Homology AFO514 vs Protein
Query= AFO514 (AFO514Q) /CSM/AF/AFO5-A/AFO514Q.Seq.d/
(1446 letters)
Database: nrp_B
5,349,213 sequences; 1,732,582,204 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC150800_1(AC150800|pid:none) Medicago truncatula chromosome 7 c... 162 6e-38
AP004010_10(AP004010|pid:none) Oryza sativa Japonica Group genom... 151 8e-35
BT036493_1(BT036493|pid:none) Zea mays full-length cDNA clone ZM... 149 3e-34
BT054842_1(BT054842|pid:none) Zea mays full-length cDNA clone ZM... 149 3e-34
AK066109_1(AK066109|pid:none) Oryza sativa Japonica Group cDNA c... 148 7e-34
CP000584_134(CP000584|pid:none) Ostreococcus lucimarinus CCE9901... 143 2e-32
CR954202_367(CR954202|pid:none) Ostreococcus tauri strain OTTH05... 138 7e-31
CP001575_252(CP001575|pid:none) Micromonas sp. RCC299 chromosome... 138 9e-31
AB463201_1(AB463201|pid:none) Synthetic construct DNA, clone: pF... 136 3e-30
(Q8WWY3) RecName: Full=U4/U6 small nuclear ribonucleoprotein Prp... 135 6e-30
AY040822_1(AY040822|pid:none) Homo sapiens U4/U6 snRNP-associate... 135 6e-30
AK033283_1(AK033283|pid:none) Mus musculus 15 days embryo male t... 135 6e-30
AK033190_1(AK033190|pid:none) Mus musculus 15 days embryo male t... 135 6e-30
(Q6NVP6) RecName: Full=U4/U6 small nuclear ribonucleoprotein Prp... 132 5e-29
AE014296_2813(AE014296|pid:none) Drosophila melanogaster chromos... 131 9e-29
(Q7SXM7) RecName: Full=U4/U6 small nuclear ribonucleoprotein Prp... 130 2e-28
BC061461_1(BC061461|pid:none) Mus musculus PRP31 pre-mRNA proces... 126 3e-27
AC006708_15(AC006708|pid:none) Caenorhabditis elegans cosmid Y11... 125 6e-27
(Q5U5C5) RecName: Full=U4/U6 small nuclear ribonucleoprotein Prp... 125 8e-27
AK301709_1(AK301709|pid:none) Homo sapiens cDNA FLJ59251 complet... 124 1e-26
AB593024_1(AB593024|pid:none) Homo sapiens PRPF31 mRNA for U4/U6... 124 1e-26
FR823387_333(FR823387|pid:none) Neospora caninum Liverpool compl... 121 9e-26
FN357551_9(FN357551|pid:none) Schistosoma mansoni genome sequenc... 120 3e-25
CP000286_30(CP000286|pid:none) Cryptococcus gattii WM276 chromos... 111 1e-22
AK005294_1(AK005294|pid:none) Mus musculus adult male cerebellum... 108 1e-21
AF308303_1(AF308303|pid:none) Homo sapiens serologically defined... 106 3e-21
AL035475_27(AL035475|pid:none) Plasmodium falciparum MAL4P2. 105 9e-21
CR382128_529(CR382128|pid:none) Yarrowia lipolytica strain CLIB1... 97 2e-18
HE605203_450(HE605203|pid:none) Candida parapsilosis strain CDC3... 96 5e-18
AP008208_2433(AP008208|pid:none) Oryza sativa (japonica cultivar... 95 9e-18
CR382135_334(CR382135|pid:none) Debaryomyces hansenii strain CBS... 95 1e-17
CP002500_410(CP002500|pid:none) Eremothecium cymbalariae DBVPG#7... 89 6e-16
FM992689_597(FM992689|pid:none) Candida dubliniensis CD36 chromo... 89 8e-16
HE612859_374(HE612859|pid:none) Tetrapisispora phaffii CBS 4417 ... 88 1e-15
CR382124_618(CR382124|pid:none) Kluyveromyces lactis strain NRRL... 87 2e-15
CP000499_437(CP000499|pid:none) Scheffersomyces stipitis CBS 605... 86 7e-15
(P49704) RecName: Full=Pre-mRNA-processing factor 31; &FN393070... 85 1e-14
