Dictyostelium discoideum cDNA Clone CFD588

Sequence CFD588

ATATTATACT TCATATAAAT AACTATCTCC AAATGAAATT TTTATTAAAA
ATTAATTTAT TGATCTTTTT TTTTGTGAAT TCCTGTAACT CACATCACTA
TGTTGGTATT ATCGATGACA ATTCTATAAC TCCAAACATG CAATGGTTTA
ACGATATTAT GTTCATTAGA AGAAACGCCA ATGGTGCCTG GCCTAGAGTT
AATTCTTTTA ATTGAAACGG GGTATACTTT GTTTTCGGGA ATATGGCTCC
TCATGGATTG ACCTTGCTGT ATATAGGTAA AGCATCCCAT CAAGATGGGA
TGGGTTTGTA CCACAGAGGT TACTCAGATA TAGTTGGTCG CCCAAGGTTT
TGGGGGACTC CAAATGCAAG ACCACTAGAA ATGGCAAATG CCCAAATTTT
AATGTATTAT AGAGGTTTTG ATGGTCCAGT TGCTGGTCAT GCTGAGTGGT
TCCTTTCAGT ATTTGGGTGC CCAGAAAATA GTTTCAACGA GGGTGGTTTA
AAGGAATCTC AATTTTGTTA TGGTGCAGGT CAATGGAATT TTTTCCATGC
AACTGCTCCC GCAG------ ----

Translated Amino Acid Sequence CFD588

iilhinnylqmkfllkinllifffvnscnshhyvgiiddnsitpnmqwfndimfirrnan
gawprvnsfn*NGVYFVFGNMAPHGLTLLYIGKASHQDGMGLYHRGYSDIVGRPRFWGTP
NARPLEMANAQILMYYRGFDGPVAGHAEWFLSVFGCPENSFNEGGLKESQFCYGAGQWNF
FHATAPA---

Homology CFD588 vs CSM-cDNA

Sequences producing significant alignments:                      (bits) Value


CFD588 (CFD588Q) /CSM/CF/CFD5-D/CFD588Q.Seq.d/                       1065   0.0
CFJ231 (CFJ231Q) /CSM/CF/CFJ2-B/CFJ231Q.Seq.d/                       1049   0.0
SFF131 (SFF131Q) /CSM/SF/SFF1-B/SFF131Q.Seq.d/                        973   0.0
AFN861 (AFN861Q) /CSM/AF/AFN8-C/AFN861Q.Seq.d/                        955   0.0
CHD730 (CHD730Q) /CSM/CH/CHD7-B/CHD730Q.Seq.d/                        656   0.0
SFJ512 (SFJ512Q) /CSM/SF/SFJ5-A/SFJ512Q.Seq.d/                        541   e-153
SHA540 (SHA540Q) /CSM/SH/SHA5-B/SHA540Q.Seq.d/                        531   e-150
CHL386 (CHL386Q) /CSM/CH/CHL3-D/CHL386Q.Seq.d/                        424   e-118
SFG383 (SFG383Q) /CSM/SF/SFG3-D/SFG383Q.Seq.d/                        293   1e-78
CHB224 (CHB224Q) /CSM/CH/CHB2-A/CHB224Q.Seq.d/                        287   9e-77

Homology CFD588 vs DNA

Sequences producing significant alignments:                  (bits) Value  N


AC116551|AC116551.2 Dictyostelium discoideum chromosome 2 ma...   283   e-100  3
AF147052|AF147052.1 Ochetellus sp. ACBM cytochrome c oxidase...    40   0.005  2
AX196296|AX196296.1 Sequence 3 from Patent WO0151627.              50   0.034  1
AX196295|AX196295.1 Sequence 2 from Patent WO0151627.              50   0.034  1
AE014831|AE014831.1 Plasmodium falciparum 3D7 chromosome 10 ...    34   0.041  7
AC126686|AC126686.3 Mus musculus BAC clone RP23-148C24 from ...    42   0.088  7
AB063522|AB063522.2 Wigglesworthia glossinidia endosymbiont ...    38   0.11   9
AX347045|AX347045.1 Sequence 2116 from Patent WO0200928.           48   0.14   1
AF426275|AF426275.1 Cicadetta celis large subunit ribosomal ...    44   0.17   2
AX345795|AX345795.1 Sequence 866 from Patent WO0200928.            36   0.23   4

Homology CFD588 vs Protein

Sequences producing significant alignments:                      (bits) Value


AF139914_1(AF139914|pid:none) Xenopus laevis basic-helix-loop-he...    35   2.3
(Q90Z12) RecName: Full=Transcription factor HES-4-A; AltName: Fu...    35   2.3
AF022798_1(AF022798|pid:none) Xenopus laevis basic-helix-loop-he...    35   2.3
AM180355_2966(AM180355|pid:none) Clostridium difficile 630 compl...    34   3.8
AM480090_2(AM480090|pid:none) Vitis vinifera contig VV78X100082....    34   3.8
CP000108_29(CP000108|pid:none) Chlorobium chlorochromatii CaD3, ...    33   6.5
AF383159_1(AF383159|pid:none) Xenopus laevis hairy2a mRNA, compl...    33   6.6

Homology CFD588 vs Genome