Dictyostelium discoideum cDNA Clone AFO514

Sequence AFO514

GAAAGAAATA CAATAATAAA TTAATGTCAA CATTAGCAGA TAGATTTTTA
GATGATTTTA ATGATGGTGA AGATGCATTA GTAGATTATG GATTAGGAAA
AAGTAATGAA AATAATAGTT TATCAAATGA TTTCATTAAT GATTTTGGTG
GTGAGGAAGA TAATAACAAT AATAATAATG AAAATTCCAC TACTACAACT
ACTACAACTA CTACTACAAA TATAAATATA AAGGATGATG ATAATGATAC
ATTAATGGGA GATCAAGATG ATTTAATGTT ATCAGATGAA ATGATTGAAA
AGAAACAAAT TGAATTAATT AATAAACATA AAGATGCACC AATTGAATCA
ATTGCAAAAT TAAACAATTC AAATAAATTA ACATCATTAT TAACTCGTGT
AAAAAATCAA ATGATAAAGA GTTTACCTGA AAAAGGTGTT AAAACAGGTC
AAGATTCTGA AGAACATAAA TTAATCGTTG AATGTAATCA AATGGCTCAA
GAGATTCAAC ATGAAATTTA TTTAATTCAT AAATTTGTTC GTGAAAGATA
TTCAAAAAAA TTCCCTGAAT TAGAAAGTTC CGTTCAAAAT CCATTAGATT
ATATAAATTG TGTTAAAAGA ATTAAAAATG AAAATGATTT A---------
-ATCAGTATT GATGGGAAGT AGTATAGCAT CTAAATTAAT TGGTATAGCA
GGTTCAATTC AACAATTAGC AAATATTCCA GCTGGTCATT TACAAACATT
AGGTGCTGAT AAGAAAGCAT TGGCAGGTTT TAGTGGTATG TCAAATAGAA
AGTTTCAAAT GGGTTTAATT TCACAATGTG ATATTGTAAA GAAAGCACCA
CCATTCTTAC AAGTTAAAGC ATTACGTACT CTAACTGGTA GAGTATCGAT
TGCTGCAAGA GTTGATGCTC AACAAGATTC ATCATTCTAT GGTGAAACAG
GTAGACAATA TCGTGATGAA ATTTTAGCTA AAATTGAGAA ATGGCAAGAA
CCACCACCTC AAAAACAAGA TAAAGCACTA CCTGCCCCTG AAGAGGGTAA
GAGAACCAAG AGAGGTGGTA AAAAGGCTAG ACTATACAAA CAGAAATATG
GTGTCACCGA TTTTCAAAAA GCTAAAAATC GTATGTCCTT TGGTGTTGAA
GAGAAAACTA TAGGTGAAAG TGGTATTGGT TTAGGTATGA TTGGTGGTGA
AAGTGGTAAA GTAAGACTGG TTGCTCAAGA AAGAGGTATC CTAAAGAAAA
AGAAATTGGA ACAAAAAAAT TATGGTGGTT CTATGACTTC TGCTTCAACT
AGTGGTCTTG CAAGTGTTGC CATTACTCCT GTACAAGGCT TACAACTTTC
TATTACTCAA AATATACGTG AACAAGATAA TAAAACTGAA AAATATTTTT
CATCTTCTAG TTTTAAAAAT AAAAGAAAAC TNAACAATAA ATAAAA

Translated Amino Acid Sequence AFO514

KKYNNKLMSTLADRFLDDFNDGEDALVDYGLGKSNENNSLSNDFINDFGGEEDNNNNNNE
NSTTTTTTTTTTNINIKDDDNDTLMGDQDDLMLSDEMIEKKQIELINKHKDAPIESIAKL
NNSNKLTSLLTRVKNQMIKSLPEKGVKTGQDSEEHKLIVECNQMAQEIQHEIYLIHKFVR
ERYSKKFPELESSVQNPLDYINCVKRIKNENDL---