CU928170_505(CU928170|pid:none) Kluyveromyces thermotolerans str... 85 1e-14
CU928175_514(CU928175|pid:none) Zygosaccharomyces rouxii strain ... 83 3e-14
AP007169_339(AP007169|pid:none) Aspergillus oryzae RIB40 DNA, SC... 83 5e-14
CR380953_123(CR380953|pid:none) Candida glabrata strain CBS138 c... 79 7e-13
FN357539_11(FN357539|pid:none) Schistosoma mansoni genome sequen... 74 3e-11
AM920431_493(AM920431|pid:none) Penicillium chrysogenum Wisconsi... 72 6e-11
AX972415_1(AX972415|pid:none) Sequence 3218 from Patent EP1104808. 71 1e-10
AK044457_1(AK044457|pid:none) Mus musculus adult retina cDNA, RI... 71 1e-10
CP001800_1820(CP001800|pid:none) Sulfolobus solfataricus 98/2, c... 69 5e-10
AE006641_852(AE006641|pid:none) Sulfolobus solfataricus P2, comp... 69 5e-10
CP001400_1150(CP001400|pid:none) Sulfolobus islandicus M.14.25, ... 69 9e-10
CP001399_1228(CP001399|pid:none) Sulfolobus islandicus L.S.2.15,... 69 9e-10
CP002425_1122(CP002425|pid:none) Sulfolobus islandicus REY15A, c... 69 9e-10
CP000505_375(CP000505|pid:none) Thermofilum pendens Hrk 5, compl... 67 2e-09
AF201092_1(AF201092|pid:none) Sulfolobus acidocaldarius NOP56 ho... 67 3e-09
AE009439_559(AE009439|pid:none) Methanopyrus kandleri AV19, comp... 67 3e-09
AY735554_1(AY735554|pid:none) Arabidopsis thaliana chromosome 1 ... 65 8e-09
AC003671_6(AC003671|pid:none) Arabidopsis thaliana chromosome 1 ... 65 8e-09
CP002684_7839(CP002684|pid:none) Arabidopsis thaliana chromosome... 65 8e-09
AY735555_1(AY735555|pid:none) Arabidopsis thaliana chromosome 1 ... 65 8e-09
AF043704_1(AF043704|pid:none) Caenorhabditis elegans cosmid W01B... 65 1e-08
CP002098_23(CP002098|pid:none) Ignisphaera aggregans DSM 17230, ... 65 1e-08
B72528(B72528)probable nucleolar protein NOP5 APE2199 - Aeropyru... 64 3e-08
CP002535_1375(CP002535|pid:none) Acidianus hospitalis W1, comple... 64 3e-08
AJ010592_34(AJ010592|pid:none) Guillardia theta DNA for complete... 63 4e-08
CP002656_502(CP002656|pid:none) Metallosphaera cuprina Ar-4, com... 63 5e-08
CP000575_1234(CP000575|pid:none) Staphylothermus marinus F1, com... 62 6e-08
CP000816_70(CP000816|pid:none) Ignicoccus hospitalis KIN4/I, com... 62 6e-08
CP002737_1180(CP002737|pid:none) Methanotorris igneus Kol 5, com... 62 8e-08
CP002838_1810(CP002838|pid:none) Pyrolobus fumarii 1A, complete ... 62 8e-08
GM016257_360(GM016257|pid:none) Sequence 1087 from Patent EP1923... 62 8e-08
CP001398_465(CP001398|pid:none) Thermococcus gammatolerans EJ3, ... 62 8e-08
AP006878_185(AP006878|pid:none) Thermococcus kodakarensis KOD1 D... 62 8e-08
AP011832_10(AP011832|pid:none) Candidatus Caldiarchaeum subterra... 62 1e-07
CP001463_788(CP001463|pid:none) Thermococcus sibiricus MM 739, c... 61 1e-07
CP000855_1305(CP000855|pid:none) Thermococcus onnurineus NA1, co... 61 2e-07
AL590444_81(AL590444|pid:none) chromosome IV of strain GB-M1 of ... 60 3e-07
CP001696_107(CP001696|pid:none) Methanocaldococcus fervens AG86,... 60 3e-07
CP000852_1257(CP000852|pid:none) Caldivirga maquilingensis IC-16... 59 7e-07
