Homology AFO409 vs DNA
Query= AFO409 (AFO409Q) /CSM/AF/AFO4-A/AFO409Q.Seq.d/
(1305 letters)
Database: ddbjhum1.seq; ddbjhum10.seq; ddbjhum11.seq; ddbjhum12.seq;
ddbjhum13.seq; ddbjhum14.seq; ddbjhum15.seq; ddbjhum16.seq;
ddbjhum17.seq; ddbjhum18.seq; ddbjhum19.seq; ddbjhum2.seq;
ddbjhum20.seq; ddbjhum21.seq; ddbjhum3.seq; ddbjhum4.seq;
ddbjhum5.seq; ddbjhum6.seq; ddbjhum7.seq; ddbjhum8.seq; ddbjhum9.seq;
new_ddbjhum.seq; ddbjpri.seq; new_ddbjpri.seq; ddbjrod1.seq;
ddbjrod2.seq; ddbjrod3.seq; ddbjrod4.seq; ddbjrod5.seq; ddbjrod6.seq;
new_ddbjrod.seq; ddbjmam.seq; new_ddbjmam.seq; ddbjvrt1.seq;
ddbjvrt2.seq; new_ddbjvrt.seq; ddbjinv1.seq; ddbjinv2.seq;
ddbjinv3.seq; ddbjinv4.seq; ddbjinv5.seq; new_ddbjinv.seq;
ddbjpln1.seq; ddbjpln2.seq; ddbjpln3.seq; ddbjpln4.seq; ddbjpln5.seq;
ddbjpln6.seq; new_ddbjpln.seq; ddbjbct1.seq; ddbjbct2.seq;
ddbjbct3.seq; ddbjbct4.seq; ddbjbct5.seq; ddbjbct6.seq;
new_ddbjbct.seq; ddbjvrl1.seq; ddbjvrl2.seq; ddbjvrl3.seq;
new_ddbjvrl.seq; ddbjphg.seq; new_ddbjphg.seq; ddbjuna.seq;
new_ddbjuna.seq; ddbjgss1.seq; ddbjgss10.seq; ddbjgss11.seq;
ddbjgss12.seq; ddbjgss13.seq; ddbjgss14.seq; ddbjgss15.seq;
ddbjgss16.seq; ddbjgss17.seq; ddbjgss18.seq; ddbjgss19.seq;
ddbjgss2.seq; ddbjgss20.seq; ddbjgss21.seq; ddbjgss22.seq;
ddbjgss23.seq; ddbjgss24.seq; ddbjgss25.seq; ddbjgss26.seq;
ddbjgss27.seq; ddbjgss28.seq; ddbjgss29.seq; ddbjgss3.seq;
ddbjgss30.seq; ddbjgss31.seq; ddbjgss32.seq; ddbjgss33.seq;
ddbjgss34.seq; ddbjgss35.seq; ddbjgss36.seq; ddbjgss37.seq;
ddbjgss38.seq; ddbjgss39.seq; ddbjgss4.seq; ddbjgss40.seq;
ddbjgss41.seq; ddbjgss42.seq; ddbjgss43.seq; ddbjgss44.seq;
ddbjgss45.seq; ddbjgss46.seq; ddbjgss47.seq; ddbjgss48.seq;
ddbjgss49.seq; ddbjgss5.seq; ddbjgss50.seq; ddbjgss51.seq;
ddbjgss52.seq; ddbjgss53.seq; ddbjgss6.seq; ddbjgss7.seq;
ddbjgss8.seq; ddbjgss9.seq; new_ddbjgss1.seq; new_ddbjgss2.seq;
new_ddbjgss3.seq; new_ddbjgss4.seq; ddbjhtg1.seq; ddbjhtg10.seq;
ddbjhtg11.seq; ddbjhtg12.seq; ddbjhtg13.seq; ddbjhtg14.seq;
ddbjhtg15.seq; ddbjhtg16.seq; ddbjhtg17.seq; ddbjhtg18.seq;
ddbjhtg19.seq; ddbjhtg2.seq; ddbjhtg20.seq; ddbjhtg21.seq;
ddbjhtg22.seq; ddbjhtg23.seq; ddbjhtg24.seq; ddbjhtg25.seq;
ddbjhtg26.seq; ddbjhtg27.seq; ddbjhtg28.seq; ddbjhtg29.seq;
ddbjhtg3.seq; ddbjhtg30.seq; ddbjhtg31.seq; ddbjhtg32.seq;
ddbjhtg33.seq; ddbjhtg34.seq; ddbjhtg35.seq; ddbjhtg36.seq;
ddbjhtg37.seq; ddbjhtg38.seq; ddbjhtg39.seq; ddbjhtg4.seq;
ddbjhtg40.seq; ddbjhtg41.seq; ddbjhtg42.seq; ddbjhtg43.seq;
ddbjhtg44.seq; ddbjhtg45.seq; ddbjhtg46.seq; ddbjhtg47.seq;
ddbjhtg48.seq; ddbjhtg49.seq; ddbjhtg5.seq; ddbjhtg50.seq;
ddbjhtg51.seq; ddbjhtg52.seq; ddbjhtg6.seq; ddbjhtg7.seq;
ddbjhtg8.seq; ddbjhtg9.seq; new_ddbjhtg1.seq; new_ddbjhtg2.seq;
ddbjpat1.seq; ddbjpat2.seq; ddbjpat3.seq; ddbjpat4.seq; ddbjpat5.seq;
ddbjpat6.seq; ddbjpat7.seq; new_ddbjpat.seq; ddbjsts1.seq;
ddbjsts2.seq; new_ddbjsts.seq; ddbjsyn.seq; new_ddbjsyn.seq;
est_atha1.seq; new_est_atha1.seq; est_cele1.seq; new_est_cele1.seq;
