Homology AFH830 vs Protein
Query= AFH830 (AFH830Q) /CSM/AF/AFH8-B/AFH830Q.Seq.d/
(1282 letters)
Database: nrp_B
5,349,213 sequences; 1,732,582,204 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY648777_1(AY648777|pid:none) Danio rerio clatherin heavy chain ... 281 4e-74
BC163714_1(BC163714|pid:none) Danio rerio clathrin, heavy polype... 281 4e-74
BC084145_1(BC084145|pid:none) Xenopus tropicalis hypothetical LO... 278 5e-73
(Q00610) RecName: Full=Clathrin heavy chain 1; AltName: Full=Cla... 278 5e-73
AK143503_1(AK143503|pid:none) Mus musculus 8 cells embryo 8 cell... 278 5e-73
AL592222_6(AL592222|pid:none) Mouse DNA sequence from clone RP23... 278 5e-73
(P11442) RecName: Full=Clathrin heavy chain 1; &J03583_1(J03583... 278 5e-73
BX640615_1(BX640615|pid:none) Homo sapiens mRNA; cDNA DKFZp686F1... 278 5e-73
D21260_1(D21260|pid:none) Homo sapiens KIAA0034 mRNA, partial cds. 278 5e-73
JN703960_1(JN703960|pid:none) Mesocricetus auratus clathrin heav... 278 5e-73
U60802_1(U60802|pid:none) Human clathrin heavy chain 2 (CLTCL) m... 271 6e-71
BC166681_1(BC166681|pid:none) Synthetic construct Homo sapiens c... 271 6e-71
U41763_1(U41763|pid:none) Human muscle specific clathrin heavy c... 271 6e-71
AK302506_1(AK302506|pid:none) Homo sapiens cDNA FLJ60971 complet... 271 6e-71
(P53675) RecName: Full=Clathrin heavy chain 2; AltName: Full=Cla... 271 6e-71
G02757(G02757) clathrin heavy chain 2 - human &U60803_1(U60803|... 271 6e-71
AJ429076_1(AJ429076|pid:none) Gallus gallus partial chc gene for... 270 1e-70
EU020945_1(EU020945|pid:none) Speleonectes tulumensis clone Stu5... 268 6e-70
GQ887260_1(GQ887260|pid:none) Nicoletia meinerti isolate 3_6 vou... 267 1e-69
GQ887253_1(GQ887253|pid:none) Leiobunum verrucosum isolate 3_6 v... 266 2e-69
GQ887247_1(GQ887247|pid:none) Heterometrus spinifer isolate 3_6 ... 266 2e-69
GQ887258_1(GQ887258|pid:none) Milnesium tardigradum isolate 3_6 ... 264 7e-69
EU020941_1(EU020941|pid:none) Narceus americanus clone Nam58f3 p... 264 9e-69
GQ887222_1(GQ887222|pid:none) Aphonopelma chalcodes isolate 3_6 ... 263 2e-68
GQ887266_1(GQ887266|pid:none) Prokoenenia wheeleri isolate 3_6 v... 262 3e-68
EU020937_1(EU020937|pid:none) Lithobius forticatus clone Lfo58f3... 262 4e-68
GQ887267_1(GQ887267|pid:none) Scutigera coleoptrata isolate 3_6 ... 261 5e-68
GQ887263_1(GQ887263|pid:none) Phrynus marginemaculatus isolate 3... 261 5e-68
EU020946_1(EU020946|pid:none) Thulinius stephaniae clone Thul58f... 261 8e-68
GQ887223_1(GQ887223|pid:none) Acheta domesticus isolate 3_6 vouc... 261 8e-68
GQ887232_1(GQ887232|pid:none) Cryptocellus centralis isolate 3_6... 261 8e-68
GQ887241_1(GQ887241|pid:none) Endeis laevis isolate 3_6 voucher ... 261 8e-68
GQ887265_1(GQ887265|pid:none) Pedetontus saltator isolate 3_6 vo... 260 1e-67
GQ887227_1(GQ887227|pid:none) Amblyomma sp. 'Amb2' isolate 3_6 v... 260 1e-67
GQ887252_1(GQ887252|pid:none) Plathemis lydia isolate 3_6 vouche... 260 1e-67
GQ887261_1(GQ887261|pid:none) Periplaneta americana isolate 3_6 ... 259 2e-67
GQ887224_1(GQ887224|pid:none) Achelia echinata isolate 3_6 vouch... 259 2e-67
GQ887239_1(GQ887239|pid:none) Eremocosta gigasella isolate 3_6 v... 259 2e-67
GQ887264_1(GQ887264|pid:none) Polyxenus fasciculatus isolate 3_6... 259 2e-67
EU020944_1(EU020944|pid:none) Podura aquatica clone Paq58f3 puta... 259 2e-67
GQ887270_1(GQ887270|pid:none) Scolopendra polymorpha isolate 3_6... 258 4e-67
JI164067_1(JI164067|pid:none) TSA: Ascaris suum ASCF_199_6513 mR... 258 4e-67
GQ887244_1(GQ887244|pid:none) Hanseniella sp. 'Han2' isolate 3_6... 258 4e-67
GQ887238_1(GQ887238|pid:none) Eumesocampa frigilis isolate 3_6 v... 258 5e-67