HE575323_882(HE575323|pid:none) Trypanosoma congolense IL3000 an... 58 1e-06
CP001142_240(CP001142|pid:none) Phaeodactylum tricornutum CCAP 1... 58 2e-06
AM502228_52(AM502228|pid:none) Leishmania infantum chromosome 10... 58 2e-06
FR799563_21(FR799563|pid:none) Leishmania mexicana MHOM/GT/2001/... 58 2e-06
AE008384_1593(AE008384|pid:none) Methanosarcina mazei strain Goe... 57 2e-06
FQ311444_90(FQ311444|pid:none) Sporisorium reilianum SRZ2 chromo... 57 3e-06
CP000609_999(CP000609|pid:none) Methanococcus maripaludis C5, co... 57 3e-06
AK376846_1(AK376846|pid:none) Hordeum vulgare subsp. vulgare mRN... 57 3e-06
CP000742_1447(CP000742|pid:none) Methanococcus vannielii SB, com... 57 4e-06
CR936257_1027(CR936257|pid:none) Natronomonas pharaonis DSM 2160... 57 4e-06
CP001787_345(CP001787|pid:none) Methanocaldococcus vulcanius M7,... 57 4e-06
HE575321_342(HE575321|pid:none) Trypanosoma congolense IL3000 an... 56 5e-06
AK369454_1(AK369454|pid:none) Hordeum vulgare subsp. vulgare mRN... 56 5e-06
CP002913_686(CP002913|pid:none) Methanococcus maripaludis X1, co... 56 6e-06
AE000782_2062(AE000782|pid:none) Archaeoglobus fulgidus DSM 4304... 56 6e-06
FN554971_352(FN554971|pid:none) Trypanosoma brucei gambiense DAL... 56 6e-06
AC092212_41(AC092212|pid:none) Trypanosoma brucei chromosome 8 c... 56 6e-06
BX950229_596(BX950229|pid:none) Methanococcus maripaludis strain... 56 6e-06
CP000866_1387(CP000866|pid:none) Nitrosopumilus maritimus SCM1, ... 56 6e-06
CP000745_1603(CP000745|pid:none) Methanococcus maripaludis C7, c... 55 8e-06
AE014297_3480(AE014297|pid:none) Drosophila melanogaster chromos... 55 1e-05
BT001613_1(BT001613|pid:none) Drosophila melanogaster RE33426 fu... 55 1e-05
AY051644_1(AY051644|pid:none) Drosophila melanogaster GM14238 fu... 55 1e-05
CP002590_1858(CP002590|pid:none) Thermoproteus uzoniensis 768-20... 55 1e-05
AE004437_907(AE004437|pid:none) Halobacterium sp. NRC-1, complet... 55 1e-05
CP001932_678(CP001932|pid:none) Natrialba magadii ATCC 43099, co... 54 2e-05
CP001365_1032(CP001365|pid:none) Halorubrum lacusprofundi ATCC 4... 54 2e-05
CP000561_1091(CP000561|pid:none) Pyrobaculum calidifontis JCM 11... 54 2e-05
BT052903_1(BT052903|pid:none) Medicago truncatula clone MTYFL_FM... 54 2e-05
CP000588_43(CP000588|pid:none) Ostreococcus lucimarinus CCE9901 ... 54 2e-05
AC135505_12(AC135505|pid:none) Medicago truncatula clone mth2-24... 54 2e-05
AK292721_1(AK292721|pid:none) Homo sapiens cDNA FLJ76962 complet... 54 3e-05
(Q5RA29) RecName: Full=Nucleolar protein 56; AltName: Full=Nucle... 54 3e-05
CP002588_1252(CP002588|pid:none) Archaeoglobus veneficus SNP6, c... 54 3e-05
BC086568_1(BC086568|pid:none) Rattus norvegicus nucleolar protei... 54 3e-05
AK077795_1(AK077795|pid:none) Mus musculus adult male thymus cDN... 54 3e-05
CP001690_1501(CP001690|pid:none) Halogeometricum borinquense DSM... 54 3e-05
(Q3SZ63) RecName: Full=Nucleolar protein 56; AltName: Full=Nucle... 54 3e-05
(Q9D6Z1) RecName: Full=Nucleolar protein 56; AltName: Full=Nucle... 54 3e-05
AK139924_1(AK139924|pid:none) Mus musculus 2 cells egg cDNA, RIK... 54 3e-05
