Dictyostelium discoideum cDNA Clone AFO187

Sequence AFO187

---------- CAGATAACAC CTACAAAGTA CTCGTCGATA ACAAAGAGAT
CCAAGCAGGT AACCTCGCTG ATGATTGGGA ATTACTTCCA TCAAAACAAA
TCAAAGATCC AAAACAATCC AAACCAGTCG ATTGGGTTGA CGTAAAGGAA
ATCGATGACC CAGAAGATGT TAAACCAGCC GGTCATGACG ATATCCCAGC
TTCAATCGTT GATCCAGAAG CTGTCAAACC AGAGGATTGG AATGAAGAAG
ACGACGGTGA ATGGGAAGCC CCAACCATCG CCAATCCAGA ATACAAAGGT
GAATGGAAAG CAAAGAAAAT CCCAAATCCA GAATACAAAG GTGAATGGGT
ACACCCATTA ATTGATAACC CAGAATACGC TGAAGACAAT GAACTCTACC
TCTTTAATGA TCTCGGTGCT ATCGGTTTCG AATTATGGCA AGTTAAATCT
GGTTCCATCT TTAACAATAT GATCGTCACC GACTCTGTCG AAGAAGCTAA
AGATTTCTCT GAAAAGACCT TTGTTGCCAA CCAAGAAGCC GAAAAGAAAA
TGTTTGACGA CCTCGAAGCC GCCAAAGCTG AAGAGAGAAA GAAAGCTGAC
GAAAAATTAG CTGCCGAAAA AGCTGCTGAA AAAGAAGCCG AAGAAGCTGA
TGAAGAAGAA GAAGAAGTCG CTGAAGAAGA TTTAGTTAAA ACTGATGACA
AAAAAGAAGA AGTCAAAAAA TCAACCAAAA AAGTNATCAN ACGAACTTTA
AANAAATAAA TAAA

Translated Amino Acid Sequence AFO187

---DNTYKVLVDNKEIQAGNLADDWELLPSKQIKDPKQSKPVDWVDVKEIDDPEDVKPAG
HDDIPASIVDPEAVKPEDWNEEDDGEWEAPTIANPEYKGEWKAKKIPNPEYKGEWVHPLI
DNPEYAEDNELYLFNDLGAIGFELWQVKSGSIFNNMIVTDSVEEAKDFSEKTFVANQEAE
KKMFDDLEAAKAEERKKADEKLAAEKAAEKEAEEADEEEEEVAEEDLVKTDDKKEEVKKS
TKKVIXRTLXK*i

Homology AFO187 vs CSM-cDNA

Sequences producing significant alignments:                      (bits) Value


VFE283 (VFE283Q) /CSM/VF/VFE2-D/VFE283Q.Seq.d/                       1122   0.0
SFH171 (SFH171Q) /CSM/SF/SFH1-C/SFH171Q.Seq.d/                       1122   0.0
AFO794 (AFO794Q) /CSM/AF/AFO7-D/AFO794Q.Seq.d/                       1122   0.0
AFO187 (AFO187Q) /CSM/AF/AFO1-D/AFO187Q.Seq.d/                       1122   0.0
AFN528 (AFN528Q) /CSM/AF/AFN5-B/AFN528Q.Seq.d/                       1122   0.0
AFK286 (AFK286Q) /CSM/AF/AFK2-D/AFK286Q.Seq.d/                       1122   0.0
AFI574 (AFI574Q) /CSM/AF/AFI5-D/AFI574Q.Seq.d/                       1122   0.0
AFH852 (AFH852Q) /CSM/AF/AFH8-C/AFH852Q.Seq.d/                       1122   0.0
AFG656 (AFG656Q) /CSM/AF/AFG6-C/AFG656Q.Seq.d/                       1122   0.0
AFF187 (AFF187Q) /CSM/AF/AFF1-D/AFF187Q.Seq.d/                       1122   0.0

Homology AFO187 vs DNA

Sequences producing significant alignments:                    (bits)  Value  N


U36937|U36937.1 Dictyostelium discoideum calreticulin mRNA,...  1114  0.0  1
BH160872|BH160872.1 ENTRI18TR Entamoeba histolytica Sheared...    80  7e-16  3
AZ543757|AZ543757.1 ENTGD24TR Entamoeba histolytica Sheared...    80  5e-11  1
AW033447|AW033447.1 EST277018 tomato callus, TAMU Lycopersi...    74  3e-09  1
AI489195|AI489195.1 EST247534 tomato ovary, TAMU Lycopersic...    74  3e-09  1
AW649196|AW649196.1 EST327650 tomato germinating seedlings,...    74  3e-09  1
AW626316|AW626316.1 EST320223 tomato radicle, 5 d post-imbi...    74  3e-09  1
BE459798|BE459798.1 EST415090 tomato developing/immature gr...    74  3e-09  1
AI771812|AI771812.1 EST252912 tomato ovary, TAMU Lycopersic...    74  3e-09  1
AI782264|AI782264.1 EST263143 tomato susceptible, Cornell L...    74  3e-09  1

Homology AFO187 vs Protein

Sequences producing significant alignments:                      (bits) Value


U36937_1(U36937|pid:none) Dictyostelium discoideum calreticulin ...   347   3e-94
FJ209028_1(FJ209028|pid:none) Lotharella amoeboformis calreticul...   228   3e-58
(Q9STD3) RecName: Full=Calreticulin; Flags: Precursor;  &AJ00076...   221   3e-56
(Q9XF98) RecName: Full=Calreticulin; Flags: Precursor;  &AF13473...   214   4e-54
JI169385_1(JI169385|pid:none) TSA: Ascaris suum ASCF_3886_1980 m...   212   1e-53
AF283816_1(AF283816|pid:none) Pinus taeda calreticulin mRNA, com...   211   2e-53
AK318734_1(AK318734|pid:none) Arabidopsis thaliana AT1G56340 mRN...   211   4e-53
CP002684_6164(CP002684|pid:none) Arabidopsis thaliana chromosome...   211   4e-53
HC747478_1(HC747478|pid:none) Sequence 4569 from Patent WO201004...   211   4e-53
GQ396798_1(GQ396798|pid:none) Ditylenchus destructor calreticuli...   209   9e-53

Homology AFO187 vs Genome