Homology CFC634 vs Protein

Query= CFC634 (CFC634Q) /CSM/CF/CFC6-B/CFC634Q.Seq.d/
         (1152 letters)

Database: nrp_B
           5,349,213 sequences; 1,732,582,204 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

FM864216_551(FM864216|pid:none) Mycoplasma conjunctivae HRC/581T...    36   4.7

>FM864216_551(FM864216|pid:none) Mycoplasma conjunctivae HRC/581T
           complete genome.
          Length = 980

 Score = 35.8 bits (81), Expect = 4.7
 Identities = 16/52 (30%), Positives = 34/52 (65%)
 Frame = +2

Query: 65  DENIEILFHDERIQTLVGFQIINIKSDLKSLRKEIDDMEIPELKGLEFRFML 220
           ++N +++  +  I+  +  +I NIKS++  ++KE+D++ I E K  +FR M+
Sbjct: 263 EKNQQVIVENTNIKQDLEKKISNIKSEIYEIKKELDNINIEEAKAQKFREMV 314

Lambda     K      H
   0.318    0.134    0.401

Gapped
Lambda     K      H
   0.267   0.0410    0.140

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 5349213
Number of Hits to DB: 1,590,229,501
Number of extensions: 23833004
Number of successful extensions: 70027
Number of sequences better than 10.0: 1
Number of HSP's gapped: 68913
Number of HSP's successfully gapped: 1
Length of query: 384
Length of database: 1,732,582,204
Length adjustment: 134
Effective length of query: 250
Effective length of database: 1,015,787,662
Effective search space: 253946915500
Effective search space used: 253946915500
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 32 (16.9 bits)




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