Homology AFO187 vs DNA
Query= AFO187 (AFO187Q) /CSM/AF/AFO1-D/AFO187Q.Seq.d/
(764 letters)
Database: ddbjhum1.seq; ddbjhum10.seq; ddbjhum11.seq; ddbjhum12.seq;
ddbjhum13.seq; ddbjhum14.seq; ddbjhum15.seq; ddbjhum16.seq;
ddbjhum17.seq; ddbjhum18.seq; ddbjhum19.seq; ddbjhum2.seq;
ddbjhum20.seq; ddbjhum21.seq; ddbjhum3.seq; ddbjhum4.seq;
ddbjhum5.seq; ddbjhum6.seq; ddbjhum7.seq; ddbjhum8.seq; ddbjhum9.seq;
new_ddbjhum.seq; ddbjpri.seq; new_ddbjpri.seq; ddbjrod1.seq;
ddbjrod2.seq; ddbjrod3.seq; ddbjrod4.seq; ddbjrod5.seq; ddbjrod6.seq;
new_ddbjrod.seq; ddbjmam.seq; new_ddbjmam.seq; ddbjvrt1.seq;
ddbjvrt2.seq; new_ddbjvrt.seq; ddbjinv1.seq; ddbjinv2.seq;
ddbjinv3.seq; ddbjinv4.seq; ddbjinv5.seq; new_ddbjinv.seq;
ddbjpln1.seq; ddbjpln2.seq; ddbjpln3.seq; ddbjpln4.seq; ddbjpln5.seq;
ddbjpln6.seq; new_ddbjpln.seq; ddbjbct1.seq; ddbjbct2.seq;
ddbjbct3.seq; ddbjbct4.seq; ddbjbct5.seq; ddbjbct6.seq;
new_ddbjbct.seq; ddbjvrl1.seq; ddbjvrl2.seq; ddbjvrl3.seq;
new_ddbjvrl.seq; ddbjphg.seq; new_ddbjphg.seq; ddbjuna.seq;
new_ddbjuna.seq; ddbjgss1.seq; ddbjgss10.seq; ddbjgss11.seq;
ddbjgss12.seq; ddbjgss13.seq; ddbjgss14.seq; ddbjgss15.seq;
ddbjgss16.seq; ddbjgss17.seq; ddbjgss18.seq; ddbjgss19.seq;
ddbjgss2.seq; ddbjgss20.seq; ddbjgss21.seq; ddbjgss22.seq;
ddbjgss23.seq; ddbjgss24.seq; ddbjgss25.seq; ddbjgss26.seq;
ddbjgss27.seq; ddbjgss28.seq; ddbjgss29.seq; ddbjgss3.seq;
ddbjgss30.seq; ddbjgss31.seq; ddbjgss32.seq; ddbjgss33.seq;
ddbjgss34.seq; ddbjgss35.seq; ddbjgss36.seq; ddbjgss37.seq;
ddbjgss38.seq; ddbjgss39.seq; ddbjgss4.seq; ddbjgss40.seq;
ddbjgss41.seq; ddbjgss42.seq; ddbjgss43.seq; ddbjgss44.seq;
ddbjgss45.seq; ddbjgss46.seq; ddbjgss47.seq; ddbjgss48.seq;
ddbjgss49.seq; ddbjgss5.seq; ddbjgss50.seq; ddbjgss51.seq;
ddbjgss52.seq; ddbjgss53.seq; ddbjgss6.seq; ddbjgss7.seq;
ddbjgss8.seq; ddbjgss9.seq; new_ddbjgss1.seq; new_ddbjgss2.seq;
new_ddbjgss3.seq; new_ddbjgss4.seq; ddbjhtg1.seq; ddbjhtg10.seq;
ddbjhtg11.seq; ddbjhtg12.seq; ddbjhtg13.seq; ddbjhtg14.seq;
ddbjhtg15.seq; ddbjhtg16.seq; ddbjhtg17.seq; ddbjhtg18.seq;
ddbjhtg19.seq; ddbjhtg2.seq; ddbjhtg20.seq; ddbjhtg21.seq;
ddbjhtg22.seq; ddbjhtg23.seq; ddbjhtg24.seq; ddbjhtg25.seq;
ddbjhtg26.seq; ddbjhtg27.seq; ddbjhtg28.seq; ddbjhtg29.seq;
ddbjhtg3.seq; ddbjhtg30.seq; ddbjhtg31.seq; ddbjhtg32.seq;
ddbjhtg33.seq; ddbjhtg34.seq; ddbjhtg35.seq; ddbjhtg36.seq;
ddbjhtg37.seq; ddbjhtg38.seq; ddbjhtg39.seq; ddbjhtg4.seq;
ddbjhtg40.seq; ddbjhtg41.seq; ddbjhtg42.seq; ddbjhtg43.seq;
ddbjhtg44.seq; ddbjhtg45.seq; ddbjhtg46.seq; ddbjhtg47.seq;
ddbjhtg48.seq; ddbjhtg49.seq; ddbjhtg5.seq; ddbjhtg50.seq;
ddbjhtg51.seq; ddbjhtg52.seq; ddbjhtg6.seq; ddbjhtg7.seq;
ddbjhtg8.seq; ddbjhtg9.seq; new_ddbjhtg1.seq; new_ddbjhtg2.seq;
ddbjpat1.seq; ddbjpat2.seq; ddbjpat3.seq; ddbjpat4.seq; ddbjpat5.seq;
