Dictyostelium discoideum cDNA Clone CFD643

Sequence CFD643

TACAAAATTA TAACATTGGT AGTAAAATGT TCCGTATAAT TGTGAAGTTA
ACTCAAGAAG AGATAATGGA GTTATCGGAA TTAAGAATGC TGATATGAGT
AATGTTAATA AGGTTAAGAC CTTATCACTG AAAATTAGAA GTTTCCTAAT
AAAAAGGTAA GCTGATTAGG GTTACGCGAT CGCTAAGATT AATATGACAA
TAAACTATCG ATGCGCATAT AGATTAATAA TTCTAACGTT TTTATTGTAG
TTTTAATTGA CATGTGTATT TTAAATAATT ATATTATACT TACATTATAG
ATTATTTGAA ATATAAGTTT TAAAAATAGA TTAAAACAAA ATATCTGTAA
AAAGATATTT TAAATAAAAA ATCGTACTTA AACCGACACT GGTTAATTGA
TAGAATATAT TAAAGTGTAG AATGAATGAT TCTGAAGGAA CTCGGCAAAA
TAACTCCGTA ACTGCGGGAG AAGGAGAGCC TTTGTTGTAA AAAATGAAGG
TCACAGTAAA GAAGGGGTGG CGACTGTTTA ATAAAAACAC AGGATTCTGC
AAAATGGCAA CATGATGTAT AGGGTCTGCG ACCTGCCCGG TGCTCC----
------AGGG TTGGGGTGTT CACCCATTAA AGTGTTACAT GAGCTGGGTT
TAAAACGTCG TGAGACAGTT TGGTCCCTAT CTACTGTTAA AAACGAAAAA
ATTAAAATCC TTCCTTTAGT ACGAGAGGAC TGAGGTGGGT CGATCACTGG
TGTATTAATT ATTATAACAA TAGTACCGTT AAGTAGCTAC ATCGAAATAT
TAATAATATA TAGTATTATT AAGAGAGAAC TGCTGAAAAA ATATTAAGTA
GGAAACTTAT TTTAGATTTT TTTATAGTCA GGTAAAAGAT TATTACTTTG
ATAGGCTACA TATAGAAATG AATAGTAATA TAATATAAAA ATTTGAAAAA
ATTTTTACCA TTAATTCCTA TAATTAA

Translated Amino Acid Sequence CFD643

ykiitlvvkcsv*l*s*lkkr*wsyrn*ec*ye*c**g*dliten*kfpnkkvs*lglrd
r*d*ydnklsmri*innsnvfivvlidmcilnnyiiltl*ii*nisfknrlkqnickkif
*iknrt*tdtg*lieyikv*ne*f*rnsak*lrncgrrrafvvkneghskegvatv**KH
RILQNGNMMYRVCDLPGA---

---GLGCSPIKVLHELGLKRRETVWSLSTVKNEKIKILPLVRED*ggsitgvliiitivp
lssyieiliiysiikrellkky*vgnlf*ifl*sgkrlll**atyrne**yniki*knfy
h*fl*l

Homology CFD643 vs CSM-cDNA

Sequences producing significant alignments:                      (bits) Value


MIT-GENOME (MIT-GENOMEQ) /CSM/OTHERS/MIT-GENOMEQ.Seq.d/               634   0.0
CFD643 (CFD643Q) /CSM/CF/CFD6-B/CFD643Q.Seq.d/                        634   0.0
CHD527 (CHD527Q) /CSM/CH/CHD5-B/CHD527Q.Seq.d/                        626   e-178
VSD302 (VSD302Q) /CSM/VS/VSD3-A/VSD302Q.Seq.d/                        622   e-177
AFF514 (AFF514Q) /CSM/AF/AFF5-A/AFF514Q.Seq.d/                        486   e-136
VHO432 (VHO432Q) /CSM/VH/VHO4-B/VHO432Q.Seq.d/                        462   e-129
VFE275 (VFE275Q) /CSM/VF/VFE2-D/VFE275Q.Seq.d/                        462   e-129
SHH465 (SHH465Q) /CSM/SH/SHH4-C/SHH465Q.Seq.d/                        462   e-129
SHG307 (SHG307Q) /CSM/SH/SHG3-A/SHG307Q.Seq.d/                        462   e-129
SFB625 (SFB625Q) /CSM/SF/SFB6-B/SFB625Q.Seq.d/                        462   e-129

Homology CFD643 vs DNA

Sequences producing significant alignments:                  (bits) Value  N


U21880|U21880.1 Dictyostelium discoideum mitochondrion large...   634   0.0    2
D16466|D16466.1 Dictyostelium discoideum mitochondrial DNA.       634   0.0    5
AB000109|AB000109.1 Dictyostelium discoideum mitochondrial D...   634   0.0    7
AF295546|AF295546.1 Malawimonas jakobiformis mitochondrial D...    92   7e-97  13
AF166114|AF166114.1 Mesostigma viride chloroplast DNA, compl...    78   4e-49  14
M81884|M81884.1 Epifagus virginiana chloroplast, complete ge...    86   4e-49  12
AP004638|AP004638.1 Psilotum nudum chloroplast DNA, complete...    78   7e-49  12
X04465|X04465.1 Marchantia polymorpha chloroplast genome DNA.      78   2e-48  14
AP005672|AP005672.1 Physcomitrella patens subsp. patens chlo...    78   3e-47  12
AP000423|AP000423.1 Arabidopsis thaliana chloroplast genomic...    78   3e-46  12

Homology CFD643 vs Protein

Sequences producing significant alignments:                      (bits) Value


GU474919_1(GU474919|pid:none) Uncultured Spirochaetales bacteriu...    54   1e-05
CP001230_1127(CP001230|pid:none) Persephonella marina EX-H1, com...    51   1e-04
AE017197_194(AE017197|pid:none) Rickettsia typhi str. Wilmington...    44   4e-04
AM085146_13(AM085146|pid:none) Magnetospirillum gryphiswaldense ...    46   7e-04
AP010904_342(AP010904|pid:none) Desulfovibrio magneticus RS-1 DN...    48   0.001
FM179322_1886(FM179322|pid:none) Lactobacillus rhamnosus GG whol...    47   0.002
FN692037_443(FN692037|pid:none) Lactobacillus crispatus ST1 comp...    45   0.005
CP003000_286(CP003000|pid:none) Blattabacterium sp. (Mastotermes...    45   0.008
CP002629_2745(CP002629|pid:none) Desulfobacca acetoxidans DSM 11...    45   0.008
AC146792_21(AC146792|pid:none) Medicago truncatula clone mth2-32...    44   0.010

Homology CFD643 vs Genome