Dictyostelium discoideum cDNA Clone AFO490

Sequence AFO490

---------- GGAAGAATCT TTTANAACTG CCAAAGAAAA AGGTATTCCA
CATCTTTTAA AAGTTTGCAT TGAATTCATT TCAAGAAGAA AAAATATTGA
AGGAATCTTT AGGATTAGCG GATCANAATT TTTAATCGAT GAAATTCAAT
CAAAATTCGA TAAAGGTTTA ATTACTTCAG TTGAAGATTT AGATCCAAAT
TGGATTTATG AAGTTGCATG TATTTTCAAA TCATATTTTA GATATTTACC
TCATTCAGTT ATTCCAGATG AACAAATTAC AGAATTTTAT AGAATTCAAA
ATAATATTAC AGATGCAACT GAAAAAGCAG CAGCATTAAA AGCAGTTGTT
AATTCAATTC CAAATTTCCA ATATACAATT CTTTATGAAT GTATATCTTN
AAAACATGAT ATTTCATTAA ACTCTAAAGA AAATTTAATG ACTNCAANTA
ATTTATCAAT TGTATATGGC CCTAGTTTAT TAAGACCAAA TATTGAAAAA
GGTGACATCC AAGAAATTGC AAATGCAAAT ACTATTGTAT TTAATTTAAT
TTCATTCTTT CAACAAATTT TTATCAAAAA TCCTGATCCT TCAATTTTAA
ANATTGAACA TCCAATTACT CCAA

Translated Amino Acid Sequence AFO490

---EESFXTAKEKGIPHLLKVCIEFISRRKNIEGIFRISGSXFLIDEIQSKFDKGLITSV
EDLDPNWIYEVACIFKSYFRYLPHSVIPDEQITEFYRIQNNITDATEKAAALKAVVNSIP
NFQYTILYECISXKHDISLNSKENLMTXXNLSIVYGPSLLRPNIEKGDIQEIANANTIVF
NLISFFQQIFIKNPDPSILXIEHPITP

Homology AFO490 vs CSM-cDNA

Sequences producing significant alignments:                      (bits) Value


AFO490 (AFO490Q) /CSM/AF/AFO4-D/AFO490Q.Seq.d/                       1181   0.0
VFM808 (VFM808Q) /CSM/VF/VFM8-A/VFM808Q.Seq.d/                       1150   0.0
SSE288 (SSE288Q) /CSM/SS/SSE2-D/SSE288Q.Seq.d/                        967   0.0
VSC242 (VSC242Q) /CSM/VS/VSC2-B/VSC242Q.Seq.d/                        819   0.0
SSF555 (SSF555Q) /CSM/SS/SSF5-C/SSF555Q.Seq.d/                        710   0.0
VHO791 (VHO791Q) /CSM/VH/VHO7-D/VHO791Q.Seq.d/                         38   0.16
CHF820 (CHF820Q) /CSM/CH/CHF8-A/CHF820Q.Seq.d/                         38   0.16
VHO671 (VHO671Q) /CSM/VH/VHO6-C/VHO671Q.Seq.d/                         36   0.61
VHK271 (VHK271Q) /CSM/VH/VHK2-C/VHK271Q.Seq.d/                         36   0.61
VHJ536 (VHJ536Q) /CSM/VH/VHJ5-B/VHJ536Q.Seq.d/                         36   0.61

Homology AFO490 vs DNA

Sequences producing significant alignments:                    (bits)  Value  N


BX511198|BX511198.8 Mouse DNA sequence from clone RP23-390P...    38  0.002  6
AC116957|AC116957.2 Dictyostelium discoideum chromosome 2 m...    32  0.002  13
AC116458|AC116458.9 Mus musculus, clone RP23-11L14, complet...    42  0.003  6
AL772212|AL772212.6 Mouse DNA sequence from clone RP23-80B1...    34  0.008  5
AZ199410|AZ199410.1 SP_1039_B1_E04_T7A Strongylocentrotus p...    38  0.010  2
AL158037|AL158037.8 Human DNA sequence *** SEQUENCING CANCE...    46  0.013  6
AC112198|AC112198.2 Homo sapiens chromosome 5 clone RP11-45...    52  0.028  3
AL672190|AL672190.14 Mouse DNA sequence from clone RP23-150...    34  0.030  7
AP001119|AP001119.1 Buchnera aphidicola str. APS (Acyrthosi...    34  0.030  9
AL844560|AL844560.5 Mouse DNA sequence from clone RP23-334M...    42  0.030  5

Homology AFO490 vs Protein

Sequences producing significant alignments:                      (bits) Value


(Q54PG5) RecName: Full=Rho GTPase-activating protein gacC; AltNa...   392   e-108
(Q54FG5) RecName: Full=Rho GTPase-activating protein gacJJ; AltN...    84   5e-15
AF159851_1(AF159851|pid:none) Homo sapiens Rho GAP p190-A mRNA, ...    82   1e-14
BC035541_1(BC035541|pid:none) Mus musculus glucocorticoid recept...    82   2e-14
(Q91YM2) RecName: Full=Rho GTPase-activating protein 35; AltName...    82   2e-14
BT072468_1(BT072468|pid:none) Salmo salar clone ssal-rgf-526-265...    82   2e-14
AK298356_1(AK298356|pid:none) Homo sapiens cDNA FLJ56603 complet...    81   3e-14
(Q9NRY4) RecName: Full=Rho GTPase-activating protein 35; AltName...    81   3e-14
(P83509) RecName: Full=Rho GTPase-activating protein 35; AltName...    81   3e-14
BC068777_1(BC068777|pid:none) Xenopus laevis hypothetical protei...    80   6e-14

Homology AFO490 vs Genome