---SVLMGSSIASKLIGIAGSIQQLANIPAGHLQTLGADKKALAGFSGMSNRKFQMGLIS
QCDIVKKAPPFLQVKALRTLTGRVSIAARVDAQQDSSFYGETGRQYRDEILAKIEKWQEP
PPQKQDKALPAPEEGKRTKRGGKKARLYKQKYGVTDFQKAKNRMSFGVEEKTIGESGIGL
GMIGGESGKVRLVAQERGILKKKKLEQKNYGGSMTSASTSGLASVAITPVQGLQLSITQN
IREQDNKTEKYFSSSSFKNKRKLNNK*

Homology AFO514 vs CSM-cDNA

Sequences producing significant alignments:                      (bits) Value


AFO514 (AFO514Q) /CSM/AF/AFO5-A/AFO514Q.Seq.d/                       2288   0.0
SFC337 (SFC337Q) /CSM/SF/SFC3-B/SFC337Q.Seq.d/                       1447   0.0
AFA686 (AFA686Q) /CSM/AF/AFA6-D/AFA686Q.Seq.d/                       1277   0.0
SFG687 (SFG687Q) /CSM/SF/SFG6-D/SFG687Q.Seq.d/                       1150   0.0
CFI387 (CFI387Q) /CSM/CF/CFI3-D/CFI387Q.Seq.d/                       1146   0.0
SFB226 (SFB226Q) /CSM/SF/SFB2-B/SFB226Q.Seq.d/                       1112   0.0
VFO364 (VFO364Q) /CSM/VF/VFO3-C/VFO364Q.Seq.d/                        892   0.0
AFI509 (AFI509Q) /CSM/AF/AFI5-A/AFI509Q.Seq.d/                        874   0.0
AFA415 (AFA415Q) /CSM/AF/AFA4-A/AFA415Q.Seq.d/                        658   0.0
VSG271 (VSG271Q) /CSM/VS/VSG2-C/VSG271Q.Seq.d/                        365   1e-99

Homology AFO514 vs DNA

Sequences producing significant alignments:                    (bits)  Value  N


AC115604|AC115604.2 Dictyostelium discoideum chromosome 2 m...    44  7e-06  5
AF250284|AF250284.1 Amsacta moorei entomopoxvirus, complete...    38  2e-04  12
AF362369|AF362369.2 Dictyostelium discoideum histidine kina...    40  2e-04  5
Z98547|Z98547.2 Plasmodium falciparum MAL3P3.                     44  2e-04  9
AE014831|AE014831.1 Plasmodium falciparum 3D7 chromosome 10...    40  3e-04  9
AC005504|AC005504.3 Plasmodium falciparum chromosome 12, **...    48  3e-04  12
AC115598|AC115598.2 Dictyostelium discoideum chromosome 2 m...    42  3e-04  5
AZ162407|AZ162407.1 SP_0071_B2_D12_T7A Strongylocentrotus p...    48  5e-04  2
AE014823|AE014823.1 Plasmodium falciparum 3D7 chromosome 14...    44  9e-04  6
AE014820|AE014820.1 Plasmodium falciparum 3D7 chromosome 14...    40  9e-04  5

Homology AFO514 vs Protein

Sequences producing significant alignments:                      (bits) Value


AC150800_1(AC150800|pid:none) Medicago truncatula chromosome 7 c...   162   6e-38
AP004010_10(AP004010|pid:none) Oryza sativa Japonica Group genom...   151   8e-35
BT036493_1(BT036493|pid:none) Zea mays full-length cDNA clone ZM...   149   3e-34
BT054842_1(BT054842|pid:none) Zea mays full-length cDNA clone ZM...   149   3e-34
AK066109_1(AK066109|pid:none) Oryza sativa Japonica Group cDNA c...   148   7e-34
CP000584_134(CP000584|pid:none) Ostreococcus lucimarinus CCE9901...   143   2e-32
CR954202_367(CR954202|pid:none) Ostreococcus tauri strain OTTH05...   138   7e-31
CP001575_252(CP001575|pid:none) Micromonas sp. RCC299 chromosome...   138   9e-31
AB463201_1(AB463201|pid:none) Synthetic construct DNA, clone: pF...   136   3e-30
(Q8WWY3) RecName: Full=U4/U6 small nuclear ribonucleoprotein Prp...   135   6e-30

Homology AFO514 vs Genome