Dictyostelium discoideum cDNA Clone AFO350

Sequence AFO350

TTGGCCTACT GGAAGGTCAT GTTATTGGNA TTGCACATAC AAGATGGGCA
ACTCATGGTG GTAAAACTGA TAAAAATGCA CATCCACATC TTGATTATAA
AGATAGAGTT GCAGTTATTC ATAATGGTGT AATTGAAAAT AATATTATAT
TAAAAGAAGA ACTTGAAAAG AAAGGTATTG TTTTTAGATC AGAAACTGAT
ACTGAAGTTA TTGCACAATT AATTGGTTTA TTTTTAGATC AAGGATTACA
AATTGTTGAT GCAATTAAAG AAACACAAAA GAAATTACAA GGTACATGGG
GTATTGCANT AGTTTGTAAG GATAATCCTG ATCAAATTGN AGCANCAAGA
AATGGNANTN CATTATTAAT TGNNATTGGA AAGGATNGNA TGNNNATTGN
NGNGAACCNN NNNNNTNTNN ANNANNTACN NNNNNNNNNA T---------
-ATTGTAAAT GCCGTTGGTT CATTGATTGC AAGAAGTTCA ATTTGTGGTG
TCTATTTAAA TGCAGGTCGT GAACATGCTG TAGCTTCAAC CAAAGCATTC
TCATCACAAG TTACAGTATT ATCATTGGTT GCAAATTGGT TCGCTCAACA
TAGAGGCATC GAAGAGGGTA AAAGACGTCA GTTAATCGAT TCTCTTCATC
GTTTACCAAC AAATTTGGGT ATGGCATTAC GTGTTCGTGA ACAATGTAAA
GCAATCGCTC AAAAAATTTA TAAAAAGAAT TCAATCTTTG TTTTGGGTAA
AGGTTTCGCT GAACCAATCG CATTTGAAGG TGCTTTGAAA ATTAAAGAAA
TCACCTATTG TCATGCTGAA GGTTATAGTG GTGGTGCTCT TAAACATGGT
CCATTCGCTC TCATTGAACA AGATACACCA ATTATCTTGA TCATTTTAGA
TGATAGTAAT TCTCCATTAA TGAGAGTCGC CGCTGAAGAA GTAAAAGCAA
GAGGTGCTCA TACTATCGTC ATTACAAATA ATTCAACTTT GGCTAAACAT
ATCGCTCATG ATACCATTTT AATTCCAAGT AATGGTATTT TAACTGCACT
TTTAGCTGCA ATTCCATTAC AATTATTAGC TTATGAAATG GCAATTTGTA
AAAATATTGA CCCAGNATCG TNCCAAAAAA TTAGCCAAAA C

Translated Amino Acid Sequence AFO350

GLLEGHVIGIAHTRWATHGGKTDKNAHPHLDYKDRVAVIHNGVIENNIILKEELEKKGIV
FRSETDTEVIAQLIGLFLDQGLQIVDAIKETQKKLQGTWGIAXVCKDNPDQIXAXRNGXX
LLIXIGKDXMXIXXNXXXXXXXXXXX---

---IVNAVGSLIARSSICGVYLNAGREHAVASTKAFSSQVTVLSLVANWFAQHRGIEEGK
RRQLIDSLHRLPTNLGMALRVREQCKAIAQKIYKKNSIFVLGKGFAEPIAFEGALKIKEI
TYCHAEGYSGGALKHGPFALIEQDTPIILIILDDSNSPLMRVAAEEVKARGAHTIVITNN
STLAKHIAHDTILIPSNGILTALLAAIPLQLLAYEMAICKNIDPXSXQKISQN

Homology AFO350 vs CSM-cDNA

Sequences producing significant alignments:                      (bits) Value


AFO350 (AFO350Q) /CSM/AF/AFO3-C/AFO350Q.Seq.d/                       1356   0.0
AFM651 (AFM651Q) /CSM/AF/AFM6-C/AFM651Q.Seq.d/                       1328   0.0
SSD124 (SSD124Q) /CSM/SS/SSD1-A/SSD124Q.Seq.d/                       1318   0.0
CFI829 (CFI829Q) /CSM/CF/CFI8-B/CFI829Q.Seq.d/                       1312   0.0
SFE659 (SFE659Q) /CSM/SF/SFE6-C/SFE659Q.Seq.d/                       1304   0.0
CFC248 (CFC248Q) /CSM/CF/CFC2-B/CFC248Q.Seq.d/                       1283   0.0
AFK592 (AFK592Q) /CSM/AF/AFK5-D/AFK592Q.Seq.d/                       1281   0.0
VFD470 (VFD470Q) /CSM/VF/VFD4-C/VFD470Q.Seq.d/                       1221   0.0
AFL243 (AFL243Q) /CSM/AF/AFL2-B/AFL243Q.Seq.d/                       1219   0.0
CFF878 (CFF878Q) /CSM/CF/CFF8-D/CFF878Q.Seq.d/                       1183   0.0

Homology AFO350 vs DNA

Sequences producing significant alignments:                  (bits) Value  N


(BJ345926) Dictyostelium discoideum cDNA clone:dda29d13, 3' ...  1356   0.0    1
(C92128) Dictyostelium discoideum slug cDNA, clone SSD124.       1310   0.0    1
(BJ347249) Dictyostelium discoideum cDNA clone:dda26e14, 3' ...  1308   0.0    2
(BJ375345) Dictyostelium discoideum cDNA clone:ddc18j08, 3' ...  1292   0.0    2
(BJ397992) Dictyostelium discoideum cDNA clone:dds10e16, 3' ...  1253   0.0    3
(BJ373933) Dictyostelium discoideum cDNA clone:ddc5o12, 3' e...  1253   0.0    3
(BJ343360) Dictyostelium discoideum cDNA clone:dda22g23, 3' ...  1245   0.0    3
(BJ430547) Dictyostelium discoideum cDNA clone:ddv7l18, 3' e...  1221   0.0    1
(BJ377342) Dictyostelium discoideum cDNA clone:ddc24a07, 3' ...  1162   0.0    1
(BJ372503) Dictyostelium discoideum cDNA clone:ddc12l20, 3' ...  1154   0.0    3

Homology AFO350 vs Protein

Sequences producing significant alignments:                      (bits) Value


FR823390_157(FR823390|pid:none) Neospora caninum Liverpool compl...   222   3e-56
AM910988_95(AM910988|pid:none) Plasmodium knowlesi strain H chro...   186   2e-45
CP002546_1372(CP002546|pid:none) Planctomyces brasiliensis DSM 5...   149   3e-34
CP000777_489(CP000777|pid:none) Leptospira biflexa serovar Patoc...   144   9e-33
HQ704802_171(HQ704802|pid:none) Organic Lake phycodnavirus 1 gen...   144   1e-32
CP002779_1861(CP002779|pid:none) Pyrococcus yayanosii CH1, compl...   144   1e-32
JO842616_1(JO842616|pid:none) TSA: Amblyomma maculatum Am-7274 m...   142   3e-32
CP002955_3982(CP002955|pid:none) Cyclobacterium marinum DSM 745,...   141   6e-32
CP001699_1986(CP001699|pid:none) Chitinophaga pinensis DSM 2588,...   141   6e-32
BC160581_1(BC160581|pid:none) Xenopus tropicalis glutamine-fruct...   141   8e-32

Homology AFO350 vs Genome