Homology CFA163 vs DNA
Query= CFA163 (CFA163Q) /CSM/CF/CFA1-C/CFA163Q.Seq.d/
(1123 letters)
Database: ddbjhum1.seq; ddbjhum10.seq; ddbjhum11.seq; ddbjhum12.seq;
ddbjhum13.seq; ddbjhum14.seq; ddbjhum15.seq; ddbjhum16.seq;
ddbjhum17.seq; ddbjhum18.seq; ddbjhum19.seq; ddbjhum2.seq;
ddbjhum20.seq; ddbjhum21.seq; ddbjhum3.seq; ddbjhum4.seq;
ddbjhum5.seq; ddbjhum6.seq; ddbjhum7.seq; ddbjhum8.seq; ddbjhum9.seq;
/db/DDBJNEW.DATA/a/new_ddbjhum.seq; ddbjpri.seq;
/db/DDBJNEW.DATA/a/new_ddbjpri.seq; ddbjrod1.seq; ddbjrod2.seq;
ddbjrod3.seq; ddbjrod4.seq; ddbjrod5.seq; ddbjrod6.seq; ddbjrod7.seq;
ddbjrod8.seq; ddbjrod9.seq; /db/DDBJNEW.DATA/a/new_ddbjrod.seq;
ddbjmam.seq; /db/DDBJNEW.DATA/a/new_ddbjmam.seq; ddbjvrt1.seq;
ddbjvrt2.seq; ddbjvrt3.seq; /db/DDBJNEW.DATA/a/new_ddbjvrt.seq;
ddbjinv1.seq; ddbjinv2.seq; ddbjinv3.seq; ddbjinv4.seq; ddbjinv5.seq;
/db/DDBJNEW.DATA/a/new_ddbjinv.seq; ddbjpln1.seq; ddbjpln2.seq;
ddbjpln3.seq; ddbjpln4.seq; ddbjpln5.seq; ddbjpln6.seq; ddbjpln7.seq;
ddbjpln8.seq; /db/DDBJNEW.DATA/a/new_ddbjpln.seq; ddbjbct1.seq;
ddbjbct2.seq; ddbjbct3.seq; ddbjbct4.seq; ddbjbct5.seq; ddbjbct6.seq;
ddbjbct7.seq; /db/DDBJNEW.DATA/a/new_ddbjbct.seq; ddbjvrl1.seq;
ddbjvrl2.seq; ddbjvrl3.seq; /db/DDBJNEW.DATA/a/new_ddbjvrl.seq;
ddbjphg.seq; /db/DDBJNEW.DATA/a/new_ddbjphg.seq; ddbjuna.seq;
/db/DDBJNEW.DATA/a/new_ddbjuna.seq; ddbjgss1.seq; ddbjgss10.seq;
ddbjgss11.seq; ddbjgss12.seq; ddbjgss13.seq; ddbjgss14.seq;
ddbjgss15.seq; ddbjgss16.seq; ddbjgss17.seq; ddbjgss18.seq;
ddbjgss19.seq; ddbjgss2.seq; ddbjgss20.seq; ddbjgss21.seq;
ddbjgss22.seq; ddbjgss23.seq; ddbjgss24.seq; ddbjgss25.seq;
ddbjgss26.seq; ddbjgss27.seq; ddbjgss28.seq; ddbjgss29.seq;
ddbjgss3.seq; ddbjgss30.seq; ddbjgss31.seq; ddbjgss32.seq;
ddbjgss33.seq; ddbjgss34.seq; ddbjgss35.seq; ddbjgss36.seq;
ddbjgss37.seq; ddbjgss38.seq; ddbjgss39.seq; ddbjgss4.seq;
ddbjgss40.seq; ddbjgss41.seq; ddbjgss42.seq; ddbjgss43.seq;
ddbjgss44.seq; ddbjgss45.seq; ddbjgss46.seq; ddbjgss47.seq;
ddbjgss48.seq; ddbjgss49.seq; ddbjgss5.seq; ddbjgss50.seq;
ddbjgss51.seq; ddbjgss52.seq; ddbjgss53.seq; ddbjgss54.seq;
ddbjgss55.seq; ddbjgss56.seq; ddbjgss57.seq; ddbjgss58.seq;
ddbjgss59.seq; ddbjgss6.seq; ddbjgss60.seq; ddbjgss61.seq;
ddbjgss62.seq; ddbjgss63.seq; ddbjgss64.seq; ddbjgss65.seq;
ddbjgss66.seq; ddbjgss67.seq; ddbjgss68.seq; ddbjgss69.seq;
ddbjgss7.seq; ddbjgss70.seq; ddbjgss71.seq; ddbjgss72.seq;
ddbjgss73.seq; ddbjgss74.seq; ddbjgss75.seq; ddbjgss8.seq;
ddbjgss9.seq; /db/DDBJNEW.DATA/a/new_ddbjgss1.seq;
/db/DDBJNEW.DATA/a/new_ddbjgss2.seq; ddbjhtg1.seq; ddbjhtg10.seq;
ddbjhtg11.seq; ddbjhtg12.seq; ddbjhtg13.seq; ddbjhtg14.seq;
ddbjhtg15.seq; ddbjhtg16.seq; ddbjhtg17.seq; ddbjhtg18.seq;
ddbjhtg19.seq; ddbjhtg2.seq; ddbjhtg20.seq; ddbjhtg21.seq;
ddbjhtg22.seq; ddbjhtg23.seq; ddbjhtg24.seq; ddbjhtg25.seq;
ddbjhtg26.seq; ddbjhtg27.seq; ddbjhtg28.seq; ddbjhtg29.seq;
