Dictyostelium discoideum cDNA Clone AFK242

Sequence AFK242

CACTGTTGGC CTACTGGAAT TTCTCCAATG CATCATATTT ATAATTATAT
CTTTTTTGTT TAATAAAAAA GAAAGAATAC CAACATGAGA CTTTTATTGT
GTTTAATTTT CTTAGTTTTT GTTTTCAATT TTGCATTATC AACAGTTCAT
TTCAAAGATA CCTTTGATAA CGATTGGGAA TCAAGATGGG TTGTTAGTGA
TTGGCATAAA GAAGATGGTA AATCAGGTAA ATTAGTTCAT ACTGCAGGTA
AATGGTTTGG TGATGAAAAT CAAAAAGGTA TTCAAACTAG TGAAGATGCT
CGTTTCTACG CTGTATCAGC TAAATTCCCA AGTTTCAGTA ACAAAGGTAA
AGATTTAGTT CTCCAATACA CTGTAAAGAA TGAACAAAAA GTTGATTGTG
GTGGTTCATA CATCAAGTTA TTACCATCCA AATTAGATCA ATCAGCATTC
GATGGTGAAT CTGAATATTC CATTATGTTT GGTCCAGATG TTTGTGGTGC
CTCAAAGAGA GTTCACGTCA TTCTCAACTA CAAAGGAAAG AACCATTTAA
TCAAG----- -----CAAAT CAAAGATCCA AAACAATCCA AACCAGTCGA
TTGGGTTGAC GTAAAGGAAA TCGATGACCC AGAAGATGTT AAACCAGCCG
GTCATGACGA TATCCCAGCT TCAATCGTTG ATCCAGAAGC TGTCAAACCA
GAGGATTGGA ATGAAGAAGA CGACGGTGAA TGGGAAGCCC CAACCATCGC
CAATCCAGAA TACAAAGGTG AATGGAAAGC AAAGAAAATC CCAAATCCAG
AATACAAAGG TGAATGGGTA CNCCCATTAA TTGATAACCC AGAATACGCT
GAAGACAATG AACTCTACCT CTTTAATGAT CTCGGTGCTA TCGGTTTCGA
ATTATGGCAA GTTAAATCTG GTTCCATCTT TAACAATATG ATCGTCNCCG
ACTCTGTCGA AGAAGCTAAA GATTTCTNTG AAAAGACCTT TGTTGCCAAC
CAAGAAGCCG AAAAGAAAAT GTTTGACGAC CTCGAAGCCG CCAAAGCTGA
ANANANAAAG AAAGCTGACG AAAAATTAGC TGCCGAAAAA GCTGCTGAAA
AAGAAGCCGA AGAAGCTGAT GAAGAAGAAG AAGAAGTCGC TGAAGAAGAT
TTAGTTAAAA CTTAGNCAAA AAAGAAGAAG TCAAAAAATC AACCAAAAAA
GT

Translated Amino Acid Sequence AFK242

hcwptgispmhhiynyiffv**KRKNTNMRLLLCLIFLVFVFNFALSTVHFKDTFDNDWE
SRWVVSDWHKEDGKSGKLVHTAGKWFGDENQKGIQTSEDARFYAVSAKFPSFSNKGKDLV
LQYTVKNEQKVDCGGSYIKLLPSKLDQSAFDGESEYSIMFGPDVCGASKRVHVILNYKGK
NHLIK---

---QIKDPKQSKPVDWVDVKEIDDPEDVKPAGHDDIPASIVDPEAVKPEDWNEEDDGEWE
APTIANPEYKGEWKAKKIPNPEYKGEWVXPLIDNPEYAEDNELYLFNDLGAIGFELWQVK
SGSIFNNMIVXDSVEEAKDFXEKTFVANQEAEKKMFDDLEAAKAEXXKKADEKLAAEKAA
EKEAEEADEEEEEVAEEDLVKT*xkkkksknqpkk

Homology AFK242 vs CSM-cDNA

Sequences producing significant alignments:                      (bits) Value


AFK242 (AFK242Q) /CSM/AF/AFK2-B/AFK242Q.Seq.d/                       2006   0.0
AFK274 (AFK274Q) /CSM/AF/AFK2-D/AFK274Q.Seq.d/                       1098   0.0
VFL283 (VFL283Q) /CSM/VF/VFL2-D/VFL283Q.Seq.d/                       1084   0.0
VFL214 (VFL214Q) /CSM/VF/VFL2-A/VFL214Q.Seq.d/                       1084   0.0
AFI321 (AFI321Q) /CSM/AF/AFI3-A/AFI321Q.Seq.d/                       1084   0.0
AFH646 (AFH646Q) /CSM/AF/AFH6-B/AFH646Q.Seq.d/                       1070   0.0
VFE283 (VFE283Q) /CSM/VF/VFE2-D/VFE283Q.Seq.d/                       1055   0.0
SFH596 (SFH596Q) /CSM/SF/SFH5-D/SFH596Q.Seq.d/                       1053   0.0
VFN642 (VFN642Q) /CSM/VF/VFN6-B/VFN642Q.Seq.d/                       1051   0.0
VFM435 (VFM435Q) /CSM/VF/VFM4-B/VFM435Q.Seq.d/                       1051   0.0

Homology AFK242 vs DNA

Sequences producing significant alignments:                  (bits) Value  N


(U36937) Dictyostelium discoideum calreticulin mRNA, complet...   928   0.0    3
(BJ327651) Dictyostelium discoideum cDNA clone:dda21c12, 5' ...   837   0.0    2
(BJ327785) Dictyostelium discoideum cDNA clone:dda21c20, 5' ...   837   0.0    2
(BJ431077) Dictyostelium discoideum cDNA clone:ddv9e22, 3' e...   928   0.0    2
(AU061529) Dictyostelium discoideum slug cDNA, clone SLE570.      837   0.0    3
(BJ326592) Dictyostelium discoideum cDNA clone:dda17j05, 5' ...   837   0.0    3
(BJ415802) Dictyostelium discoideum cDNA clone:ddv23e22, 5' ...   837   0.0    3
(BJ415615) Dictyostelium discoideum cDNA clone:ddv23k04, 5' ...   837   0.0    3
(BJ345028) Dictyostelium discoideum cDNA clone:dda21i12, 3' ...   920   0.0    2
(BJ415746) Dictyostelium discoideum cDNA clone:ddv23h15, 5' ...   837   0.0    3

Homology AFK242 vs Protein

Sequences producing significant alignments:                      (bits) Value


U36937_1(U36937|pid:none) Dictyostelium discoideum calreticulin ...   297   9e-79
CP002684_1076(CP002684|pid:none) Arabidopsis thaliana chromosome...   142   1e-67
L24159_1(L24159|pid:none) Schistosoma mansoni calreticulin gene,...   145   2e-67
AC133339_28(AC133339|pid:none) Oryza sativa chromosome 3 BAC OSJ...   192   4e-47
FJ209028_1(FJ209028|pid:none) Lotharella amoeboformis calreticul...   191   5e-47
U66344_1(U66344|pid:none) Arabidopsis thaliana calreticulin (Crt...   189   2e-46
U27698_1(U27698|pid:none) Arabidopsis thaliana calreticulin (AtC...   189   2e-46
AK318734_1(AK318734|pid:none) Arabidopsis thaliana AT1G56340 mRN...   188   5e-46
HC747438_1(HC747438|pid:none) Sequence 4529 from Patent WO201004...   188   5e-46
(Q40401) RecName: Full=Calreticulin; Flags: Precursor;  &T16968(...   188   5e-46

Homology AFK242 vs Genome