est_drer1.seq; new_est_drer1.seq; est_dmel1.seq; new_est_dmel1.seq;
est_gmax1.seq; new_est_gmax1.seq; est_hum1.seq; est_hum2.seq;
est_hum3.seq; est_hum4.seq; new_est_hum1.seq; est_lesc1.seq;
new_est_lesc1.seq; est_mous1.seq; est_mous2.seq; est_mous3.seq;
new_est_mous1.seq; est_osat1.seq; new_est_osat1.seq; est_rnor1.seq;
new_est_rnor1.seq; est_xlae1.seq; new_est_xlae1.seq; est_zmay1.seq;
new_est_zmay1.seq; est_rest1.seq; est_rest2.seq; new_est_rest1.seq
24,929,324 sequences; P,631,589,963 total letters
Searching....................................................done
Score E
Sequences producing significant alignments: (bits) Value N
AC109773|AC109773.4 Rattus norvegicus clone CH230-86J2, ***... 50 0.070 1
AC116957|AC116957.2 Dictyostelium discoideum chromosome 2 m... 48 0.28 1
BZ439413|BZ439413.1 BONNE28TR BO_1.6_2_KB_tot Brassica oler... 48 0.28 1
AC106303|AC106303.5 Rattus norvegicus clone CH230-99C14, **... 50 0.58 2
AC116984|AC116984.2 Dictyostelium discoideum chromosome 2 m... 44 0.60 13
AL158143|AL158143.14 Human DNA sequence from clone RP5-1074... 34 1.1 3
AC119094|AC119094.3 Rattus norvegicus clone CH230-181E9, **... 46 1.1 1
AC094459|AC094459.6 Rattus norvegicus clone CH230-4D4, *** ... 46 1.1 1
AC129365|AC129365.3 Rattus norvegicus clone CH230-186A6, WO... 46 1.1 1
BX649195|BX649195.1 Human DNA sequence *** SEQUENCING IN PR... 46 1.1 1
BM884644|BM884644.1 rc13e02.y1 Meloidogyne hapla egg pAMP1 ... 38 1.2 2
AC093470|AC093470.2 Mus musculus clone RP23-21J20, WORKING ... 36 1.4 6
AQ833612|AQ833612.1 HS_5441_A1_C08_T7A RPCI-11 Human Male B... 38 1.4 2
AC124344|AC124344.3 Mus musculus chromosome UNK clone RP24-... 34 2.1 6
AE007693|AE007693.1 Clostridium acetobutylicum ATCC824 sect... 34 2.1 4
AE010639|AE010639.1 Fusobacterium nucleatum subsp. nucleatu... 34 2.4 3
AL049691|AL049691.18 Human DNA sequence from clone RP5-1123... 38 2.8 7
AP004917|AP004917.1 Lotus corniculatus var. japonicus genom... 42 2.8 2
AC127635|AC127635.3 Rattus norvegicus clone CH230-160J2, **... 34 3.0 5
AC087672|AC087672.7 Homo sapiens chromosome 8, clone RP11-6... 40 3.2 4
AC116657|AC116657.3 Mus musculus clone RP23-289E18, complet... 34 4.0 7
AC097665|AC097665.7 Rattus norvegicus clone CH230-86C24, WO... 44 4.3 1
BB636999|BB636999.1 Mus musculus adult male aorta and vein ... 44 4.3 1
AC115427|AC115427.6 Rattus norvegicus clone CH230-207B16, W... 44 4.3 1
AC111838|AC111838.7 Rattus norvegicus clone CH230-170E2, WO... 44 4.3 1
BZ638741|BZ638741.1 OGCAL72TC ZM_0.7_1.5_KB Zea mays genomi... 44 4.3 1
AC133492|AC133492.9 Rattus norvegicus clone rp32-478o16, co... 44 4.3 1
BU033993|BU033993.1 QHJ2M17.yg.ab1 QH_EFGHJ sunflower RHA28... 44 4.3 1
AQ104135|AQ104135.1 HS_3109_A2_E06_T7 CIT Approved Human Ge... 44 4.3 1
AC108206|AC108206.3 Homo sapiens BAC clone RP11-203B7 from ... 44 4.6 2
AC099727|AC099727.2 Mus musculus clone RP23-353O3, WORKING ... 38 4.7 6
CC136123|CC136123.1 NDL.16G8.SP6 Notre Dame Liverpool Aedes... 40 5.0 2