HE573026_1054(HE573026|pid:none) Trypanosoma vivax Y486 annotate... 53 4e-05
FR746099_1705(FR746099|pid:none) Haloquadratum walsbyi C23, comp... 53 5e-05
AE017199_335(AE017199|pid:none) Nanoarchaeum equitans Kin4-M, co... 53 5e-05
AY950661_1(AY950661|pid:none) Physarum polycephalum Nop56p mRNA,... 53 5e-05
X60437_1(X60437|pid:none) Drosophila subobscura Dnop56 gene and ... 53 5e-05
AY754572_1(AY754572|pid:none) Drosophila miranda strain MSH22 No... 53 5e-05
AM180088_1636(AM180088|pid:none) Haloquadratum walsbyi DSM 16790... 53 5e-05
CP001945_72(CP001945|pid:none) Encephalitozoon intestinalis ATCC... 52 7e-05
FR799620_14(FR799620|pid:none) Leishmania donovani BPK282A1 comp... 52 7e-05
AB024033_24(AB024033|pid:none) Arabidopsis thaliana genomic DNA,... 52 7e-05
AJ719454_1(AJ719454|pid:none) Gallus gallus mRNA for hypothetica... 52 7e-05
AK226630_1(AK226630|pid:none) Arabidopsis thaliana mRNA for puta... 52 7e-05
CP003117_82(CP003117|pid:none) Methanosaeta harundinacea 6Ac, co... 52 7e-05
CP001688_2199(CP001688|pid:none) Halomicrobium mukohataei DSM 12... 52 7e-05
CP002551_305(CP002551|pid:none) Methanobacterium sp. AL-21, comp... 52 9e-05
CP002173_113(CP002173|pid:none) Cryptomonas paramecium strain CC... 52 9e-05
CP002565_1267(CP002565|pid:none) Methanosaeta concilii GP-6, com... 52 9e-05
AM910990_80(AM910990|pid:none) Plasmodium knowlesi strain H chro... 52 9e-05
CP001574_670(CP001574|pid:none) Micromonas sp. RCC299 chromosome... 52 9e-05
CR761147_1(CR761147|pid:none) Xenopus tropicalis finished cDNA, ... 52 1e-04
AP008209_1480(AP008209|pid:none) Oryza sativa (japonica cultivar... 52 1e-04
AM114193_2828(AM114193|pid:none) Uncultured methanogenic archaeo... 52 1e-04
JI171531_1(JI171531|pid:none) TSA: Ascaris suum ASCP_2109_1593 m... 51 1e-04
CP002278_1136(CP002278|pid:none) Methanothermus fervidus DSM 208... 51 1e-04
AC009894_10(AC009894|pid:none) Arabidopsis thaliana chromosome I... 51 1e-04
CP002529_1309(CP002529|pid:none) Vulcanisaeta moutnovskia 768-28... 51 1e-04
CP000660_1323(CP000660|pid:none) Pyrobaculum arsenaticum DSM 135... 51 1e-04
AE014134_1314(AE014134|pid:none) Drosophila melanogaster chromos... 51 2e-04
AJ311840_1(AJ311840|pid:none) Xenopus laevis mRNA for XNop56 pro... 51 2e-04
CP001014_1686(CP001014|pid:none) Thermoproteus neutrophilus V24S... 51 2e-04
AE017345_334(AE017345|pid:none) Cryptococcus neoformans var. neo... 51 2e-04
BC097676_1(BC097676|pid:none) Xenopus laevis XNop56 protein, mRN... 51 2e-04
AK374558_1(AK374558|pid:none) Hordeum vulgare subsp. vulgare mRN... 51 2e-04
CP001956_1640(CP001956|pid:none) Haloferax volcanii DS2, complet... 51 2e-04
FR823388_84(FR823388|pid:none) Neospora caninum Liverpool comple... 51 2e-04
CP003098_1480(CP003098|pid:none) Pyrobaculum sp. 1860, complete ... 51 2e-04
AJ249465_1(AJ249465|pid:none) Drosophila melanogaster mRNA for D... 51 2e-04
CP001719_1985(CP001719|pid:none) Methanobrevibacter ruminantium ... 51 2e-04
EZ422932_1(EZ422932|pid:none) TSA: Glossina morsitans morsitans ... 50 3e-04
FR824055_47(FR824055|pid:none) Albugo laibachii Nc14, genomic co... 50 3e-04
