Dictyostelium discoideum cDNA Clone AFI574

Sequence AFI574

ATTTCTCCAA TCATCATATT TATAATTATA TCTTTTTTGT TTAATAAAAA
AGAAAGAATA CCAACATGAG ACTTTTATTG TGTTTAATTT TCTTAGTTTT
TGTTTTCAAT TTTGCATTAT CAACAGTTCA TTTCAAAGAT ACCTTTGATA
ACGATTGGGA ATCAAGATGG GTTGTTAGTG ATTGGCATAA AGAAGATGGT
AAATCAGGTA AATTAGTTCA TACTGCAGGT AAATGGTTTG GTGATGAAAA
TCAAAAAGGT ATTCAAACTA GTGAAGATGC TCGTTTCTAC GCTGTATCAG
CTAAATTCCC AAGTTTCAGT AACAAAGGTA AAGATTTAGT TCTCCAATAC
ACTGTAAAGA ATGAACAAAA AGTTGATTGT GGTGGTTCAT ACATCAAGTT
ATTACCATCC AAATTAGATC AATCAGCATT CGATGGTGAA TCTGAATATT
CCATTATGTT TGGTCCAGAT GTTTGTGGTG CCTCAAAGAG AGTTCACGTC
ATTCTCAACT ACAAAGGAAA GAACCATTTA ATCAAGAAAG AAATCAACAA
AGTTGAAACC GATCAATTAA CTCATCAATA CACT------ ----ATTTCA
CCAGATAACA CCTACAAAGT ACTCGTCGAT AACAAAGAGA TCCAAGCAGG
TAACCTCGCT GATGATTGGG AATTACTTCC ATCAAAACAA ATCAAAGATC
CAAAACAATC CAAACCAGTC GATTGGGTTG ACGTAAAGGA AATCGATGAC
CCAGAAGATG TTAAACCAGC CGGTCATGAC GATATCCCAG CTTCAATCGT
TGATCCAGAA GCTGTCAAAC CAGAGGATTG GAATGAAGAA GACGACGGTG
AATGGGAAGC CCCAACCATC GCCAATCCAG AATACAAAGG TGAATGGAAA
GCAAAGAAAA TCCCAAATCC AGAATACAAA GGTGAATGGG TACACCCATT
AATTGATAAC CCAGAATACG CTGAAGACAA TGAACTCTAC CTCTTTAATG
ATCTCGGTGC TATCGGTTTC GAATTATGGC AAGTTAAATC TGGTTCCATC
TTTAACAATA TGATCGTCAC CGACTCTGTC GAAGAAGCTA AAGATTTCTC
TGAAAAGACC TTTGTTGCCA ACCAAGAAGC CGAAAAGAAA ATGTTTGACG
ACCTCGAAGC CGCCAAAGCT GAAGAGAGAA AGAAAGCTGA CGAAAAATTA
GCTGCCGAAA AAGCTGCTGA AAAAGAAGCC GAAGAAGCTG ATGAAGAAGA
AGAAGAAGTC GCTGAAGAAG ATTTAGTTAA AACTGATGAC AAAAAAGAAG
AAGTCAAAAA ATCAACCAAA AAAGTNATCA GACGAACTTT AAANAAATAA
ATAAA

Translated Amino Acid Sequence AFI574

fsnhhiynyiffv**KRKNTNMRLLLCLIFLVFVFNFALSTVHFKDTFDNDWESRWVVSD
WHKEDGKSGKLVHTAGKWFGDENQKGIQTSEDARFYAVSAKFPSFSNKGKDLVLQYTVKN
EQKVDCGGSYIKLLPSKLDQSAFDGESEYSIMFGPDVCGASKRVHVILNYKGKNHLIKKE
INKVETDQLTHQYT---