ddbjhtg3.seq; ddbjhtg30.seq; ddbjhtg31.seq; ddbjhtg32.seq;
ddbjhtg33.seq; ddbjhtg34.seq; ddbjhtg35.seq; ddbjhtg36.seq;
ddbjhtg37.seq; ddbjhtg38.seq; ddbjhtg39.seq; ddbjhtg4.seq;
ddbjhtg40.seq; ddbjhtg41.seq; ddbjhtg42.seq; ddbjhtg43.seq;
ddbjhtg44.seq; ddbjhtg45.seq; ddbjhtg46.seq; ddbjhtg47.seq;
ddbjhtg48.seq; ddbjhtg49.seq; ddbjhtg5.seq; ddbjhtg50.seq;
ddbjhtg51.seq; ddbjhtg6.seq; ddbjhtg7.seq; ddbjhtg8.seq; ddbjhtg9.seq;
/db/DDBJNEW.DATA/a/new_ddbjhtg1.seq; ddbjpat1.seq; ddbjpat2.seq;
ddbjpat3.seq; ddbjpat4.seq; ddbjpat5.seq; ddbjpat6.seq; ddbjpat7.seq;
ddbjpat8.seq; ddbjpat9.seq; /db/DDBJNEW.DATA/a/new_ddbjpat.seq;
ddbjsts1.seq; ddbjsts2.seq; ddbjsts3.seq;
/db/DDBJNEW.DATA/a/new_ddbjsts.seq; ddbjsyn.seq;
/db/DDBJNEW.DATA/a/new_ddbjsyn.seq; est_atha1.seq;
/db/DDBJNEW.DATA/a/new_est_atha1.seq; est_btra1.seq;
/db/DDBJNEW.DATA/a/new_est_btra1.seq; est_cele1.seq;
/db/DDBJNEW.DATA/a/new_est_cele1.seq; est_crei1.seq;
/db/DDBJNEW.DATA/a/new_est_crei1.seq; est_cint1.seq;
/db/DDBJNEW.DATA/a/new_est_cint1.seq; est_drer1.seq;
/db/DDBJNEW.DATA/a/new_est_drer1.seq; est_dmel1.seq;
/db/DDBJNEW.DATA/a/new_est_dmel1.seq; est_ggal1.seq;
/db/DDBJNEW.DATA/a/new_est_ggal1.seq; est_gmax1.seq;
/db/DDBJNEW.DATA/a/new_est_gmax1.seq; est_hum1.seq; est_hum2.seq;
est_hum3.seq; est_hum4.seq; /db/DDBJNEW.DATA/a/new_est_hum1.seq;
est_hvul1.seq; /db/DDBJNEW.DATA/a/new_est_hvul1.seq; est_lesc1.seq;
/db/DDBJNEW.DATA/a/new_est_lesc1.seq; est_mous1.seq; est_mous2.seq;
est_mous3.seq; /db/DDBJNEW.DATA/a/new_est_mous1.seq; est_mtru1.seq;
/db/DDBJNEW.DATA/a/new_est_mtru1.seq; est_osat1.seq;
/db/DDBJNEW.DATA/a/new_est_osat1.seq; est_rnor1.seq;
/db/DDBJNEW.DATA/a/new_est_rnor1.seq; est_stro1.seq; est_taes1.seq;
/db/DDBJNEW.DATA/a/new_est_taes1.seq; est_xlae1.seq;
/db/DDBJNEW.DATA/a/new_est_xlae1.seq; est_zmay1.seq;
/db/DDBJNEW.DATA/a/new_est_zmay1.seq; est_rest1.seq; est_rest2.seq;
est_rest3.seq; /db/DDBJNEW.DATA/a/new_est_rest1.seq
32,440,979 sequences; U,736,663,519 total letters
Searching....................................................done
Score E
Sequences producing significant alignments: (bits) Value N
U17110|U17110.1 Clostridium acetobutylicum crotonase (crt), ... 48 7e-05 4
AE007768|AE007768.1 Clostridium acetobutylicum ATCC824 secti... 48 0.001 4
AE017281|AE017281.1 Bacillus cereus ATCC 10987, section 18 o... 56 0.001 1
BX866308|BX866308.2 Rainbow trout multi-tissues - normalized... 56 0.001 1
AL331969|AL331969.1 Tetraodon nigroviridis genome survey seq... 50 0.070 1
AP004603|AP004603.1 Oceanobacillus iheyensis HTE831 genomic ... 50 0.070 1
BX005351|BX005351.7 Zebrafish DNA sequence from clone CH211-... 34 0.10 7
AE015944|AE015944.1 Clostridium tetani E88, section 9 of 10 ... 36 0.15 2
CA347210|CA347210.1 678289 NCCCWA 1RT Oncorhynchus mykiss cD... 48 0.28 1
CB075142|CB075142.1 hx15g08.b1 Gingko megasporophyll (NYBG) ... 44 0.68 2
CK025118|CK025118.1 AGENCOURT_16619117 NIH_ZGC_10 Danio reri... 38 0.93 2