FP929133_448(FP929133|pid:none) Leptosphaeria maculans JN3 lm_Su... 50 3e-04
AM270362_35(AM270362|pid:none) Aspergillus niger contig An16c010... 50 3e-04
FQ857308_29(FQ857308|pid:none) Piriformospora indica PIRI_contig... 50 3e-04
BC056732_1(BC056732|pid:none) Danio rerio NOP56 ribonucleoprotei... 50 3e-04
BC090915_1(BC090915|pid:none) Danio rerio NOP56 ribonucleoprotei... 50 3e-04
CP000102_1373(CP000102|pid:none) Methanosphaera stadtmanae DSM 3... 50 3e-04
AY648814_1(AY648814|pid:none) Danio rerio NOP56 mRNA, complete c... 50 3e-04
CP000300_1443(CP000300|pid:none) Methanococcoides burtonii DSM 6... 50 3e-04
AP007151_1100(AP007151|pid:none) Aspergillus oryzae RIB40 DNA, S... 50 3e-04
(A6RMY5) RecName: Full=Nucleolar protein 58; &FQ790347_147(FQ79... 50 4e-04
CR762270_1(CR762270|pid:none) Xenopus tropicalis finished cDNA, ... 50 4e-04
(P0CP27) RecName: Full=Nucleolar protein 58; 50 4e-04
BT059278_1(BT059278|pid:none) Salmo salar clone ssal-rgf-538-106... 50 4e-04
AY596297_759(AY596297|pid:none) Haloarcula marismortui ATCC 4304... 50 4e-04
BC077204_1(BC077204|pid:none) Xenopus laevis MGC78950 protein, m... 50 4e-04
BC044082_1(BC044082|pid:none) Xenopus laevis similar to nucleola... 50 4e-04
BC064169_1(BC064169|pid:none) Xenopus tropicalis nucleolar prote... 50 4e-04
CP000291_461(CP000291|pid:none) Cryptococcus gattii WM276 chromo... 50 4e-04
BC106291_1(BC106291|pid:none) Xenopus laevis similar to nucleola... 50 4e-04
BC122512_1(BC122512|pid:none) Xenopus laevis MGC78950 protein, m... 50 4e-04
BT046076_1(BT046076|pid:none) Salmo salar clone ssal-rgf-541-014... 50 4e-04
FN357415_18(FN357415|pid:none) Schistosoma mansoni genome sequen... 49 6e-04
CT005254_144(CT005254|pid:none) Leishmania major strain Friedlin... 49 6e-04
GU942959_17(GU942959|pid:none) Uncultured archaeon MedDCM-OCT-S0... 49 6e-04
CR382130_684(CR382130|pid:none) Yarrowia lipolytica strain CLIB1... 49 6e-04
CP001327_538(CP001327|pid:none) Micromonas sp. RCC299 chromosome... 49 6e-04
BT085852_1(BT085852|pid:none) Zea mays full-length cDNA clone ZM... 49 6e-04
CP000678_1046(CP000678|pid:none) Methanobrevibacter smithii ATCC... 49 6e-04
FN392322_280(FN392322|pid:none) Pichia pastoris GS115 chromosome... 49 7e-04
CR940347_480(CR940347|pid:none) Theileria annulata strain Ankara... 49 0.001
HE575322_174(HE575322|pid:none) Trypanosoma congolense IL3000 an... 49 0.001
AM920427_1595(AM920427|pid:none) Penicillium chrysogenum Wiscons... 49 0.001
FN314948_1(FN314948|pid:none) Schistosoma japonicum isolate Anhu... 48 0.002
FN314949_1(FN314949|pid:none) Schistosoma japonicum isolate Anhu... 48 0.002
CP001857_687(CP001857|pid:none) Archaeoglobus profundus DSM 5631... 48 0.002
AF083031_125(AF083031|pid:none) Guillardia theta nucleomorph chr... 48 0.002
FN357418_41(FN357418|pid:none) Schistosoma mansoni genome sequen... 48 0.002
(Q55FI4) RecName: Full=Nucleolar protein 58; AltName: Full=Nucle... 48 0.002
JN048922_1(JN048922|pid:none) Dictyostelium lacteum clone DL0237... 47 0.002
CP000780_510(CP000780|pid:none) Candidatus Methanoregula boonei ... 47 0.003
