Homology AFO514 vs DNA
Query= AFO514 (AFO514Q) /CSM/AF/AFO5-A/AFO514Q.Seq.d/
(1446 letters)
Database: ddbjhum1.seq; ddbjhum10.seq; ddbjhum11.seq; ddbjhum12.seq;
ddbjhum13.seq; ddbjhum14.seq; ddbjhum15.seq; ddbjhum16.seq;
ddbjhum17.seq; ddbjhum18.seq; ddbjhum19.seq; ddbjhum2.seq;
ddbjhum20.seq; ddbjhum21.seq; ddbjhum3.seq; ddbjhum4.seq;
ddbjhum5.seq; ddbjhum6.seq; ddbjhum7.seq; ddbjhum8.seq; ddbjhum9.seq;
new_ddbjhum.seq; ddbjpri.seq; new_ddbjpri.seq; ddbjrod1.seq;
ddbjrod2.seq; ddbjrod3.seq; ddbjrod4.seq; ddbjrod5.seq; ddbjrod6.seq;
new_ddbjrod.seq; ddbjmam.seq; new_ddbjmam.seq; ddbjvrt1.seq;
ddbjvrt2.seq; new_ddbjvrt.seq; ddbjinv1.seq; ddbjinv2.seq;
ddbjinv3.seq; ddbjinv4.seq; ddbjinv5.seq; new_ddbjinv.seq;
ddbjpln1.seq; ddbjpln2.seq; ddbjpln3.seq; ddbjpln4.seq; ddbjpln5.seq;
ddbjpln6.seq; new_ddbjpln.seq; ddbjbct1.seq; ddbjbct2.seq;
ddbjbct3.seq; ddbjbct4.seq; ddbjbct5.seq; ddbjbct6.seq;
new_ddbjbct.seq; ddbjvrl1.seq; ddbjvrl2.seq; ddbjvrl3.seq;
new_ddbjvrl.seq; ddbjphg.seq; new_ddbjphg.seq; ddbjuna.seq;
new_ddbjuna.seq; ddbjgss1.seq; ddbjgss10.seq; ddbjgss11.seq;
ddbjgss12.seq; ddbjgss13.seq; ddbjgss14.seq; ddbjgss15.seq;
ddbjgss16.seq; ddbjgss17.seq; ddbjgss18.seq; ddbjgss19.seq;
ddbjgss2.seq; ddbjgss20.seq; ddbjgss21.seq; ddbjgss22.seq;
ddbjgss23.seq; ddbjgss24.seq; ddbjgss25.seq; ddbjgss26.seq;
ddbjgss27.seq; ddbjgss28.seq; ddbjgss29.seq; ddbjgss3.seq;
ddbjgss30.seq; ddbjgss31.seq; ddbjgss32.seq; ddbjgss33.seq;
ddbjgss34.seq; ddbjgss35.seq; ddbjgss36.seq; ddbjgss37.seq;
ddbjgss38.seq; ddbjgss39.seq; ddbjgss4.seq; ddbjgss40.seq;
ddbjgss41.seq; ddbjgss42.seq; ddbjgss43.seq; ddbjgss44.seq;
ddbjgss45.seq; ddbjgss46.seq; ddbjgss47.seq; ddbjgss48.seq;
ddbjgss49.seq; ddbjgss5.seq; ddbjgss50.seq; ddbjgss51.seq;
ddbjgss52.seq; ddbjgss53.seq; ddbjgss6.seq; ddbjgss7.seq;
ddbjgss8.seq; ddbjgss9.seq; new_ddbjgss1.seq; new_ddbjgss2.seq;
new_ddbjgss3.seq; new_ddbjgss4.seq; ddbjhtg1.seq; ddbjhtg10.seq;
ddbjhtg11.seq; ddbjhtg12.seq; ddbjhtg13.seq; ddbjhtg14.seq;
ddbjhtg15.seq; ddbjhtg16.seq; ddbjhtg17.seq; ddbjhtg18.seq;
ddbjhtg19.seq; ddbjhtg2.seq; ddbjhtg20.seq; ddbjhtg21.seq;
ddbjhtg22.seq; ddbjhtg23.seq; ddbjhtg24.seq; ddbjhtg25.seq;
ddbjhtg26.seq; ddbjhtg27.seq; ddbjhtg28.seq; ddbjhtg29.seq;
ddbjhtg3.seq; ddbjhtg30.seq; ddbjhtg31.seq; ddbjhtg32.seq;
ddbjhtg33.seq; ddbjhtg34.seq; ddbjhtg35.seq; ddbjhtg36.seq;
ddbjhtg37.seq; ddbjhtg38.seq; ddbjhtg39.seq; ddbjhtg4.seq;
ddbjhtg40.seq; ddbjhtg41.seq; ddbjhtg42.seq; ddbjhtg43.seq;
ddbjhtg44.seq; ddbjhtg45.seq; ddbjhtg46.seq; ddbjhtg47.seq;
ddbjhtg48.seq; ddbjhtg49.seq; ddbjhtg5.seq; ddbjhtg50.seq;