CF998182|CF998182.1 AGENCOURT_16393543 NIH_ZGC_7 Danio rerio... 38 0.99 2
CK688093|CK688093.1 ZF101-P00045-DEPE-F2_I03 GISZF101 Danio ... 38 1.0 2
AC146049|AC146049.2 Pan troglodytes chromosome 7 clone RP43-... 46 1.1 1
AL049536|AL049536.5 Human DNA sequence from clone RP1-205F14... 46 1.1 1
AC024293|AC024293.18 Homo sapiens chromosome 11, clone RP11-... 46 1.1 1
AC146137|AC146137.1 Pan troglodytes chromosome UNK clone RP4... 46 1.1 1
BE886020|BE886020.1 601507149F1 NIH_MGC_71 Homo sapiens cDNA... 46 1.1 1
BX324218|BX324218.7 Zebrafish DNA sequence from clone CH211-... 34 1.1 6
BX950856|BX950856.2 Zebrafish DNA sequence *** SEQUENCING IN... 34 1.6 7
BX088722|BX088722.8 Zebrafish DNA sequence from clone CH211-... 36 1.8 7
BC044203|BC044203.1 Danio rerio similar to acyl-Coenzyme A d... 38 2.0 2
BC066503|BC066503.1 Danio rerio cDNA clone IMAGE:6525812, pa... 38 2.2 2
AC055748|AC055748.21 Homo sapiens 3 BAC RP11-402J7 (Roswell ... 38 3.1 6
AL627232|AL627232.6 Human DNA sequence from clone RP11-363P1... 38 4.1 4
AC113158|AC113158.2 Mus musculus chromosome UNK clone RP23-1... 44 4.3 1
AL034551|AL034551.17 Human DNA sequence from clone RP4-606P2... 44 4.3 1
AC083994|AC083994.2 Homo sapiens clone RP11-222H22, WORKING ... 44 4.3 1
BX323563|BX323563.7 Zebrafish DNA sequence *** SEQUENCING IN... 44 4.3 1
BX323870|BX323870.8 Zebrafish DNA sequence *** SEQUENCING IN... 44 4.3 1
AC034304|AC034304.2 Homo sapiens chromosome 8 clone RP11-194... 44 4.3 1
AP004843|AP004843.1 Oryza sativa (japonica cultivar-group) g... 34 5.8 10
AC129934|AC129934.3 Mus musculus clone RP23-246E2, WORKING D... 36 5.9 7
AC106268|AC106268.4 Rattus norvegicus clone CH230-220K9, ***... 32 5.9 10
AC133118|AC133118.3 Rattus norvegicus clone CH230-57O16, ***... 40 6.3 8
BX927130|BX927130.3 Zebrafish DNA sequence *** SEQUENCING IN... 36 9.8 6
AC068892|AC068892.7 Homo sapiens chromosome 10 clone RP11-11... 42 17 1
BP190175|BP190175.1 Dugesia japonica cDNA, clone: 04459_HH, ... 42 17 1
AZ353484|AZ353484.1 1M0092F22F Mouse 10kb plasmid UUGC1M lib... 42 17 1
CD421682|CD421682.1 ku87c07.y1 Strongyloides ratti PA female... 42 17 1
AC103315|AC103315.7 Rattus norvegicus clone CH230-218N3, ***... 42 17 1
AP004596|AP004596.1 Oceanobacillus iheyensis HTE831 genomic ... 42 17 1
AP004593|AP004593.1 Oceanobacillus iheyensis HTE831 genomic ... 42 17 1
AB026669|AB026669.1 Acinetobacter sp. NCIMB9871 cyclohexanol... 42 17 1
AL731767|AL731767.18 Mouse DNA sequence from clone RP23-338L... 42 17 1
AL121980|AL121980.14 Human DNA sequence from clone RP5-1007G... 42 17 1
AL935126|AL935126.18 Zebrafish DNA sequence from clone CH211... 42 17 1
AB083556|AB083556.1 Bacillus cereus acdA gene for acyl-CoA d... 42 17 1
AC007660|AC007660.2 Arabidopsis thaliana chromosome II secti... 42 17 1
AC004775|AC004775.1 Homo sapiens chromosome 5, P1 clone 1308... 42 17 1