FQ310506_548(FQ310506|pid:none) Dicentrarchus labrax chromosome ... 47 0.003
BT128327_1(BT128327|pid:none) Dendroctonus ponderosae clone DPO1... 46 0.005
(A2QE38) RecName: Full=Nucleolar protein 58; &AM270022_76(AM270... 46 0.005
AM910991_158(AM910991|pid:none) Plasmodium knowlesi strain H chr... 46 0.005
CU928180_634(CU928180|pid:none) Kluyveromyces thermotolerans str... 46 0.005
AM433343_4(AM433343|pid:none) Vitis vinifera contig VV78X083692.... 46 0.005
(O94514) RecName: Full=Nucleolar protein 56; AltName: Full=Ribos... 46 0.005
CP002988_1661(CP002988|pid:none) Halophilic archaeon DL31, compl... 46 0.005
AY950659_1(AY950659|pid:none) Euglena gracilis Nop58p mRNA, part... 46 0.005
HM854773_6(HM854773|pid:none) Cucumis melo subsp. melo clone Cm0... 46 0.005
JO842228_1(JO842228|pid:none) TSA: Amblyomma maculatum Am-15774 ... 46 0.006
(Q753I4) RecName: Full=Nucleolar protein 58; 46 0.006
CP002057_852(CP002057|pid:none) Methanococcus voltae A3, complet... 46 0.006
AE016819_564(AE016819|pid:none) Ashbya gossypii ATCC 10895 chrom... 46 0.006
EU515128_1(EU515128|pid:none) Dunaliella salina MAR-binding prot... 46 0.006
AY365418_6(AY365418|pid:none) Epichloe festucae strain 1035.30 c... 46 0.006
(Q9P7S7) RecName: Full=Nucleolar protein 58; &AL138854_6(AL1388... 45 0.008
(Q4WYK9) RecName: Full=Nucleolar protein 58; 45 0.008
(A1D688) RecName: Full=Nucleolar protein 58; 45 0.008
AB059832_1(AB059832|pid:none) Nicotiana tabacum MARBPF mRNA for ... 45 0.008
(A3LUT0) RecName: Full=Nucleolar protein 58; &CP000499_38(CP000... 45 0.011
BC151884_1(BC151884|pid:none) Danio rerio NOP58 ribonucleoprotei... 45 0.011
(Q9MAB3) RecName: Full=Probable nucleolar protein 5-2; AltName: ... 45 0.011
BC155194_1(BC155194|pid:none) Danio rerio NOP58 ribonucleoprotei... 45 0.011
BC061961_1(BC061961|pid:none) Danio rerio NOP58 ribonucleoprotei... 45 0.011
BC044394_1(BC044394|pid:none) Danio rerio NOP58 ribonucleoprotei... 45 0.011
HE605206_80(HE605206|pid:none) Candida parapsilosis strain CDC31... 45 0.011
CP002497_453(CP002497|pid:none) Eremothecium cymbalariae DBVPG#7... 45 0.011
(Q9QZ86) RecName: Full=Nucleolar protein 58; AltName: Full=Nopp1... 45 0.014
AK044216_1(AK044216|pid:none) Mus musculus adult retina cDNA, RI... 45 0.014
(Q6BIX6) RecName: Full=Nucleolar protein 58; &CR382139_303(CR38... 45 0.014
FM992695_866(FM992695|pid:none) Candida dubliniensis CD36 chromo... 45 0.014
(A5E4V9) RecName: Full=Nucleolar protein 58; 45 0.014
(Q1E1Q5) RecName: Full=Nucleolar protein 58; 44 0.018
AK373274_1(AK373274|pid:none) Hordeum vulgare subsp. vulgare mRN... 44 0.018
AF053232_1(AF053232|pid:none) Mus musculus SIK similar protein m... 44 0.018
AK360515_1(AK360515|pid:none) Hordeum vulgare subsp. vulgare mRN... 44 0.018
FR839628_1149(FR839628|pid:none) Pichia pastoris CBS 7435 chromo... 44 0.018
AF069782_1(AF069782|pid:none) Rattus sp. unknown mRNA. 44 0.023
AL117554_1(AL117554|pid:none) Homo sapiens mRNA; cDNA DKFZp564H2... 44 0.023
(Q6CKR8) RecName: Full=Nucleolar protein 58; &CR382126_375(CR38... 44 0.023
