Dictyostelium discoideum cDNA Clone AFK245

Sequence AFK245

ATCTCTCCAA TCATCATATT TATAATTATA TCTTTTTTGT TTAATAAAAA
AGAAAGAATA CCAACATGAG ACTTTTATTG TGTTTAATTT TCTTAGTTTT
TGTTTTCAAT TTTGCATTAT CAACAGTTCA TTTCAAAGAT ACCTTTGATA
ACGATTGGGA ATCAAGATGG GTTGTTAGTG ATTGGCATAA AGAAGATGGT
AAATCAGGTA AATTAGTTCA TACTGCAGGT AAATGGTTTG GTGATGAAAA
TCAAAAAGGT ATTCAAACTA GTGAAGATGC TCGTTTCTAC GCTGTATCAG
CTAAATTCCC AAGTTTCAGT AACAAAGGTA AAGATTTAGT TCTCCAATAC
ACTGTAAAGA ATGAACAAAA AGTTGATTGT GGTGGTTCAT ACATCAAGTT
ATTACCATCC AAATTAGATC AATCAGCATT CGATGGTGAA TCTGAATATT
CCATTATGTT TGGTCCAGAT GTTTGTGGTG CCTCAAAGAG AGTTCACGTC
ATTCTCAACT ACAAAGGAAA GAACCATTTA ATCAAGAAAG AAATCAACAA
AGTTGAAACC GATCAATTAA CTCATCAATA CACTTTGGTC ATTTCACCAG
ATAACACCTA CAAAGTACTC GTCGATAACA AAGAGATCCA AGCAGGTAAC
CTCGCTGATG ATTGGGAATT ACTTCCATCA AAACAAATCA AAGATCCAAA
ACAATCCAAA CCAGTCGATT GGGTTGACGT AAAGGAAATC GATGACCCAG
AAGATGTTAA ACCAGCCGGT CATGACGATA TCCCAGCTTC AATCGTTGAT
CCAGAAGCTG CCAAACCAGA GGATTGGAAT GAAGAAGACG ACGGTGAATG
GGAAGCCCCA ACCATCGCCA ATCCAGAATA CAAAGGTGAA TGGAAAGCAA
AGAAAATCCC AAATCCAGAA TACAAAGGTG AATGGGTACA CCCATTAATT
GATAACCCAG AATACGCTGA AGACAATGAA CTCTACCTCT TTAATGATCT
CGGTGCTATC GGTTTCGAAT TATGGCAAGT TAAATCTGGT TCCATCTTTA
ACAATATGAT CGTCACCGAC TCTGTCGAAG AAGCTAAAGA TTTCTCTGAA
AAGACCTTTG TTGCCAACCA AGAAGCCGAA AAGAAAATGT TTGACGACCT
CGAAGCCGCC AAAGCTGAAG AGAGAAAGAA AGCTGACGAA AAATTAGCTG
CCGAAAAAGC TGCNAAAAAG AAGCCGAAGA AGCTATAAGA AGAAGAAGAA
GTCGCNAAGA AGATT

Translated Amino Acid Sequence AFK245

lsnhhiynyiffv**KRKNTNMRLLLCLIFLVFVFNFALSTVHFKDTFDNDWESRWVVSD
WHKEDGKSGKLVHTAGKWFGDENQKGIQTSEDARFYAVSAKFPSFSNKGKDLVLQYTVKN
EQKVDCGGSYIKLLPSKLDQSAFDGESEYSIMFGPDVCGASKRVHVILNYKGKNHLIKKE
INKVETDQLTHQYTLVISPDNTYKVLVDNKEIQAGNLADDWELLPSKQIKDPKQSKPVDW
VDVKEIDDPEDVKPAGHDDIPASIVDPEAAKPEDWNEEDDGEWEAPTIANPEYKGEWKAK
KIPNPEYKGEWVHPLIDNPEYAEDNELYLFNDLGAIGFELWQVKSGSIFNNMIVTDSVEE
AKDFSEKTFVANQEAEKKMFDDLEAAKAEERKKADEKLAAEKAAKKKPKKL*eeeevakk
i