---ISPDNTYKVLVDNKEIQAGNLADDWELLPSKQIKDPKQSKPVDWVDVKEIDDPEDVK
PAGHDDIPASIVDPEAVKPEDWNEEDDGEWEAPTIANPEYKGEWKAKKIPNPEYKGEWVH
PLIDNPEYAEDNELYLFNDLGAIGFELWQVKSGSIFNNMIVTDSVEEAKDFSEKTFVANQ
EAEKKMFDDLEAAKAEERKKADEKLAAEKAAEKEAEEADEEEEEVAEEDLVKTDDKKEEV
KKSTKKVIRRTLXK*i

Homology AFI574 vs CSM-cDNA

Sequences producing significant alignments:                      (bits) Value


AFI574 (AFI574Q) /CSM/AF/AFI5-D/AFI574Q.Seq.d/                       2127   0.0
AFN528 (AFN528Q) /CSM/AF/AFN5-B/AFN528Q.Seq.d/                       2117   0.0
AFK286 (AFK286Q) /CSM/AF/AFK2-D/AFK286Q.Seq.d/                       2117   0.0
AFG656 (AFG656Q) /CSM/AF/AFG6-C/AFG656Q.Seq.d/                       2117   0.0
AFE410 (AFE410Q) /CSM/AF/AFE4-A/AFE410Q.Seq.d/                       2117   0.0
AFE318 (AFE318Q) /CSM/AF/AFE3-A/AFE318Q.Seq.d/                       2117   0.0
AFE168 (AFE168Q) /CSM/AF/AFE1-C/AFE168Q.Seq.d/                       2117   0.0
AFD463 (AFD463Q) /CSM/AF/AFD4-C/AFD463Q.Seq.d/                       2117   0.0
AFO773 (AFO773Q) /CSM/AF/AFO7-D/AFO773Q.Seq.d/                       2095   0.0
AFO794 (AFO794Q) /CSM/AF/AFO7-D/AFO794Q.Seq.d/                       2091   0.0

Homology AFI574 vs DNA

Sequences producing significant alignments:                  (bits) Value  N


U36937|U36937.1 Dictyostelium discoideum calreticulin mRNA, ...  1225   0.0    3
BD248385|BD248385.1 Gene participating in tolerance against ...    92   1e-27  4
BH160872|BH160872.1 ENTRI18TR Entamoeba histolytica Sheared ...    80   3e-21  4
AZ543757|AZ543757.1 ENTGD24TR Entamoeba histolytica Sheared ...    80   1e-10  1
BI921109|BI921109.1 EST541012 tomato callus Lycopersicon esc...    74   2e-10  2
BT013428|BT013428.1 Lycopersicon esculentum clone 132068F, m...    74   5e-10  2
CK247437|CK247437.1 EST731074 potato callus cDNA library, no...    66   5e-09  3
CK253744|CK253744.1 EST737381 potato callus cDNA library, no...    66   6e-09  3
BE459798|BE459798.1 EST415090 tomato developing/immature gre...    74   7e-09  1
AI771812|AI771812.1 EST252912 tomato ovary, TAMU Lycopersico...    74   7e-09  1

Homology AFI574 vs Protein

Sequences producing significant alignments:                      (bits) Value


U36937_1(U36937|pid:none) Dictyostelium discoideum calreticulin ...   353   0.0
CP002684_6164(CP002684|pid:none) Arabidopsis thaliana chromosome...   214   e-109
AK318734_1(AK318734|pid:none) Arabidopsis thaliana AT1G56340 mRN...   214   e-109
HC747438_1(HC747438|pid:none) Sequence 4529 from Patent WO201004...   211   e-108
AB196794_1(AB196794|pid:none) Glycine max Gm crt-1 mRNA for calr...   213   e-108
HC747456_1(HC747456|pid:none) Sequence 4547 from Patent WO201004...   211   e-108
(Q9XF98) RecName: Full=Calreticulin; Flags: Precursor;  &AF13473...   218   e-108
(Q40401) RecName: Full=Calreticulin; Flags: Precursor;  &T16968(...   210   e-108
EF085019_1(EF085019|pid:none) Picea sitchensis clone WS0297_I16 ...   211   e-107
AC133339_28(AC133339|pid:none) Oryza sativa chromosome 3 BAC OSJ...   208   e-107

Homology AFI574 vs Genome