Dictyostelium discoideum cDNA Clone AFK438

Sequence AFK438

ATCGCCTCAC TTTTTATTTT TGTATTATAT TCTCTCTTTA TTTCTTTTCT
ATATATAGAT AAATTTTTTT TAGAAAAACT AAAAAAAAAA CCTCAAACAA
TTAATACAAA ATGGTAAACA TTGGTGGAAC TCAAGAAAAA TGTACTGCAT
GTGCTAAAAC TGTATACTTA ACAGAAAAGA TTGTAGTTGA AGATAAAGAA
GATAAGAAAA CTTTCCACAA ATTATGTTTA AAATGTACTC ACTGTAAGCT
TACATTAAGT CTTGGTAACT ATGCATCATT AAATGGNGTA TTCTATTGTA
AACCACATTT CAAACAATTA TTCGCCACCA AAGGTAACTA CGATGAAGGT
TTCGGTAAAT CAAAACATTC TGAAAAATGG ACACCACAAG CCACCCCAAC
TGGTACTTCT TCATTCATTC CAGTTGAAGA ATCAAAATCA TCAGAAAAGA
AAGAAACACC AACAACAATT TCATCAAAAT TCTCAGGATC AACTGAAAAA
TGTAATCTCT GTAATAAGAC AGTATATTTA ACAGAAAAGA TTGTTGTTGA
AGATAAAGAA GATAAGAAAG TNTTACATAA ACAATGTTTG AAATGTACAC
ATTGTAGTGT TGTATTAAAT CTTGGTACCT ATGCATCAAT GAAAGGNGTA
TTCTATTGTA AACCACATTT CAAACAATTA TTCGCCACCA AAGGTAACTA
TGATGAAAGN TTTGGTAACA ACAAAGNCCN CCGATAAATG GGCACCACAA
ACCAACCC-- --------GT NAACCAAAAC NCTNTGAAAA ATGGGAAAAT
NACCCANTNC CATATTTANA AAAGGANAGC NGTTATGNAC CNTCCGTTNN
AAAGGTTNAA TNTCAAATGA ATAATGCTTC ATNTGAATCN GATGNTGATA
GATTTAAAAA TNTTTCCNAT NATGATTTTG ATNAACCNAG AAGNCAACAA
CAACCAGTTT TTCAACCNGA AGAANAACAA CAACAACAAG AANAANAAAA
AGTTGA

Translated Amino Acid Sequence AFK438

iaslfifvlyslfisflyidkffleklkkkpqtintkw*tlvelkknvlhvlklyt*qkr
l*lkikkirklstnyv*nvltvslh*vlvtmhh*mxysivnhisnnysppkvttmkvsvn
qnilknghhkppqlvllhsfqlknqnhqkrkkhqqqfhqnsqdqlknvisvirqyi*qkr
lllkikkirkxyinnv*nvhivvly*ilvpmhq*KXYSIVNHISNNYSPPKVTMMKXLVT
TKXXDKWAPQTN---

---XPKXXEKWENXPXPYLXKXSXYXPSVXKVXXQMNNASXESDXDRFKNXSXXDFDXPR
XQQQPVFQPEEXQQQQEXXKV

Homology AFK438 vs CSM-cDNA

Sequences producing significant alignments:                      (bits) Value


AFK438 (AFK438Q) /CSM/AF/AFK4-B/AFK438Q.Seq.d/                       1562   0.0
AFN295 (AFN295Q) /CSM/AF/AFN2-D/AFN295Q.Seq.d/                       1273   0.0
AFG661 (AFG661Q) /CSM/AF/AFG6-C/AFG661Q.Seq.d/                       1269   0.0
AFG565 (AFG565Q) /CSM/AF/AFG5-C/AFG565Q.Seq.d/                       1269   0.0
SFD622 (SFD622Q) /CSM/SF/SFD6-A/SFD622Q.Seq.d/                       1267   0.0
CHO514 (CHO514Q) /CSM/CH/CHO5-A/CHO514Q.Seq.d/                       1267   0.0
AFL234 (AFL234Q) /CSM/AF/AFL2-B/AFL234Q.Seq.d/                       1267   0.0
SFE749 (SFE749Q) /CSM/SF/SFE7-C/SFE749Q.Seq.d/                       1265   0.0
AFF609 (AFF609Q) /CSM/AF/AFF6-A/AFF609Q.Seq.d/                       1265   0.0
SFF706 (SFF706Q) /CSM/SF/SFF7-A/SFF706Q.Seq.d/                       1263   0.0

Homology AFK438 vs DNA

Sequences producing significant alignments:                  (bits) Value  N


AC117081|AC117081.2 Dictyostelium discoideum chromosome 2 ma...    34   1e-04  12
AC115598|AC115598.2 Dictyostelium discoideum chromosome 2 ma...    44   5e-04  7
AC116960|AC116960.2 Dictyostelium discoideum chromosome 2 ma...    42   0.002  11
AC116957|AC116957.2 Dictyostelium discoideum chromosome 2 ma...    42   0.010  9
AC128255|AC128255.2 Rattus norvegicus clone CH230-42J13, ***...    34   0.011  8
BE858201|BE858201.1 7g19d02.x1 NCI_CGAP_Brn23 Homo sapiens c...    52   0.018  1
AL929351|AL929351.1 Plasmodium falciparum strain 3D7, chromo...    34   0.025  12
AC108625|AC108625.5 Rattus norvegicus clone CH230-64A14, WOR...    34   0.033  8
AC116032|AC116032.2 Dictyostelium discoideum chromosome 2 ma...    32   0.038  6
AC095264|AC095264.4 Rattus norvegicus clone CH230-9O3, *** S...    42   0.038  11

Homology AFK438 vs Protein

Sequences producing significant alignments:                      (bits) Value


AF184886_1(AF184886|pid:none) Nicotiana tabacum LIM domain prote...   116   2e-24
GQ901953_1(GQ901953|pid:none) Hevea brasiliensis LIM1 mRNA, comp...   115   5e-24
AC135208_4(AC135208|pid:none) Oryza sativa (japonica cultivar-gr...   114   6e-24
EF035040_1(EF035040|pid:none) Populus tremula x Populus alba LIM...   114   8e-24
EF146377_1(EF146377|pid:none) Populus trichocarpa clone WS0117_L...   114   8e-24
AM469183_1(AM469183|pid:none) Vitis vinifera contig VV78X221882....   114   8e-24
EU496813_1(EU496813|pid:none) Nicotiana tabacum LIM domain prote...   113   1e-23
AC004665_22(AC004665|pid:none) Arabidopsis thaliana chromosome 2...   113   2e-23
EF148212_1(EF148212|pid:none) Populus trichocarpa clone WS0128_M...   113   2e-23
AK317129_1(AK317129|pid:none) Arabidopsis thaliana AT3G55770 mRN...   111   7e-23

Homology AFK438 vs Genome