AC006054|AC006054.2 Homo sapiens Xq28 BAC GS1-382P7 (Roswel... 46 5.1 3
AC096525|AC096525.7 Rattus norvegicus clone CH230-84N24, **... 34 5.3 7
BM884670|BM884670.1 rc13g04.y1 Meloidogyne hapla egg pAMP1 ... 38 5.4 2
BQ090347|BQ090347.1 rc64d07.y1 Meloidogyne hapla egg pAMP1 ... 38 5.5 2
BM902100|BM902100.1 rc32b10.y1 Meloidogyne hapla egg pAMP1 ... 38 5.7 2
BU094541|BU094541.1 rf69h04.y1 Meloidogyne hapla J2 pAMP1 v... 38 5.8 2
AC090257|AC090257.5 Homo sapiens chromosome 15, clone RP11-... 32 6.0 7
CA997024|CA997024.1 rg34h03.y1 Meloidogyne hapla J2 SL1 TOP... 38 6.2 2
AY040222|AY040222.1 Mus musculus Zf12 pseudogene, partial s... 38 7.4 2
AC137875|AC137875.3 Mus musculus clone RP23-62B15, WORKING ... 42 7.7 5
AC024657|AC024657.3 Homo sapiens chromosome 6 clone RP11-17... 36 7.7 6
AC099064|AC099064.2 Homo sapiens chromosome 1 clone RP4-754... 36 7.8 5
AY305026|AY305026.1 Halichoeres tenuispinis estrogen recept... 40 8.1 2
AX345147|AX345147.1 Sequence 218 from Patent WO0200928. 36 9.7 3
AC101490|AC101490.7 Mus musculus clone RP23-188O2, *** SEQU... 46 12 3
AC106166|AC106166.5 Rattus norvegicus clone CH230-103C12, *... 42 17 1
AC127248|AC127248.2 Mus musculus chromosome UNK clone RP24-... 42 17 1
AC101187|AC101187.1 Mus musculus clone RP23-176M3, LOW-PASS... 42 17 1
AC126107|AC126107.4 Rattus norvegicus clone CH230-30G16, **... 42 17 1
AL670001|AL670001.1 Neurospora crassa DNA linkage group II ... 42 17 1
AC005916|AC005916.2 Arabidopsis thaliana chromosome 1 BAC T... 42 17 1
AC134548|AC134548.3 Mus musculus chromosome UNK clone RP24-... 42 17 1
AV206828|AV206828.1 Mus musculus adult male testis cDNA, RI... 42 17 1
AV090515|AV090515.1 Mus musculus adult male tongue cDNA, pa... 42 17 1
AV045263|AV045263.2 Mus musculus adult male testis cDNA, pa... 42 17 1
AC133180|AC133180.1 Mus musculus chromosome UNK clone RP24-... 42 17 1
AC097192|AC097192.7 Rattus norvegicus clone CH230-174B15, *... 42 17 1
AZ860841|AZ860841.1 2M0167I04F Mouse 10kb plasmid UUGC1M li... 42 17 1
AL031665|AL031665.19 Human DNA sequence from clone RP4-545L... 42 17 1
AC068460|AC068460.2 Homo sapiens chromosome 4 clone RP11-70... 42 17 1
AG174537|AG174537.1 Pan troglodytes DNA, clone: RP43-044N07... 42 17 1
CC153716|CC153716.1 CSU-K34.118E10.SP6 CSU-K34 Aedes aegypt... 42 17 1
AC101559|AC101559.3 Mus musculus clone RP23-194K16, WORKING... 42 17 1
AC135017|AC135017.1 Mus musculus chromosome UNK clone RP24-... 42 17 1
AC134391|AC134391.2 Homo sapiens chromosome 15 clone CTD-23... 42 17 1
AC132732|AC132732.2 Rattus norvegicus clone CH230-344C16, *... 42 17 1
CC369439|CC369439.1 PUHIZ55TD ZM_0.6_1.0_KB Zea mays genomi... 42 17 1
AC068849|AC068849.2 Homo sapiens chromosome 12 clone RP11-3... 42 17 1
AC009662|AC009662.4 Homo sapiens chromosome 4 clone RP11-32... 42 17 1
BX228803|BX228803.1 Danio rerio genomic clone DKEY-260D23, ... 42 17 1
BH769960|BH769960.1 BMBAC369A01SP6_PSU Brugia malayi Genomi... 42 17 1
AV088625|AV088625.1 Mus musculus adult male tongue cDNA, pa... 42 17 1
