Dictyostelium discoideum cDNA Clone AFK160

Sequence AFK160

TGACACTAAT ATAAATACCA TTAATGATAA CAACAACAAT AATAATAACA
ACAATAATAA TAACAATAAC TCTGTTAATA ATAATTTACT TAGTATGTGT
CAAGACCCAA CTTTAATCTT ACAAATACAA CAATTATTAT TACAACAACA
ATTGTTACAA CAAGCTCAAC AACAATCTGT ACCATTAAAT ATTCAAGTAC
CTACAACCAC AACACCAATT AATCAACAAC ATCAAGCTTT ATTGGTTCCA
CAACAAAAAC AATTTTATGG TAATGTCTCT GATAATTCAT CACCAGAAAC
CAATTTTTCA TATGCAAGTC CATCTTCACC AAGTTCTACA CAACCACAAT
CCTCACCATA TGAACAACAA CCACTCTCAC CAAATCCAAC TATATCTTTA
TCATCTAGTA TCTCTGTCAC TGCTACTACT ACCACTAGAC CAAATGCCAC
AGAAAAGACT AAAGAATCTT CCTTAAAATC AAAATCTAAA TCTAATGAAA
AAGATAAAGA AAGGGAAGAT GAAGAAGAAG ATGATGATGA TAGACCAAAG
AAAAGAAAGA AATTTGATAA AAATGTTTAT AAGGGTGTTG ATTTAGGTGA
TGAACTATTA GAAATCACTA GTGAAGAATT TCAAGCTTAT AAAAATAATT
TCTTTGCAAA TGCCAGTGAC AAGAAAACTG TTAGTGCTTT AAATTATCAA
TTTAGAAAAA TTAAAAATAG AGAAAGTGCT AGAAGATCAA GAGAAAGAAA
AGCAACACAT GTTGATGAAT TAGAGGCAAA GATTGCAGAA ATTGAAAAAG
AAAGAGATAA TTATAAAAAA GAGAATGAAA GATTAAGAAT GGAATTGGAT
CAATATAAAT TACAAGAAAA ACAAAAATCA GCTGGTAGTA CCTTTGATTA
TATTTCAATT GGTTCACCAA CTACTCAAAA CTTTAGTAAA AACTTTGGTA
TCATTCTTTT CCTCTTTTTG TTTGGTTCTT TT-------- --ACTGCCTC
ACAAGGTGTA TTTAGTACTC ATTTTGTACC AGAACAACCA AGTATTTTAT
TAAATAGAGA ATCAATTAGA AATTGGGCCA CTTTACCACA AAATAGTGTT
GCCTCTCTTT CTTTTGAAAA AGATAACGCT CTCAAAACAA TTGAAAATGC
AAATCTTGAT AAATCAAAAC ATAATGTCAT TTCAAATTTA AATCAACTTC
AACAACAACA ACCATCATCT GATGAATTAA TGATTGACCA AAAAGAAGAA
AAGAATTGCA ATAATAATAA TGAAAATAAT AATAATAATG ACAATAATAA
AAATAGTGAT GATGAAAAAG GTAAAGAAAT TGAAGAAATT AAAAGAAAAT
CAACAACAAC AACCATTTCA CCAACTCGTT ATGTAAATAA TTCAACTATT
AGTTTATTAG TTAATCCAAC ATCGGTAATT GGTGATATAC CAGATGATTT
GATGAAAAAT TCAAATGTTA CTACTTTTGG TGAAAACTCT TCTTTCAAGT
TTAATTTCTT GATTGACACT CAAAATTTCC CAAATGGTTC TAATGATATT
TCAAAAGCAT TCTTTGATAA TGAAAATCAA CAAATGACTG TCACCTCTGT
TATTATTGCA ATTCAAAAAT CACCTAAAAC TCCTTCTCAG CAACCATCAA
CCAAANATTT TTTTTAAAAA AATATTTTTT ATTTTCNATC AATTTTTC