ddbjhtg51.seq; ddbjhtg52.seq; ddbjhtg6.seq; ddbjhtg7.seq;
ddbjhtg8.seq; ddbjhtg9.seq; new_ddbjhtg1.seq; new_ddbjhtg2.seq;
ddbjpat1.seq; ddbjpat2.seq; ddbjpat3.seq; ddbjpat4.seq; ddbjpat5.seq;
ddbjpat6.seq; ddbjpat7.seq; new_ddbjpat.seq; ddbjsts1.seq;
ddbjsts2.seq; new_ddbjsts.seq; ddbjsyn.seq; new_ddbjsyn.seq;
est_atha1.seq; new_est_atha1.seq; est_cele1.seq; new_est_cele1.seq;
est_drer1.seq; new_est_drer1.seq; est_dmel1.seq; new_est_dmel1.seq;
est_gmax1.seq; new_est_gmax1.seq; est_hum1.seq; est_hum2.seq;
est_hum3.seq; est_hum4.seq; new_est_hum1.seq; est_lesc1.seq;
new_est_lesc1.seq; est_mous1.seq; est_mous2.seq; est_mous3.seq;
new_est_mous1.seq; est_osat1.seq; new_est_osat1.seq; est_rnor1.seq;
new_est_rnor1.seq; est_xlae1.seq; new_est_xlae1.seq; est_zmay1.seq;
new_est_zmay1.seq; est_rest1.seq; est_rest2.seq; new_est_rest1.seq
24,929,324 sequences; P,631,589,963 total letters
Searching....................................................done
Score E
Sequences producing significant alignments: (bits) Value N
AC115604|AC115604.2 Dictyostelium discoideum chromosome 2 m... 44 7e-06 5
AF250284|AF250284.1 Amsacta moorei entomopoxvirus, complete... 38 2e-04 12
AF362369|AF362369.2 Dictyostelium discoideum histidine kina... 40 2e-04 5
Z98547|Z98547.2 Plasmodium falciparum MAL3P3. 44 2e-04 9
AE014831|AE014831.1 Plasmodium falciparum 3D7 chromosome 10... 40 3e-04 9
AC005504|AC005504.3 Plasmodium falciparum chromosome 12, **... 48 3e-04 12
AC115598|AC115598.2 Dictyostelium discoideum chromosome 2 m... 42 3e-04 5
AZ162407|AZ162407.1 SP_0071_B2_D12_T7A Strongylocentrotus p... 48 5e-04 2
AE014823|AE014823.1 Plasmodium falciparum 3D7 chromosome 14... 44 9e-04 6
AE014820|AE014820.1 Plasmodium falciparum 3D7 chromosome 14... 40 9e-04 5
AC117070|AC117070.2 Dictyostelium discoideum chromosome 2 m... 44 0.001 3
AC114258|AC114258.2 Dictyostelium discoideum chromosome 2 m... 42 0.001 4
AE001396|AE001396.1 Plasmodium falciparum 3D7 chromosome 2 ... 48 0.001 6
AC005139|AC005139.3 Plasmodium falciparum chromosome 12, **... 40 0.002 6
AL035475|AL035475.7 Plasmodium falciparum MAL4P2. 42 0.002 5
AC115592|AC115592.2 Dictyostelium discoideum chromosome 2 m... 42 0.002 4
AC115612|AC115612.2 Dictyostelium discoideum chromosome 2 m... 46 0.003 4
M16501|M16501.1 T.equiperdum barren region upstream from th... 36 0.003 4
AC141866|AC141866.7 Medicago truncatula clone mth2-12p22, W... 36 0.003 8
AE014837|AE014837.1 Plasmodium falciparum 3D7 chromosome 11... 44 0.003 3
AL109815|AL109815.2 Plasmodium falciparum DNA *** SEQUENCIN... 36 0.004 10
AJ581661|AJ581661.1 Dictyostelium discoideum partial dstB g... 40 0.004 4