ddbjpat6.seq; ddbjpat7.seq; new_ddbjpat.seq; ddbjsts1.seq;
ddbjsts2.seq; new_ddbjsts.seq; ddbjsyn.seq; new_ddbjsyn.seq;
est_atha1.seq; new_est_atha1.seq; est_cele1.seq; new_est_cele1.seq;
est_drer1.seq; new_est_drer1.seq; est_dmel1.seq; new_est_dmel1.seq;
est_gmax1.seq; new_est_gmax1.seq; est_hum1.seq; est_hum2.seq;
est_hum3.seq; est_hum4.seq; new_est_hum1.seq; est_lesc1.seq;
new_est_lesc1.seq; est_mous1.seq; est_mous2.seq; est_mous3.seq;
new_est_mous1.seq; est_osat1.seq; new_est_osat1.seq; est_rnor1.seq;
new_est_rnor1.seq; est_xlae1.seq; new_est_xlae1.seq; est_zmay1.seq;
new_est_zmay1.seq; est_rest1.seq; est_rest2.seq; new_est_rest1.seq
24,929,324 sequences; P,631,589,963 total letters
Searching...................................................done
Score E
Sequences producing significant alignments: (bits) Value N
U36937|U36937.1 Dictyostelium discoideum calreticulin mRNA,... 1114 0.0 1
BH160872|BH160872.1 ENTRI18TR Entamoeba histolytica Sheared... 80 7e-16 3
AZ543757|AZ543757.1 ENTGD24TR Entamoeba histolytica Sheared... 80 5e-11 1
AW033447|AW033447.1 EST277018 tomato callus, TAMU Lycopersi... 74 3e-09 1
AI489195|AI489195.1 EST247534 tomato ovary, TAMU Lycopersic... 74 3e-09 1
AW649196|AW649196.1 EST327650 tomato germinating seedlings,... 74 3e-09 1
AW626316|AW626316.1 EST320223 tomato radicle, 5 d post-imbi... 74 3e-09 1
BE459798|BE459798.1 EST415090 tomato developing/immature gr... 74 3e-09 1
AI771812|AI771812.1 EST252912 tomato ovary, TAMU Lycopersic... 74 3e-09 1
AI782264|AI782264.1 EST263143 tomato susceptible, Cornell L... 74 3e-09 1
BE435540|BE435540.1 EST406618 tomato breaker fruit, TIGR Ly... 74 3e-09 1
AW932476|AW932476.1 EST358319 tomato fruit mature green, TA... 74 3e-09 1
BI921109|BI921109.1 EST541012 tomato callus Lycopersicon es... 74 3e-09 1
BI435832|BI435832.1 EST538593 P. infestans-challenged potat... 70 4e-08 1
BG124248|BG124248.1 EST469894 tomato shoot/meristem Lycoper... 64 5e-08 2
AW216727|AW216727.1 EST295441 tomato callus, TAMU Lycopersi... 66 7e-07 1
BI433620|BI433620.1 EST536381 P. infestans-challenged potat... 66 7e-07 1
BF188455|BF188455.1 EST444742 potato stolon, Cornell Univer... 66 7e-07 1
BM108705|BM108705.1 EST556241 potato roots Solanum tuberosu... 66 7e-07 1
BI323065|BI323065.1 kt68h08.y1 Strongyloides ratti L2 pAMP1... 48 9e-07 2
BI397006|BI397006.1 kt59a04.y3 Strongyloides ratti L2 pAMP1... 48 9e-07 2
BE579929|BE579929.1 kq34e07.y1 TBN95TM-SSR Strongyloides st... 46 3e-06 2
BG227351|BG227351.1 kq05f11.y1 TBN95TM-SSR Strongyloides st... 46 3e-06 2
BE581471|BE581471.1 kq46c08.y1 TBN95TM-SSR Strongyloides st... 46 3e-06 2
BG227102|BG227102.1 kp97a11.y1 TBN95TM-SSR Strongyloides st... 46 3e-06 2
BE581949|BE581949.1 kq56g07.y1 TBN95TM-SSR Strongyloides st... 46 3e-06 2