AV040114|AV040114.2 Mus musculus adult male testis cDNA, pa... 42 17 1
BG507402|BG507402.1 sac58f08.y1 Gm-c1062 Glycine max cDNA c... 42 17 1
AC139053|AC139053.4 Mus musculus chromosome 1 clone RP23-2I... 42 17 1
AC131397|AC131397.5 Rattus norvegicus clone CH230-235N10, *... 42 17 1
AC120586|AC120586.5 Rattus norvegicus clone CH230-29E23, WO... 42 17 1
AF388203|AF388203.1 Apis mellifera major royal jelly protei... 42 17 1
AC073606|AC073606.19 Homo sapiens 12 BAC RP11-390N6 (Roswel... 42 17 1
AL928996|AL928996.5 Mouse DNA sequence *** SEQUENCING CANCE... 42 17 1
AL591965|AL591965.4 Human DNA sequence *** SEQUENCING CANCE... 42 17 1
AC092921|AC092921.6 Homo sapiens chromosome 3 clone RP11-21... 42 17 1
AQ955331|AQ955331.1 LERAD35TF LERA Arabidopsis thaliana gen... 42 17 1
BG937403|BG937403.1 AEGBR9 bulk 2 F2 midgut Aedes aegypti c... 42 17 1
AC073129|AC073129.1 Homo sapiens chromosome 5 clone RP11-65... 42 17 1
AC115345|AC115345.3 Rattus norvegicus clone CH230-108A22, *... 42 17 1
BH053480|BH053480.1 RPCI-24-308B4.TV RPCI-24 Mus musculus g... 42 17 1
AC137047|AC137047.1 Rattus norvegicus clone CH230-unknown, ... 42 17 1
AQ249090|AQ249090.1 T25A9-Sp6.2 TAMU Arabidopsis thaliana g... 42 17 1
AC108645|AC108645.5 Rattus norvegicus chromosome 18 clone C... 42 17 1
AV041568|AV041568.2 Mus musculus adult male testis cDNA, pa... 42 17 1
BB764822|BB764822.1 Mus musculus B16 F10Y cells cDNA, RIKEN... 42 17 1
AC021912|AC021912.3 Homo sapiens clone RP11-22I16, WORKING ... 42 17 1
BZ555932|BZ555932.1 pacs1-60_5429.y2 pacs1-60 Pseudomonas a... 42 17 1
M87278|M87278.1 Dictyostelium discoideum adenylyl cyclase g... 42 17 1
BU569931|BU569931.1 AGENCOURT_10400023 NIH_MGC_82 Homo sapi... 42 17 1
BH679068|BH679068.1 BOMNW37TR BO_2_3_KB Brassica oleracea g... 42 17 1
AL732295|AL732295.22 Mouse DNA sequence from clone RP23-77F... 42 42 5
>AC109773|AC109773.4 Rattus norvegicus clone CH230-86J2, *** SEQUENCING IN
PROGRESS ***, 5 unordered pieces.
Length = 248933
Score = 50.1 bits (25), Expect = 0.070
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 222 tacacataaatatttaaaagaatta 246
|||||||||||||||||||||||||
Sbjct: 231014 tacacataaatatttaaaagaatta 231038
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Number of Hits to DB: 31698794
Number of Sequences: 24929324
Number of extensions: 31698794
Number of successful extensions: 2989367
Number of sequences better than 10.0: 167
length of query: 1305
length of database: P,631,589,963
effective HSP length: 23
effective length of query: 1282
effective length of database: P,058,215,511
effective search space: 41098632285102
effective search space used: 41098632285102
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 10 (19.8 bits)
S1: 12 (24.3 bits)
S2: 21 (42.1 bits)
[blastall] WARNING: [000.000] Reached max 200 HSPs in BlastSaveCurrentHsp, continuing with this limit
ANTI-DNA BLAST search was processed by blast@nig.ac.jp, National Institute of Genetics, Japan.
Dictyostelium discoideum cDNA Project Home