Homology AFK245 vs CSM-cDNA

Sequences producing significant alignments:                      (bits) Value


AFK245 (AFK245Q) /CSM/AF/AFK2-B/AFK245Q.Seq.d/                       2125   0.0
AFN528 (AFN528Q) /CSM/AF/AFN5-B/AFN528Q.Seq.d/                       2117   0.0
AFK286 (AFK286Q) /CSM/AF/AFK2-D/AFK286Q.Seq.d/                       2117   0.0
AFE410 (AFE410Q) /CSM/AF/AFE4-A/AFE410Q.Seq.d/                       2117   0.0
AFE318 (AFE318Q) /CSM/AF/AFE3-A/AFE318Q.Seq.d/                       2117   0.0
AFE168 (AFE168Q) /CSM/AF/AFE1-C/AFE168Q.Seq.d/                       2117   0.0
AFD463 (AFD463Q) /CSM/AF/AFD4-C/AFD463Q.Seq.d/                       2117   0.0
AFJ570 (AFJ570Q) /CSM/AF/AFJ5-C/AFJ570Q.Seq.d/                       2111   0.0
AFA657 (AFA657Q) /CSM/AF/AFA6-C/AFA657Q.Seq.d/                       2111   0.0
AFG846 (AFG846Q) /CSM/AF/AFG8-B/AFG846Q.Seq.d/                       2109   0.0

Homology AFK245 vs DNA

Sequences producing significant alignments:                  (bits) Value  N


U36937|U36937.1 Dictyostelium discoideum calreticulin mRNA, ...  2109   0.0    2
BD248385|BD248385.1 Gene participating in tolerance against ...    92   8e-28  4
BH160872|BH160872.1 ENTRI18TR Entamoeba histolytica Sheared ...    80   2e-21  4
AZ543757|AZ543757.1 ENTGD24TR Entamoeba histolytica Sheared ...    80   1e-10  1
BI921109|BI921109.1 EST541012 tomato callus Lycopersicon esc...    74   2e-10  2
BT013428|BT013428.1 Lycopersicon esculentum clone 132068F, m...    74   4e-10  2
CK247437|CK247437.1 EST731074 potato callus cDNA library, no...    66   4e-09  3
CK253744|CK253744.1 EST737381 potato callus cDNA library, no...    66   5e-09  3
AW626316|AW626316.1 EST320223 tomato radicle, 5 d post-imbib...    74   6e-09  1
BE459798|BE459798.1 EST415090 tomato developing/immature gre...    74   6e-09  1

Homology AFK245 vs Protein

Sequences producing significant alignments:                      (bits) Value


U36937_1(U36937|pid:none) Dictyostelium discoideum calreticulin ...   684   0.0
AK318734_1(AK318734|pid:none) Arabidopsis thaliana AT1G56340 mRN...   421   e-116
CP002684_6164(CP002684|pid:none) Arabidopsis thaliana chromosome...   421   e-116
HC747438_1(HC747438|pid:none) Sequence 4529 from Patent WO201004...   418   e-115
HC747456_1(HC747456|pid:none) Sequence 4547 from Patent WO201004...   417   e-115
AC133339_28(AC133339|pid:none) Oryza sativa chromosome 3 BAC OSJ...   417   e-115
AB196794_1(AB196794|pid:none) Glycine max Gm crt-1 mRNA for calr...   416   e-114
(Q9XF98) RecName: Full=Calreticulin; Flags: Precursor;  &AF13473...   416   e-114
AF283816_1(AF283816|pid:none) Pinus taeda calreticulin mRNA, com...   416   e-114
EF085019_1(EF085019|pid:none) Picea sitchensis clone WS0297_I16 ...   416   e-114

Homology AFK245 vs Genome