Dictyostelium discoideum cDNA Clone CFA439

Sequence CFA439

GTTAAATTTA TTTNCAAAAA GTATAATACA AGATGGGTAA AGAAAAAACA
CATATTAATA TCGTCGTTAT TGGTCACGTA GATGCTGGTA AATCAACCAC
CACTGGTCAT TTAATCTACA AATGTGGTGG TATCGATAAA AGAGTTATCG
AAAAATACGA AAAGGAAGCT TCTGAAATGG GTAAACAATC ATTCAAATAT
GCTTGGGTTA TGGATAAATT AAAAGCTGAA CGTGAAAGAG GTATTACCAT
CGATATTGCT TTATGGAAAT TCGAAACCTC AAAATACTAC TTCACCATTA
TTGATGCTCC AGGTCACAGA GATTTCATCA AGAATATGAT TACTGGTACC
TCACAAGCCG ATTGTGCTGT CTTAGTCATT GCCTCCCCAA CTGGTGAGTT
CGAAGCTGGT ATTGCCAAGA ACGGTCAAAC TCGTGAACAC GCTCTCCTTG
CTTACACTTT AGGTGTCAAA CAAATGATCG TTGCTATCAA CAAGATGGAT
GAAAAATCAA CCTACTCACA AGCCCGTTAC GACGAAATTG TCAAAGAAGT
TTCATCTTTC ATTAAAAAGA ---------- CCCTCGATGC CATCGTCGAA
CCAAAACGTC CACACGATAA ACCATTACGT ATTCCATTAC AAGATGTCTA
CAAGATCGGT GGTATCGGTA CTGTTCCAGT AGGTCGTGTC GAAACTGGTA
TCATTAAACC AGGTATGGTC GTCACCTTTG CCCCAGCTGG TCTCTCAACT
GAAGTTAAAT CAGTCGAAAT GCATCACGAA CAACTCCCAG AAGCCCGTCC
AGGTGACAAT GTAGGTTTCA ACGTTAAAAA CGTTTCAGTC AAAGAAATTA
AAAGAGGTAT GGTCGCTGGT GACTCCAAAA ACGATCCACC ACAAGAAACT
GAAAAATTCG TTGCTCAAGT TATCGTCCTC AACCATCCAG GTCAAATCCA
TGCTGGTTAC TCACCAGTCT TAGATTGTCA CACTGCTCAC ATTGCCTGTA
AATTCACTGA AATCGTCGAT AAAGTTGATC GTCGTACTGG TGCCGTCGTT
GCCAAAGAAG GTACTGCCGC CGTCGTCTTA AAGAATGGTG ATGCTGCTAT
GGTCGAATTA ACCCCATCTC GTCCAATGTG TGTTGAATCA TTCACTGAAT
ACCCACCATT AGGTCGTTTC GCCGTCAGAG ATATGAGACA AACCGTTGCC
GTCGGTGTCA TCAAATCAAC CGTCAAGAAA GCCCCAGGTA AAGCAGGTAT
AAGAAAGGTG CTGCTGCTCC ATCAAAGAAG AAATAANATT TAAAAAAAAT
TT

Translated Amino Acid Sequence CFA439

*iyxqkv*YKMGKEKTHINIVVIGHVDAGKSTTTGHLIYKCGGIDKRVIEKYEKEASEMG
KQSFKYAWVMDKLKAERERGITIDIALWKFETSKYYFTIIDAPGHRDFIKNMITGTSQAD
CAVLVIASPTGEFEAGIAKNGQTREHALLAYTLGVKQMIVAINKMDEKSTYSQARYDEIV
KEVSSFIKK---