AE014845|AE014845.1 Plasmodium falciparum 3D7 chromosome 12... 42 0.004 8
AE014825|AE014825.1 Plasmodium falciparum 3D7 chromosome 14... 44 0.004 6
AC116921|AC116921.2 Dictyostelium discoideum chromosome 2 m... 32 0.004 8
AE014817|AE014817.1 Plasmodium falciparum 3D7 chromosome 14... 42 0.005 10
M31058|M31058.1 Reovirus serotype 3 minor core protein lamb... 54 0.005 1
M24734|M24734.1 Reovirus serotype 1 minor core protein lamb... 54 0.005 1
AC116986|AC116986.2 Dictyostelium discoideum chromosome 2 m... 48 0.005 3
AC116564|AC116564.5 Homo sapiens BAC clone RP11-761E7 from ... 40 0.005 10
AB063521|AB063521.2 Wigglesworthia brevipalpis DNA, complet... 32 0.006 13
AF474335|AF474335.1 Dictyostelium discoideum ABC transporte... 42 0.006 2
AL109814|AL109814.1 Plasmodium falciparum DNA *** SEQUENCIN... 40 0.007 9
AL034558|AL034558.3 Plasmodium falciparum MAL3P2. 44 0.007 9
BU494586|BU494586.1 PfESToab65a11.y1 Plasmodium falciparum ... 38 0.007 4
BU496131|BU496131.1 PfESToac04c07.y1 Plasmodium falciparum ... 38 0.008 4
AC115599|AC115599.2 Dictyostelium discoideum chromosome 2 m... 44 0.011 3
AC116984|AC116984.2 Dictyostelium discoideum chromosome 2 m... 46 0.012 3
AE014849|AE014849.1 Plasmodium falciparum 3D7 chromosome 12... 48 0.014 7
AC116305|AC116305.2 Dictyostelium discoideum chromosome 2 m... 46 0.014 4
AE014819|AE014819.1 Plasmodium falciparum 3D7 chromosome 14... 42 0.014 6
AL495801|AL495801.1 T. brucei sheared genomic DNA clone 344... 40 0.017 3
U67923|U67923.1 Dictyostelium discoideum (pXi) mRNA, partia... 40 0.017 3
AL406913|AL406913.1 T3 end of clone AU0AA015B02 of library ... 48 0.018 2
AJ307410|AJ307410.1 Yarrowia lipolytica complete mitochondr... 40 0.018 6
BX005158|BX005158.3 Zebrafish DNA sequence *** SEQUENCING I... 38 0.019 8
AC004157|AC004157.8 Plasmodium falciparum chromosome 12 clo... 48 0.022 7
AE001402|AE001402.1 Plasmodium falciparum 3D7 chromosome 2 ... 42 0.023 4
BX000451|BX000451.4 Zebrafish DNA sequence from clone CH211... 44 0.023 8
AY159038|AY159038.1 Dictyostelium discoideum LvsB (lvsB) ge... 44 0.025 5
AE014827|AE014827.1 Plasmodium falciparum 3D7 chromosome 14... 40 0.026 9
BX324129|BX324129.3 Zebrafish DNA sequence *** SEQUENCING I... 38 0.027 9
AE014818|AE014818.1 Plasmodium falciparum 3D7 chromosome 14... 44 0.030 5
BX511309|BX511309.3 Zebrafish DNA sequence *** SEQUENCING I... 40 0.030 7
AP003131|AP003131.2 Staphylococcus aureus subsp. aureus N31... 34 0.031 14
BX324177|BX324177.4 Zebrafish DNA sequence *** SEQUENCING I... 36 0.032 9
AC004710|AC004710.3 Plasmodium falciparum chromosome 12, **... 40 0.032 7
AC010999|AC010999.6 Homo sapiens chromosome 15 clone RP11-3... 40 0.033 9
