Dictyostelium discoideum cDNA Clone AFO183

Sequence AFO183

CACTGTTGGC CTACTGGTAT TTATATATAA TATTACACCC CATAACTAAT
AAAATGTCAT TCAATTCAAG AATTGAAACT ATTTCTCGTC ACTTAAGCAC
TGGACCAATT TTAGAATCAA ATCCAACTTC TGGATCAGTT AAATCAGGAG
ATGATATTGT AATTGTTGCA CCATTTCGTA CAGCAATTTG TAAAGCTAAA
AGAGGAGCAT TCAAAGAGAC AGCACCAGAT GATTTATTAG CACCAGTTAT
TAAACATATT ATCAAAGTTA CCAAATTAGA TCCAAAATTA ATTGGAGATG
TTGTTATGGG AGCAGTATTA CCAAGATCAT CACAAGGTGC AACCGAAGTT
AGAGTTGCCA CATTATTAGC AGGTTTACCA AAGGAAGTAC CATGTTATAC
AGTCAACAGA CAATGTTCAT CAGGTTTACA AGCAATTGCC AATTGTGCAG
CAGCAGTCAA AGCAGGTTTC TATGACATTG GTTTAGCAGG CGGTGTAGAA
TCAATGAGTT TAAATCCAAT GGCATGGGAT GGTGGTTTCA ACGAGGTTG-
---------C TGAAAATGTC GCAGAGCGTT TTGGTGTCAC CAGAAAAGAC
CAAGATGAAT TCTCTGTAAA TTCACACAAG AAGGCAGGTG CCGCCCAAAA
AGCAGGTAAA TTTGACGATG AAATCGTTCC AGTCACCGTA AAGACCGAGG
ATGGCAAAAC CATCGTCGTC GATAAAGACG AAGGTATCCG TGAGAAAACC
ACCGTTGCAG ATTTGGCCAA ATTAAAACCA GCTTTCAAAG AGGGTGGTAC
AACCACCGCT GGTAACTCTA GTCAAATGAG TGATGGTGCC GCCGCTTGTT
TAGTTATGAA AAGAAGTACC GCCGAAAGAT TGGGTCTCAA GGTTGAATTG
GTTTTCGTAG CTTTTGCTGC TGTCGGTGTC GAACCATCCA TTATGGGTAT
TGGTCCAGCC GTTGCAATTC CAGCCGCCTT AAAACAAGCT GGTCTCACCA
CTAAAGATAT CGACGTTTTT GAAATCAATG AAGCTTTTGC TTCTCAAGCA
TTTTACAGTT GTAAGGTTTT GGGTTTGGAT ATGAACAAAG TTAATCCAAA
TGGCTCTGGT ATCGCTTTAG GTCATCCATT AGGTGCTACT GGTGCCCGTC
AAATGGCTAC CATTTCAAGA GAATTACATC GTCGTAAAGG TAAATATGGT
GTAATCTCTA TGTGTATTGG TACGGCTTAG GTGCTGCAGC TGTTGTTCGT
ACAGAT

Translated Amino Acid Sequence AFO183

LLAYWYLYIILHPITNKMSFNSRIETISRHLSTGPILESNPTSGSVKSGDDIVIVAPFRT
AICKAKRGAFKETAPDDLLAPVIKHIIKVTKLDPKLIGDVVMGAVLPRSSQGATEVRVAT
LLAGLPKEVPCYTVNRQCSSGLQAIANCAAAVKAGFYDIGLAGGVESMSLNPMAWDGGFN
EV---

---ENVAERFGVTRKDQDEFSVNSHKKAGAAQKAGKFDDEIVPVTVKTEDGKTIVVDKDE
GIREKTTVADLAKLKPAFKEGGTTTAGNSSQMSDGAAACLVMKRSTAERLGLKVELVFVA
FAAVGVEPSIMGIGPAVAIPAALKQAGLTTKDIDVFEINEAFASQAFYSCKVLGLDMNKV
NPNGSGIALGHPLGATGARQMATISRELHRRKGKYGVISMCIGTA*vlqllfvq