BC151725_1(BC151725|pid:none) Bos taurus NOP58 ribonucleoprotein... 44 0.023
BC009306_1(BC009306|pid:none) Homo sapiens NOP58 ribonucleoprote... 44 0.023
T17299(T17299)hypothetical protein DKFZp564H2171.1 - human (frag... 44 0.023
CR859793_1(CR859793|pid:none) Pongo abelii mRNA; cDNA DKFZp468L1... 44 0.023
HE612864_55(HE612864|pid:none) Tetrapisispora phaffii CBS 4417 c... 44 0.023
AF007271_14(AF007271|pid:none) Arabidopsis thaliana BAC TM021B04... 44 0.023
AB015431_1(AB015431|pid:none) Oryza sativa mRNA for SAR DNA bind... 44 0.023
AP008209_1470(AP008209|pid:none) Oryza sativa (japonica cultivar... 44 0.023
CP000881_127(CP000881|pid:none) Hemiselmis andersenii chromosome... 44 0.023
CP002500_655(CP002500|pid:none) Eremothecium cymbalariae DBVPG#7... 44 0.031
AC149637_27(AC149637|pid:none) Medicago truncatula clone mth2-18... 44 0.031
(Q8X066) RecName: Full=Nucleolar protein 58; &AL669992_6(AL6699... 44 0.031
AK133959_1(AK133959|pid:none) Mus musculus 8 days embryo whole b... 44 0.031
AC121244_25(AC121244|pid:none) Medicago truncatula clone mth2-31... 44 0.031
BT053087_1(BT053087|pid:none) Medicago truncatula clone MTYFL_FM... 44 0.031
(Q12460) RecName: Full=Nucleolar protein 56; AltName: Full=Ribos... 43 0.040
CP002688_3373(CP002688|pid:none) Arabidopsis thaliana chromosome... 43 0.040
CU928180_42(CU928180|pid:none) Kluyveromyces thermotolerans stra... 43 0.040
FR823393_498(FR823393|pid:none) Neospora caninum Liverpool compl... 43 0.040
CU638744_128(CU638744|pid:none) Podospora anserina S mat+ genomi... 43 0.040
(O04656) RecName: Full=Putative nucleolar protein 5-3; AltName: ... 43 0.040
HE580271_46(HE580271|pid:none) Naumovozyma dairenensis CBS 421 c... 43 0.052
(A7TIF5) RecName: Full=Nucleolar protein 58; 43 0.052
(Q12499) RecName: Full=Nucleolar protein 58; AltName: Full=Nucle... 43 0.052
(A6ZPE5) RecName: Full=Nucleolar protein 58; AltName: Full=Nucle... 43 0.052
FM992693_31(FM992693|pid:none) Candida dubliniensis CD36 chromos... 43 0.052
AK023975_1(AK023975|pid:none) Homo sapiens cDNA FLJ13913 fis, cl... 43 0.052
AE016816_62(AE016816|pid:none) Ashbya gossypii ATCC 10895 chromo... 43 0.052
AM920428_1468(AM920428|pid:none) Penicillium chrysogenum Wiscons... 43 0.052
CR382124_510(CR382124|pid:none) Kluyveromyces lactis strain NRRL... 42 0.089
HE605202_344(HE605202|pid:none) Candida parapsilosis strain CDC3... 42 0.089
(Q59S06) RecName: Full=Nucleolar protein 58; 42 0.089
CR380947_165(CR380947|pid:none) Candida glabrata strain CBS138 c... 42 0.089
CR382139_279(CR382139|pid:none) Debaryomyces hansenii strain CBS... 42 0.12
CP003008_186(CP003008|pid:none) Myceliophthora thermophila ATCC ... 41 0.15
CP000254_2189(CP000254|pid:none) Methanospirillum hungatei JF-1,... 41 0.20
AY553910_1(AY553910|pid:none) Brassica juncea putative preRNA pr... 41 0.20
AK367179_1(AK367179|pid:none) Hordeum vulgare subsp. vulgare mRN... 37 3.8
GQ900386_19(GQ900386|pid:none) Staphylococcus sp. CDC3 plasmid S... 36 6.4
>AC150800_1(AC150800|pid:none) Medicago truncatula chromosome 7 clone
mth2-77m9, complete sequence.