AJ131734|AJ131734.1 Plasmodium berghei DNA including upstre... 36 0.034 4
AC134242|AC134242.12 Medicago truncatula clone mth2-10p20, ... 40 0.035 7
AL953861|AL953861.5 Zebrafish DNA sequence from clone CH211... 38 0.035 8
AE014838|AE014838.1 Plasmodium falciparum 3D7 chromosome 11... 44 0.036 8
AC113802|AC113802.5 Rattus norvegicus clone CH230-293E22, *... 44 0.037 5
AE014846|AE014846.1 Plasmodium falciparum 3D7 chromosome 12... 42 0.038 8
AE014843|AE014843.1 Plasmodium falciparum 3D7 chromosome 11... 44 0.038 6
BX324218|BX324218.3 Zebrafish DNA sequence *** SEQUENCING I... 46 0.038 8
AC116956|AC116956.2 Dictyostelium discoideum chromosome 2 m... 48 0.042 3
AE014816|AE014816.1 Plasmodium falciparum 3D7 chromosome 14... 42 0.042 6
BX088722|BX088722.8 Zebrafish DNA sequence from clone CH211... 46 0.043 7
AC005507|AC005507.8 Plasmodium falciparum chromosome 12 clo... 40 0.043 6
BX539326|BX539326.3 Zebrafish DNA sequence *** SEQUENCING I... 36 0.044 8
AC116955|AC116955.2 Dictyostelium discoideum chromosome 2 m... 40 0.045 6
CG053091|CG053091.1 PUJCR94TD ZM_0.6_1.0_KB Zea mays genomi... 38 0.048 3
AL953866|AL953866.5 Zebrafish DNA sequence from clone DKEY-... 36 0.050 9
CA301787|CA301787.1 taa08a11.y1 Hydra cDNA library Hydra ma... 38 0.050 3
AC116977|AC116977.2 Dictyostelium discoideum chromosome 2 m... 44 0.052 3
AL732443|AL732443.6 Mouse DNA sequence from clone RP23-90H6... 40 0.052 8
BH146481|BH146481.1 ENTQL29TF Entamoeba histolytica Sheared... 38 0.056 2
AC116551|AC116551.2 Dictyostelium discoideum chromosome 2 m... 44 0.057 3
AL929188|AL929188.6 Zebrafish DNA sequence from clone CH211... 40 0.063 8
AC004153|AC004153.7 Plasmodium falciparum chromosome 12 clo... 44 0.064 6
BX004839|BX004839.5 Zebrafish DNA sequence *** SEQUENCING I... 40 0.066 5
AE014840|AE014840.1 Plasmodium falciparum 3D7 chromosome 11... 42 0.067 9
AF356600|AF356600.1 Dictyostelium discoideum filament-inter... 34 0.067 5
AC007967|AC007967.3 Homo sapiens clone NH0373F14, complete ... 40 0.067 8
AC018651|AC018651.4 Homo sapiens clone RP11-23E24, WORKING ... 40 0.068 9
AC142224|AC142224.2 Medicago truncatula clone mth2-20k24, c... 42 0.068 8
AE014844|AE014844.1 Plasmodium falciparum 3D7 chromosome 12... 40 0.069 9
U89350|U89350.1 Dictyostelium discoideum golvesin (gol) gen... 40 0.070 4
AP004172|AP004172.1 Mycoplasma penetrans genomic DNA, compl... 34 0.071 16
BX284684|BX284684.5 Zebrafish DNA sequence *** SEQUENCING I... 40 0.071 9
BX322786|BX322786.1 Zebrafish DNA sequence *** SEQUENCING I... 40 0.076 10
BX276112|BX276112.8 Zebrafish DNA sequence *** SEQUENCING I... 42 0.077 4