BG226953|BG226953.1 kq01e11.y1 TBN95TM-SSR Strongyloides st... 46 3e-06 2
BE579189|BE579189.1 kq23g03.y1 TBN95TM-SSR Strongyloides st... 46 3e-06 2
CB562682|CB562682.1 AGENCOURT_13329986 NICHD_XGC_Tad1 Xenop... 36 8e-06 4
BG226715|BG226715.1 kp92f10.y1 TBN95TM-SSFH Strongyloides s... 46 4e-05 2
BQ733856|BQ733856.1 AGENCOURT_8115166 NICHD_XGC_Emb4 Xenopu... 36 4e-05 3
AI899646|AI899646.1 EST269089 tomato susceptible, Cornell L... 60 4e-05 1
AW496649|AW496649.1 kp04f10.y1 TBN95TM-SSFH Strongyloides s... 46 4e-05 2
BG227691|BG227691.1 kq14d02.y1 TBN95TM-SSR Strongyloides st... 46 4e-05 2
BE581638|BE581638.1 kq48f11.y1 TBN95TM-SSR Strongyloides st... 46 4e-05 2
BG227674|BG227674.1 kq14a02.y1 TBN95TM-SSR Strongyloides st... 46 4e-05 2
BE224348|BE224348.1 kp60e07.y1 TBN95TM-SSFH Strongyloides s... 46 5e-05 2
CD204455|CD204455.1 HS1_8_G10.b1_A012 Heat-shocked seedling... 48 5e-05 2
CA523184|CA523184.1 KS12019E03 KS12 Capsicum annuum cDNA, m... 44 9e-05 3
AP004932|AP004932.1 Lotus corniculatus var. japonicus genom... 58 2e-04 1
BE459209|BE459209.1 EST414501 tomato developing/immature gr... 58 2e-04 1
AV417923|AV417923.1 Lotus corniculatus var. japonicus cDNA ... 58 2e-04 1
BM065644|BM065644.1 KS07005H02 KS07 Capsicum annuum cDNA, m... 44 2e-04 3
BM067121|BM067121.1 KS07021H12 KS07 Capsicum annuum cDNA, m... 44 2e-04 3
BM065928|BM065928.1 KS07008H11 KS07 Capsicum annuum cDNA, m... 44 2e-04 3
CB251368|CB251368.1 694 Aedes aegypti (Red) midgut cDNA lib... 50 3e-04 2
BM065370|BM065370.1 KS07002H02 KS07 Capsicum annuum cDNA, m... 44 3e-04 3
AW503560|AW503560.1 UI-HF-BN0-aky-e-10-0-UI.r1 NIH_MGC_50 H... 44 5e-04 3
BG224408|BG224408.1 kp46b01.y1 TBN95TM-SSFH Strongyloides s... 42 6e-04 2
BQ516982|BQ516982.1 EST624397 Generation of a set of potato... 56 7e-04 1
AF466603|AF466603.1 Aedes aegypti isolate AEA_CLU39 putativ... 50 7e-04 2
BE580119|BE580119.1 kq37d07.y1 TBN95TM-SSR Strongyloides st... 40 7e-04 2
AJ001621|AJ001621.1 Litomosoides sigmodontis mRNA for RAL-1... 36 8e-04 4
X80756|X80756.1 C.annuum PCRTC mRNA. 44 0.002 3
BQ726486|BQ726486.1 AGENCOURT_8100320 NICHD_XGC_Emb2 Xenopu... 36 0.002 3
BQ728990|BQ728990.1 AGENCOURT_8100158 NICHD_XGC_Emb2 Xenopu... 36 0.002 3
BI205709|BI205709.1 EST523749 cTOS Lycopersicon esculentum ... 54 0.003 1
BM412790|BM412790.1 EST587117 tomato breaker fruit Lycopers... 54 0.003 1
BI205351|BI205351.1 EST523391 cTOS Lycopersicon esculentum ... 54 0.003 1
BE436854|BE436854.1 EST407972 tomato breaker fruit, TIGR Ly... 54 0.003 1
CA411413|CA411413.1 E712_F -P normal and proteoid roots 7 a... 50 0.003 2
X67597|X67597.1 X.laevis mRNA for calreticulin (clone 3). 36 0.004 3
AI054701|AI054701.1 coau0001M04 Cotton Boll Abscission Zone... 48 0.012 2
