<List of Series> <Series: AFK5-D> <Clone: AFK594> <SEQ> <Translated> <CSM> <DNA> <Protein> <Genome> <PSORT> <MOTIF>

Dictyostelium discoideum cDNA Clone AFK594

Dictyostelium discoideum cDNA Project Home

Sequence AFK594

---------- CNNACTGATG ATGTTCATGC ATTAGTTAAT GGTAAAATTG
GTTTNAAATA TCATATCAAT AGATCCATTG AAGCAATTAC TCAAATTTCA
AAATCTCATG CAAAGAGATC ACTTCATATG TTCCAANAGG TAACCAAAGN
ATTTT

Translated Amino Acid Sequence AFK594

<All Frames> 
---TDDVHALVNGKIGXKYHINRSIEAITQISKSHAKRSLHMFQXVTKXF


Homology AFK594 vs CSM-cDNA

<more CSM info> 
Sequences producing significant alignments:                      (bits) Value


AFK594 (AFK594Q) /CSM/AF/AFK5-D/AFK594Q.Seq.d/                        264   3e-70
VSD281 (VSD281Q) /CSM/VS/VSD2-D/VSD281Q.Seq.d/                        256   8e-68
VSA514 (VSA514Q) /CSM/VS/VSA5-A/VSA514Q.Seq.d/                        256   8e-68
VFO795 (VFO795Q) /CSM/VF/VFO7-D/VFO795Q.Seq.d/                        256   8e-68
VFN509 (VFN509Q) /CSM/VF/VFN5-A/VFN509Q.Seq.d/                        256   8e-68
VFM634 (VFM634Q) /CSM/VF/VFM6-B/VFM634Q.Seq.d/                        256   8e-68
VFM381 (VFM381Q) /CSM/VF/VFM3-D/VFM381Q.Seq.d/                        256   8e-68
VFK702 (VFK702Q) /CSM/VF/VFK7-A/VFK702Q.Seq.d/                        256   8e-68
VFK202 (VFK202Q) /CSM/VF/VFK2-A/VFK202Q.Seq.d/                        256   8e-68
VFK121 (VFK121Q) /CSM/VF/VFK1-A/VFK121Q.Seq.d/                        256   8e-68


Homology AFK594 vs DNA

<more DNA info> 
Sequences producing significant alignments:                  (bits) Value  N


AC097071|AC097071.5 Rattus norvegicus clone CH230-19P2, *** ...    36   0.14   6
BE808486|BE808486.1 213626 MARC 2BOV Bos taurus cDNA 5', mRN...    46   0.15   1
CB418181|CB418181.1 590968 MARC 6BOV Bos taurus cDNA 5', mRN...    46   0.15   1
CE323615|CE323615.1 tigr-gss-dog-17000360284591 Dog Library ...    34   0.26   2
AP005516|AP005516.5 Oryza sativa (japonica cultivar-group) g...    44   0.59   1
AC130964|AC130964.3 Rattus norvegicus clone CH230-5C23, *** ...    36   1.4    5
BX294109|BX294109.5 Zebrafish DNA sequence from clone CH211-...    34   2.3    4
AI962824|AI962824.1 wq43e06.x1 NCI_CGAP_GC6 Homo sapiens cDN...    42   2.3    1
CG927146|CG927146.1 MBEJT45TFB mth2 Medicago truncatula geno...    42   2.3    1
CR485954|CR485954.1 Medicago truncatula BAC ends cultivar Je...    42   2.3    1


Homology AFK594 vs Protein

<more Protein info> 
Sequences producing significant alignments:                      (bits) Value


(Q54UB5) RecName: Full=26S proteasome non-ATPase regulatory subu...    87   2e-16
FN392321_1098(FN392321|pid:none) Pichia pastoris GS115 chromosom...    40   0.055
EU752646_1(EU752646|pid:none) Populus tremula isolate swl28-31 N...    36   0.79
EF146969_1(EF146969|pid:none) Populus trichocarpa clone WS01225_...    36   0.79
AM424416_1(AM424416|pid:none) Vitis vinifera contig VV78X196128....    36   0.79
FR824104_29(FR824104|pid:none) Albugo laibachii Nc14, genomic co...    35   1.0
AE013599_2169(AE013599|pid:none) Drosophila melanogaster chromos...    35   1.8
EU752639_1(EU752639|pid:none) Populus tremula isolate swl28-3 NA...    35   1.8
AY230837_1(AY230837|pid:none) Arabidopsis thaliana 26S proteasom...    33   3.9
EZ422378_1(EZ422378|pid:none) TSA: Glossina morsitans morsitans ...    33   3.9


Homology AFK594 vs Genome

<more Genome info> 





<List of Series> <Series: AFK5-D> <Clone: AFK594> <SEQ> <Translated> <CSM> <DNA> <Protein> <Genome> <PSORT> <MOTIF>





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