AC116687|AC116687.4 Mus musculus clone RP23-473M24, WORKING ... 42 17 1
AE017015|AE017015.1 Bacillus cereus ATCC 14579 section 18 of... 42 17 1
AE017041|AE017041.1 Bacillus anthracis str. Ames section 18 ... 42 17 1
AL928793|AL928793.13 Mouse DNA sequence from clone RP23-89M1... 42 17 1
AC026794|AC026794.5 Homo sapiens chromosome 5 clone CTD-2276... 42 17 1
AX508470|AX508470.1 Sequence 3165 from Patent WO0216655. 42 17 1
BH491361|BH491361.1 BOHLM22TR BOHL Brassica oleracea genomic... 42 17 1
AL607026|AL607026.11 Human DNA sequence from clone RP11-498G... 42 17 1
AR268419|AR268419.1 Sequence 5 from patent US 6498242. 42 17 1
AR268430|AR268430.1 Sequence 27 from patent US 6498242. 42 17 1
AF282240|AF282240.1 Acinetobacter sp. SE19 ChnZ (chnZ), pil... 42 17 1
BH747719|BH747719.1 SALK_033281.50.40.x Arabidopsis thaliana... 42 17 1
AL160033|AL160033.21 Human DNA sequence from clone RP11-480K... 42 17 1
D13973|D13973.1 Dictyostelium discoideum DNA for Dp87 protei... 42 17 1
AQ067951|AQ067951.1 HS_2184_A1_A06_MR CIT Approved Human Gen... 42 17 1
>U17110|U17110.1 Clostridium acetobutylicum crotonase (crt), putative
butyryl-CoA dehydrogenase (BCD), putative a-subunit of
electron-transfer flavoprotein (etfA), putative b-subunit
of electron-transfer flavoprotein (etfB), and
3-hydroxybutyryl-CoA dehydrogenase (hbd) genes, complete
cds.
Length = 4993
Score = 48.1 bits (24), Expect(4) = 7e-05
Identities = 42/48 (87%)
Strand = Plus / Plus
Query: 1045 caattatttggtggttatggttatcttaaagattatccagttgaaaga 1092
|||||||||||||| || || ||| |||||||||||||||||||||
Sbjct: 1982 caattatttggtggatacggatatacaaaagattatccagttgaaaga 2029
Score = 30.2 bits (15), Expect(4) = 7e-05
Identities = 15/15 (100%)
Strand = Plus / Plus
Query: 54 aacagaggatcaaaa 68
|||||||||||||||
Sbjct: 891 aacagaggatcaaaa 905
Score = 30.2 bits (15), Expect(4) = 7e-05
Identities = 15/15 (100%)
Strand = Plus / Plus
Query: 340 ggtacagaagaacaa 354
|||||||||||||||
Sbjct: 1280 ggtacagaagaacaa 1294
Score = 26.3 bits (13), Expect(4) = 7e-05
Identities = 13/13 (100%)
Strand = Plus / Plus
Query: 889 atggcagatatgg 901
|||||||||||||
Sbjct: 1829 atggcagatatgg 1841
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Number of Hits to DB: 25,699,005
Number of Sequences: 32440979
Number of extensions: 25699005
Number of successful extensions: 1979524
Number of sequences better than 10.0: 132
length of query: 1123
length of database: U,736,663,519
effective HSP length: 22
effective length of query: 1101
effective length of database: U,022,961,981
effective search space: 40762281141081
effective search space used: 40762281141081
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 21 (42.1 bits)
[blastall] WARNING: [000.000] Reached max 400 HSPs in BlastSaveCurrentHsp, continuing with this limit
ANTI-DNA BLAST search was processed by blast@nig.ac.jp, National Institute of Genetics, Japan.
Dictyostelium discoideum cDNA Project Home