosomal cobalamin transporter;... 84 2e-14
(Q8K0B2) RecName: Full=Probable lysosomal cobalamin transporter;... 84 2e-14
(Q3SYY9) RecName: Full=Probable lysosomal cobalamin transporter;... 82 8e-14
Homology CFF416 vs Genome
<more Genome info>
<List of Series> <Series: CFF4-A> <Clone: CFF416> <SEQ> <Translated> <CSM> <DNA> <Protein> <Genome> <PSORT> <MOTIF>
Dictyostelium discoideum cDNA Project Home