Homology AFO183 vs CSM-cDNA

Sequences producing significant alignments:                      (bits) Value


AFO183 (AFO183Q) /CSM/AF/AFO1-D/AFO183Q.Seq.d/                       2430   0.0
SLG762 (SLG762Q) /CSM/SL/SLG7-C/SLG762Q.Seq.d/                       1368   0.0
SFI740 (SFI740Q) /CSM/SF/SFI7-B/SFI740Q.Seq.d/                       1364   0.0
CFC557 (CFC557Q) /CSM/CF/CFC5-C/CFC557Q.Seq.d/                       1362   0.0
SFB522 (SFB522Q) /CSM/SF/SFB5-A/SFB522Q.Seq.d/                       1354   0.0
CFF662 (CFF662Q) /CSM/CF/CFF6-C/CFF662Q.Seq.d/                       1352   0.0
CFF140 (CFF140Q) /CSM/CF/CFF1-B/CFF140Q.Seq.d/                       1348   0.0
SLH575 (SLH575Q) /CSM/SL/SLH5-D/SLH575Q.Seq.d/                       1344   0.0
SLG603 (SLG603Q) /CSM/SL/SLG6-A/SLG603Q.Seq.d/                       1344   0.0
CHB394 (CHB394Q) /CSM/CH/CHB3-D/CHB394Q.Seq.d/                       1344   0.0

Homology AFO183 vs DNA

Sequences producing significant alignments:                    (bits)  Value  N


AC116986|AC116986.2 Dictyostelium discoideum chromosome 2 m...  1316  0.0  4
CB005315|CB005315.1 VVC011E10_126660 An expressed sequence ...    60  1e-13  5
CB008288|CB008288.1 VVC055H06_148036 An expressed sequence ...    60  7e-12  4
AU089542|AU089542.1 Lotus corniculatus var. japonicus flowe...    44  2e-10  4
CF213585|CF213585.1 CGF1000794_F07 Vitis vinifera cv. caber...    60  3e-10  3
CD007738|CD007738.1 VVB078G11_334604 An expressed sequence ...    60  1e-08  2
AL439008|AL439008.1 T7 end of clone BD0AA001H03 of library ...    44  1e-08  4
BM065622|BM065622.1 KS07005E12 KS07 Capsicum annuum cDNA, m...    68  1e-08  2
CA515447|CA515447.1 KS09042A06 KS09 Capsicum annuum cDNA, m...    68  1e-08  2
CD716621|CD716621.1 VVB129E11_405541 An expressed sequence ...    60  1e-08  2

Homology AFO183 vs Protein

Sequences producing significant alignments:                      (bits) Value


AC116986_75(AC116986|pid:none) Dictyostelium discoideum chromoso...   407   0.0
AM474896_9(AM474896|pid:none) Vitis vinifera contig VV79X001698....   247   e-110
AB333797_1(AB333797|pid:none) Glycine max mRNA for peroxisomal 3...   244   e-109
X75329_1(X75329|pid:none) M.indica (Manila) THMF5 mRNA for 3-ket...   243   e-109
AK353358_1(AK353358|pid:none) Thellungiella halophila mRNA, comp...   249   e-108
S57792(S57792)acetyl-CoA C-acyltransferase (EC 2.3.1.16) B precu...   241   e-108
BT070433_1(BT070433|pid:none) Picea sitchensis clone WS02729_F15...   245   e-108
(Q56WD9) RecName: Full=3-ketoacyl-CoA thiolase 2, peroxisomal;  ...   248   e-108
T07989(T07989) acetyl-CoA C-acyltransferase (EC 2.3.1.16) precur...   247   e-108
AX025481_1(AX025481|pid:none) Sequence 7 from Patent WO0032789.       243   e-108

Homology AFO183 vs Genome