AC135607|AC135607.9 Pan troglodytes clone ptb-87o21, WORKIN... 50 0.078 1
AV364809|AV364809.1 Mus musculus 16 days embryo lung cDNA, ... 50 0.078 1
AF162332|AF162332.1 Plasmodium vinckei petteri circumsporoz... 50 0.078 1
AF286885|AF286885.1 Homo sapiens chromosome 8 clone RP5-109... 40 0.079 4
AC079474|AC079474.1 Mus musculus clone RP23-137A12, WORKING... 42 0.082 3
BX296526|BX296526.3 Zebrafish DNA sequence *** SEQUENCING I... 42 0.082 7
AC099657|AC099657.6 Rattus norvegicus clone CH230-58K24, WO... 46 0.088 6
>AC115604|AC115604.2 Dictyostelium discoideum chromosome 2 map
4354771-4414991 strain AX4, complete sequence.
Length = 60220
Score = 44.1 bits (22), Expect(3) = 59
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 160 ataataacaataataataatgaaaat 185
||||||| ||||||||||||||||||
Sbjct: 14007 ataataataataataataatgaaaat 13982
Score = 28.2 bits (14), Expect(5) = 7e-06
Identities = 14/14 (100%)
Strand = Plus / Minus
Query: 1146 ttgaagagaaaact 1159
||||||||||||||
Sbjct: 5343 ttgaagagaaaact 5330
Score = 28.2 bits (14), Expect(5) = 7e-06
Identities = 14/14 (100%)
Strand = Plus / Minus
Query: 623 taaaaatgaaaatg 636
||||||||||||||
Sbjct: 13919 taaaaatgaaaatg 13906
Score = 44.1 bits (22), Expect(5) = 7e-06
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 300 aagaaacaaattgaattaattaataa 325
||||||||||||||||||| ||||||
Sbjct: 41908 aagaaacaaattgaattaaataataa 41883
Score = 34.2 bits (17), Expect(5) = 7e-06
Identities = 20/21 (95%)
Strand = Plus / Minus
Query: 234 gatgatgataatgatacatta 254
||||||||| |||||||||||
Sbjct: 51910 gatgatgatgatgatacatta 51890
Score = 40.1 bits (20), Expect(5) = 7e-06
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 160 ataataacaataataataat 179
||||||||||||||||||||
Sbjct: 57183 ataataacaataataataat 57164
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Number of Hits to DB: 45945939
Number of Sequences: 24929324
Number of extensions: 45945939
Number of successful extensions: 5145071
Number of sequences better than 10.0: 2378
length of query: 1446
length of database: P,631,589,963
effective HSP length: 23
effective length of query: 1423
effective length of database: P,058,215,511
effective search space: 45618840672153
effective search space used: 45618840672153
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 10 (19.8 bits)
S1: 12 (24.3 bits)
S2: 21 (42.1 bits)
[blastall] WARNING: [000.000] Reached max 200 HSPs in BlastSaveCurrentHsp, continuing with this limit
ANTI-DNA BLAST search was processed by blast@nig.ac.jp, National Institute of Genetics, Japan.
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