BC044068|BC044068.1 Xenopus laevis, Similar to calreticulin... 36 0.012 3
AY336743|AY336743.1 Brassica rapa subsp. pekinensis calreti... 48 0.021 2
BF797770|BF797770.1 602257527F1 NIH_MGC_85 Homo sapiens cDN... 40 0.022 3
AY150370|AY150370.1 Cotesia rubecula calreticulin mRNA, com... 48 0.025 2
AA316001|AA316001.1 EST187752 Colon carcinoma (HCC) cell li... 44 0.032 2
AW500050|AW500050.1 UI-HF-BN0-akl-a-08-0-UI.r1 NIH_MGC_50 H... 44 0.033 2
AW503242|AW503242.1 UI-HF-BN0-aku-b-11-0-UI.r1 NIH_MGC_50 H... 44 0.033 2
BG405075|BG405075.1 sac47g05.y1 Gm-c1062 Glycine max cDNA c... 42 0.034 2
BU429271|BU429271.1 UI-HF-BN0-aeq-c-03-0-UI.r1 NIH_MGC_50 H... 44 0.036 2
BM094199|BM094199.1 sah26f01.y1 Gm-c1036 Glycine max cDNA c... 42 0.040 2
AW997013|AW997013.1 QV3-BN0047-140400-153-e11 BN0047 Homo s... 44 0.040 2
AF134733|AF134733.1 Prunus armeniaca calcium-binding protei... 50 0.041 1
BE077058|BE077058.1 RC5-BT0603-220200-013-E01 BT0603 Homo s... 44 0.041 2
AW508066|AW508066.1 si49f01.y1 Gm-r1030 Glycine max cDNA cl... 42 0.044 2
CD704233|CD704233.1 EST20760 human nasopharynx Homo sapiens... 44 0.046 2
AL043304|AL043304.1 Homo sapiens mRNA; EST DKFZp434N1323_r1... 44 0.051 2
CB986736|CB986736.1 AGENCOURT_13666396 NIH_MGC_184 Homo sap... 44 0.053 2
BQ438056|BQ438056.1 AGENCOURT_7890537 NIH_MGC_72 Homo sapie... 44 0.058 2
BU508948|BU508948.1 AGENCOURT_10100080 NIH_MGC_71 Homo sapi... 44 0.061 2
BQ212629|BQ212629.1 AGENCOURT_7588765 NIH_MGC_68 Homo sapie... 44 0.063 2
BG290815|BG290815.1 602389152F1 NIH_MGC_93 Homo sapiens cDN... 44 0.063 2
CD299913|CD299913.1 AGENCOURT_14251664 NIH_MGC_180 Homo sap... 44 0.063 2
BX451536|BX451536.1 human full-length cDNA 5-PRIME end of c... 44 0.064 2
BM913809|BM913809.1 AGENCOURT_6612704 NIH_MGC_98 Homo sapie... 44 0.076 2
BF614102|BF614102.1 dg25f10.y1 Xenopus laevis gastrula non ... 36 0.094 3
AW600676|AW600676.1 ESTPMC014 Penaeus monodon's total hemoc... 32 0.10 3
M98452|M98452.1 Human calnexin mRNA, complete cds. 44 0.10 2
BG553127|BG553127.1 dab76a06.y1 NICHD_XGC_Emb4 Xenopus laev... 36 0.12 2
AJ271880|AJ271880.1 Homo sapiens mRNA for calnexin (CANX ge... 44 0.12 2
U20502|U20502.1 Glycine max calnexin mRNA, complete cds. 42 0.12 2
BI450663|BI450663.1 kt73a11.y4 Strongyloides ratti L2 pAMP1... 42 0.14 2
L18887|L18887.1 Human calnexin mRNA, complete cds. 44 0.14 2
AV419401|AV419401.1 Lotus corniculatus var. japonicus cDNA ... 48 0.16 1
CB206713|CB206713.1 AGENCOURT_11373825 NICHD_XGC_Tad1 Xenop... 36 0.20 2
BG766903|BG766903.1 602740894F1 NIH_MGC_49 Homo sapiens cDN... 44 0.20 2
CD254306|CD254306.1 AGENCOURT_14215940 NICHD_XGC_Eye1 Xenop... 36 0.22 2
AC107415|AC107415.4 Rattus norvegicus clone CH230-198C24, *... 46 0.23 2
>U36937|U36937.1 Dictyostelium discoideum calreticulin mRNA, complete
cds.