---LDAIVEPKRPHDKPLRIPLQDVYKIGGIGTVPVGRVETGIIKPGMVVTFAPAGLSTE
VKSVEMHHEQLPEARPGDNVGFNVKNVSVKEIKRGMVAGDSKNDPPQETEKFVAQVIVLN
HPGQIHAGYSPVLDCHTAHIACKFTEIVDKVDRRTGAVVAKEGTAAVVLKNGDAAMVELT
PSRPMCVESFTEYPPLGRFAVRDMRQTVAVGVIKSTVKKAPGKAGIRKVLLLHQRRNXI*
kkf

Homology CFA439 vs CSM-cDNA

Sequences producing significant alignments:                      (bits) Value


CFA439 (CFA439Q) /CSM/CF/CFA4-B/CFA439Q.Seq.d/                       2488   0.0
CFB539 (CFB539Q) /CSM/CF/CFB5-B/CFB539Q.Seq.d/                       1403   0.0
CFB884 (CFB884Q) /CSM/CF/CFB8-D/CFB884Q.Seq.d/                       1402   0.0
VFD847 (VFD847Q) /CSM/VF/VFD8-B/VFD847Q.Seq.d/                       1396   0.0
VFG722 (VFG722Q) /CSM/VF/VFG7-A/VFG722Q.Seq.d/                       1392   0.0
VFO682 (VFO682Q) /CSM/VF/VFO6-D/VFO682Q.Seq.d/                       1390   0.0
CFB795 (CFB795Q) /CSM/CF/CFB7-D/CFB795Q.Seq.d/                       1390   0.0
CFC844 (CFC844Q) /CSM/CF/CFC8-B/CFC844Q.Seq.d/                       1386   0.0
CHE287 (CHE287Q) /CSM/CH/CHE2-D/CHE287Q.Seq.d/                       1384   0.0
VFD312 (VFD312Q) /CSM/VF/VFD3-A/VFD312Q.Seq.d/                       1382   0.0

Homology CFA439 vs DNA

Sequences producing significant alignments:                    (bits)  Value  N


X55972|X55972.1 D. discoideum EF1-II gene for elongation fa...  1316  0.0  4
X55973|X55973.1 D. discoideum EF1-I gene for elongation fac...  1285  0.0  4
AF016242|AF016242.1 Dictyostelium discoideum protein synthe...  1172  0.0  4
M29934|M29934.1 C.albicans elongation factor 1-alpha (TEF-1...   260  0.0  9
M29935|M29935.1 C.albicans elongation factor 1-alpha (TEF-2...   236  0.0  9
AF402092|AF402092.1 Pichia anomala strain NRRL Y-366 transl...   224  e-161  8
AX109715|AX109715.1 Sequence 448 from Patent WO0123604.          192  e-157  9
AX109714|AX109714.1 Sequence 447 from Patent WO0123604.          188  e-156  9
AF402023|AF402023.1 Kluyveromyces piceae strain NRRL Y-1797...   204  e-146  6
AX109679|AX109679.1 Sequence 412 from Patent WO0123604.          155  e-146  7

Homology CFA439 vs Protein

Sequences producing significant alignments:                      (bits) Value


(P18624) RecName: Full=Elongation factor 1-alpha;          Short...   448   0.0
X55973_1(X55973|pid:none) D. discoideum EF1-I gene for elongatio...   448   0.0
X55972_1(X55972|pid:none) D. discoideum EF1-II gene for elongati...   448   0.0
EU360789_1(EU360789|pid:none) Acytostelium leptosomum elongation...   392   0.0
EU360785_1(EU360785|pid:none) Dictyostelium medusoides elongatio...   379   0.0
EU360787_1(EU360787|pid:none) Dictyostelium rhizopodium elongati...   370   0.0
EF513183_1(EF513183|pid:none) Arcyria stipata elongation factor ...   356   0.0
GQ377695_1(GQ377695|pid:none) Arachnula sp. CL12 elongation fact...   347   0.0
EF513195_1(EF513195|pid:none) Lepidoderma tigrinum elongation fa...   339   e-176
DQ138080_1(DQ138080|pid:none) Phytophthora parasitica isolate 14...   335   e-176

Homology CFA439 vs Genome