Translated Amino Acid Sequence AFK160

DTNINTINDNNNNNNNNNNNNNNSVNNNLLSMCQDPTLILQIQQLLLQQQLLQQAQQQSV
PLNIQVPTTTTPINQQHQALLVPQQKQFYGNVSDNSSPETNFSYASPSSPSSTQPQSSPY
EQQPLSPNPTISLSSSISVTATTTTRPNATEKTKESSLKSKSKSNEKDKEREDEEEDDDD
RPKKRKKFDKNVYKGVDLGDELLEITSEEFQAYKNNFFANASDKKTVSALNYQFRKIKNR
ESARRSRERKATHVDELEAKIAEIEKERDNYKKENERLRMELDQYKLQEKQKSAGSTFDY
ISIGSPTTQNFSKNFGIILFLFLFGSF---

---TASQGVFSTHFVPEQPSILLNRESIRNWATLPQNSVASLSFEKDNALKTIENANLDK
SKHNVISNLNQLQQQQPSSDELMIDQKEEKNCNNNNENNNNNDNNKNSDDEKGKEIEEIK
RKSTTTTISPTRYVNNSTISLLVNPTSVIGDIPDDLMKNSNVTTFGENSSFKFNFLIDTQ
NFPNGSNDISKAFFDNENQQMTVTSVIIAIQKSPKTPSQQPSTKXFF*knifyfxsif

Homology AFK160 vs CSM-cDNA

Sequences producing significant alignments:                      (bits) Value


AFK160 (AFK160Q) /CSM/AF/AFK1-C/AFK160Q.Seq.d/                        785   0.0
SSL649 (SSL649Q) /CSM/SS/SSL6-C/SSL649Q.Seq.d/                        617   e-175
VFO825 (VFO825Q) /CSM/VF/VFO8-B/VFO825Q.Seq.d/                        611   e-173
CHF875 (CHF875Q) /CSM/CH/CHF8-D/CHF875Q.Seq.d/                        535   e-151
VHI629 (VHI629Q) /CSM/VH/VHI6-B/VHI629Q.Seq.d/                        490   e-137
SFH101 (SFH101Q) /CSM/SF/SFH1-A/SFH101Q.Seq.d/                        440   e-122
VHL606 (VHL606Q) /CSM/VH/VHL6-A/VHL606Q.Seq.d/                         44   0.007
SLC858 (SLC858Q) /CSM/SL/SLC8-C/SLC858Q.Seq.d/                         44   0.007
SSJ565 (SSJ565Q) /CSM/SS/SSJ5-C/SSJ565Q.Seq.d/                         42   0.028
VSK291 (VSK291Q) /CSM/VS/VSK2-D/VSK291Q.Seq.d/                         40   0.11

Homology AFK160 vs DNA

Sequences producing significant alignments:                  (bits) Value  N


AC116305|AC116305.2 Dictyostelium discoideum chromosome 2 ma...    34   9e-10  22
AC117080|AC117080.2 Dictyostelium discoideum chromosome 2 ma...    44   2e-09  16
AC116963|AC116963.2 Dictyostelium discoideum chromosome 2 ma...    38   1e-08  18
AC117075|AC117075.2 Dictyostelium discoideum chromosome 2 ma...    38   3e-08  23
AC116986|AC116986.2 Dictyostelium discoideum chromosome 2 ma...    36   3e-08  18
AC117076|AC117076.3 Dictyostelium discoideum chromosome 2 ma...    36   9e-08  18
AC116984|AC116984.2 Dictyostelium discoideum chromosome 2 ma...    40   1e-07  20
AC117176|AC117176.2 Dictyostelium discoideum chromosome 2 ma...    32   1e-07  20
AC117070|AC117070.2 Dictyostelium discoideum chromosome 2 ma...    36   2e-07  16
AC116960|AC116960.2 Dictyostelium discoideum chromosome 2 ma...    38   2e-07  18

Homology AFK160 vs Protein

Sequences producing significant alignments:                      (bits) Value


(Q54WU0) RecName: Full=Probable basic-leucine zipper transcripti...   330   1e-88
CR533423_1(CR533423|pid:none) Paramecium tetraurelia, complete g...    36   6.0

Homology AFK160 vs Genome