Length = 1363
Score = 1114 bits (562), Expect = 0.0
Identities = 565/566 (99%)
Strand = Plus / Plus
Query: 11 cagataacacctacaaagtactcgtcgataacaaagagatccaagcaggtaacctcgctg 70
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 578 cagataacacctacaatgtactcgtcgataacaaagagatccaagcaggtaacctcgctg 637
Query: 71 atgattgggaattacttccatcaaaacaaatcaaagatccaaaacaatccaaaccagtcg 130
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 638 atgattgggaattacttccatcaaaacaaatcaaagatccaaaacaatccaaaccagtcg 697
Query: 131 attgggttgacgtaaaggaaatcgatgacccagaagatgttaaaccagccggtcatgacg 190
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 698 attgggttgacgtaaaggaaatcgatgacccagaagatgttaaaccagccggtcatgacg 757
Query: 191 atatcccagcttcaatcgttgatccagaagctgtcaaaccagaggattggaatgaagaag 250
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 758 atatcccagcttcaatcgttgatccagaagctgtcaaaccagaggattggaatgaagaag 817
Query: 251 acgacggtgaatgggaagccccaaccatcgccaatccagaatacaaaggtgaatggaaag 310
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 818 acgacggtgaatgggaagccccaaccatcgccaatccagaatacaaaggtgaatggaaag 877
Query: 311 caaagaaaatcccaaatccagaatacaaaggtgaatgggtacacccattaattgataacc 370
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 878 caaagaaaatcccaaatccagaatacaaaggtgaatgggtacacccattaattgataacc 937
Query: 371 cagaatacgctgaagacaatgaactctacctctttaatgatctcggtgctatcggtttcg 430
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 938 cagaatacgctgaagacaatgaactctacctctttaatgatctcggtgctatcggtttcg 997
Query: 431 aattatggcaagttaaatctggttccatctttaacaatatgatcgtcaccgactctgtcg 490
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 998 aattatggcaagttaaatctggttccatctttaacaatatgatcgtcaccgactctgtcg 1057
Query: 491 aagaagctaaagatttctctgaaaagacctttgttgccaaccaagaagccgaaaagaaaa 550
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1058 aagaagctaaagatttctctgaaaagacctttgttgccaaccaagaagccgaaaagaaaa 1117
Query: 551 tgtttgacgacctcgaagccgccaaa 576
||||||||||||||||||||||||||
Sbjct: 1118 tgtttgacgacctcgaagccgccaaa 1143
Score = 48.1 bits (24), Expect = 0.16
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 283 aatccagaatacaaaggtgaatgg 306
||||||||||||||||||||||||
Sbjct: 892 aatccagaatacaaaggtgaatgg 915
Score = 48.1 bits (24), Expect = 0.16
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 325 aatccagaatacaaaggtgaatgg 348
||||||||||||||||||||||||
Sbjct: 850 aatccagaatacaaaggtgaatgg 873
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Number of Hits to DB: 10274716
Number of Sequences: 24929324
Number of extensions: 10274716
Number of successful extensions: 812905
Number of sequences better than 10.0: 310
length of query: 764
length of database: P,631,589,963
effective HSP length: 23
effective length of query: 741
effective length of database: P,058,215,511
effective search space: 23755137693651
effective search space used: 23755137693651
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 10 (19.8 bits)
S1: 12 (24.3 bits)
S2: 21 (42.1 bits)
[blastall] WARNING: [000.000] Reached max 200 HSPs in BlastSaveCurrentHsp, continuing with this limit
ANTI-DNA BLAST search was processed by blast@nig.ac.jp, National Institute of Genetics, Japan.
Dictyostelium discoideum cDNA Project Home