Length = 484
Score = 162 bits (409), Expect = 6e-38
Identities = 104/270 (38%), Positives = 155/270 (57%), Gaps = 9/270 (3%)
Frame = +2
Query: 653 SVLMGSSIASKLIGIAGSIQQLANIPAGHLQTLGADKKALAGFSGMSNRKFQMGLISQCD 832
S ++GS++A+KL+G AG + LA +PA ++Q LGA KK LAGFS +++ F +G I Q +
Sbjct: 221 SAIVGSAVAAKLMGTAGGLSALAKMPACNVQLLGAKKKNLAGFSTATSQ-FHVGYIEQTE 279
Query: 833 IVKKAPPFLQVKALRTLTGRVSIAARVDA-QQDSSFYGETGRQYRDEILAKIEKWQEPPP 1009
I + PP +++A R + + ++AARVD+ + D S G+TGR +DEI KIEKWQEPPP
Sbjct: 280 IFQTTPPSFRMRACRLVAAKSTLAARVDSIRGDPS--GKTGRSLKDEIHKKIEKWQEPPP 337
Query: 1010 QKQDKALPAPEEXXXXXXXXXXXXLYKQKYGVTDFQKAKNRMSFGVEEKT---XXXXXXX 1180
KQ K LP P+ K++Y +TD +K NRM FG+ E++
Sbjct: 338 AKQPKPLPVPDSEPKKKRGGRRLRKMKERYAITDMRKLANRMQFGIPEESSLGDGLGEGY 397
Query: 1181 XXXXXXXXXKVRLVAQERGILKK--KKLEQKNYGGSMTSASTSGL-ASVAITPVQGLQLS 1351
K+R+ A + + K KK ++K+YG +S +TSGL +S+A TPVQG++LS
Sbjct: 398 GMLGQAGSGKLRVSAGQSKLAAKVAKKFKEKSYG---SSGATSGLTSSLAFTPVQGIELS 454
Query: 1352 ITQNIREQ--DNKTEKYFSSSSFKNKRKLN 1435
Q Q YFS + +K + N
Sbjct: 455 NPQAHAHQLGSGTQSTYFSETGTFSKIQKN 484
Score = 78.2 bits (191), Expect = 1e-12
Identities = 34/64 (53%), Positives = 49/64 (76%)
Frame = +3
Query: 450 QDSEEHKLIVECNQMAQEIQHEIYLIHKFVRERYSKKFPELESSVQNPLDYINCVKRIKN 629
+D E++LIVECN ++ +I++EI +IH F+R++Y KFPELES V +P+DY VK+I N
Sbjct: 88 EDDPEYQLIVECNALSVDIENEIVIIHNFIRDKYRLKFPELESLVHHPIDYARVVKKIGN 147
Query: 630 ENDL 641
E DL
Sbjct: 148 EMDL 151
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 5349213
Number of Hits to DB: 2,782,068,945
Number of extensions: 48960168
Number of successful extensions: 117608
Number of sequences better than 10.0: 276
Number of HSP's gapped: 117292
Number of HSP's successfully gapped: 318
Length of query: 482
Length of database: 1,732,582,204
Length adjustment: 136
Effective length of query: 346
Effective length of database: 1,005,089,236
Effective search space: 347760875656
Effective search space used: 347760875656
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 32 (16.9 bits)
Dictyostelium discoideum cDNA Project Home