Homology AHQ634 vs Protein
Query= AHQ634 (AHQ634Q) /CSM/AH/AHQ6-B/AHQ634Q.Seq.d/
(597 letters)
Database: nrp_B
5,349,213 sequences; 1,732,582,204 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
CP001707_1225(CP001707|pid:none) Kangiella koreensis DSM 16069, ... 35 2.4
CP001055_10(CP001055|pid:none) Elusimicrobium minutum Pei191, co... 34 5.4
FR845719_2313(FR845719|pid:none) Streptomyces venezuelae ATCC 10... 34 5.4
CP000356_376(CP000356|pid:none) Sphingopyxis alaskensis RB2256, ... 33 7.1
BA000030_5598(BA000030|pid:none) Streptomyces avermitilis MA-468... 33 7.1
CP000685_1388(CP000685|pid:none) Flavobacterium johnsoniae UW101... 33 9.3
AP009493_5007(AP009493|pid:none) Streptomyces griseus subsp. gri... 33 9.3
>CP001707_1225(CP001707|pid:none) Kangiella koreensis DSM 16069,
complete genome.
Length = 330
Score = 35.0 bits (79), Expect = 2.4
Identities = 31/106 (29%), Positives = 47/106 (44%), Gaps = 4/106 (3%)
Frame = +2
Query: 239 TSQKILPDYSITFTCE--IPSANSPVCTSMDMDFTKLAGKLTLRGANLKTPNIVIAYDIK 412
+S K+L S+T+ C IP+A + + D + G T+ G NL T + YD K
Sbjct: 175 SSHKVLDPSSMTWDCAHPIPTARNSAAGAYINDLWHVIGGRTVEGGNLATHEV---YDYK 231
Query: 413 ANQIPLPLPTEVKWEPPTMAGTAALMTGD--FLLFGEDVTTLPGVY 544
A++ P P G AA + G+ ++ GE GVY
Sbjct: 232 ADKWHSRAPL-----PQAQGGLAAAVLGEHIYVFGGEYFDNGGGVY 272
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 5349213
Number of Hits to DB: 1,365,308,665
Number of extensions: 26724995
Number of successful extensions: 60022
Number of sequences better than 10.0: 7
Number of HSP's gapped: 59966
Number of HSP's successfully gapped: 7
Length of query: 199
Length of database: 1,732,582,204
Length adjustment: 125
Effective length of query: 74
Effective length of database: 1,063,930,579
Effective search space: 78730862846
Effective search space used: 78730862846
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 30 (16.2 bits)
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