GQ887272_1(GQ887272|pid:none) Tomocerus sp. 'Tom2' isolate 3_6 v... 258 7e-67
GQ887240_1(GQ887240|pid:none) Ephemerella inconstans isolate 3_6... 258 7e-67
GQ887248_1(GQ887248|pid:none) Ischnura verticalis isolate 3_6 vo... 257 9e-67
GQ887254_1(GQ887254|pid:none) Loxothylacus texanus isolate 3_6 v... 257 9e-67
GQ887229_1(GQ887229|pid:none) Semibalanus balanoides isolate 3_6... 257 9e-67
GQ887268_1(GQ887268|pid:none) Scutigerella sp. 'Scu3' isolate 3_... 256 1e-66
GQ887255_1(GQ887255|pid:none) Lynceus sp. 'Lyn' isolate 3_6 vouc... 256 2e-66
GQ887221_1(GQ887221|pid:none) Armillifer armillatus isolate 3_6 ... 256 3e-66
EU020938_1(EU020938|pid:none) Limulus polyphemus clone Lpo58f3 p... 256 3e-66
GQ887256_1(GQ887256|pid:none) Hexagenia limbata isolate 3_6 vouc... 256 3e-66
GQ887236_1(GQ887236|pid:none) Derocheilocaris typicus isolate 3_... 255 3e-66
GQ887237_1(GQ887237|pid:none) Eurytemora affinis isolate 3_6 vou... 255 3e-66
GQ887243_1(GQ887243|pid:none) Eurypauropus spinosus isolate 3_6 ... 255 3e-66
EU020951_1(EU020951|pid:none) Prodoxus quinquepunctellus clone P... 255 4e-66
EU020949_1(EU020949|pid:none) Antheraea paukstadtorum clone Apau... 255 4e-66
EU020942_1(EU020942|pid:none) Nebalia hessleri clone Nhe58f3 put... 254 7e-66
PDBN(1B89)A MOL_ID: 1;MOL_ID: 1; MOLECULE: CLATHRIN HEAVY CHAIN;... 253 2e-65
EU020950_1(EU020950|pid:none) Cydia pomonella clone Cpo58f3 puta... 253 2e-65
GQ887259_1(GQ887259|pid:none) Neogonodactylus oerstedii isolate ... 252 3e-65
EU020943_1(EU020943|pid:none) Cypridopsis vidua clone Ost58f3 pu... 252 4e-65
(P29742) RecName: Full=Clathrin heavy chain; &AE014298_2497(AE0... 251 5e-65
GQ887250_1(GQ887250|pid:none) Libinia emarginata isolate 3_6 vou... 251 8e-65
EU020936_1(EU020936|pid:none) Forficula auricularia clone Fau58f... 250 1e-64
GQ887273_1(GQ887273|pid:none) Streptocephalus seali isolate 3_6 ... 250 1e-64
AK230290_1(AK230290|pid:none) Arabidopsis thaliana mRNA for hypo... 235 4e-60
AC074395_7(AC074395|pid:none) Arabidopsis thaliana chromosome 3 ... 235 4e-60
AC009991_6(AC009991|pid:none) Arabidopsis thaliana chromosome II... 232 3e-59
(Q10161) RecName: Full=Probable clathrin heavy chain; &CU329670... 228 4e-58
AC144729_2(AC144729|pid:none) Medicago truncatula clone mth2-15j... 228 7e-58
AM423296_2(AM423296|pid:none) Vitis vinifera contig VV78X272111.... 227 1e-57
CP001324_440(CP001324|pid:none) Micromonas sp. RCC299 chromosome... 226 2e-57
T06779(T06779) clathrin heavy chain - soybean &U42608_1(U42608|... 226 2e-57
CP000295_18(CP000295|pid:none) Cryptococcus gattii WM276 chromos... 226 2e-57
AE017350_310(AE017350|pid:none) Cryptococcus neoformans var. neo... 225 5e-57
AM270071_28(AM270071|pid:none) Aspergillus niger contig An04c010... 225 5e-57
AC142498_12(AC142498|pid:none) Medicago truncatula clone mth2-24... 222 3e-56
FR824066_41(FR824066|pid:none) Albugo laibachii Nc14, genomic co... 221 9e-56
FN393070_54(FN393070|pid:none) Saccharomyces cerevisiae EC1118 c... 216 2e-54
FN392319_1340(FN392319|pid:none) Pichia pastoris GS115 chromosom... 213 2e-53
CP003002_750(CP003002|pid:none) Myceliophthora thermophila ATCC ... 212 3e-53
CR382127_512(CR382127|pid:none) Yarrowia lipolytica strain CLIB1... 212 4e-53
FQ857236_35(FQ857236|pid:none) Piriformospora indica PIRI_contig... 211 7e-53
DQ219844_1(DQ219844|pid:none) Tetrahymena thermophila Chc1p (CHC... 209 2e-52
CP002497_199(CP002497|pid:none) Eremothecium cymbalariae DBVPG#7... 209 4e-52
CR380947_153(CR380947|pid:none) Candida glabrata strain CBS138 c... 208 5e-52
FP929064_156(FP929064|pid:none) Leptosphaeria maculans JN3 lm_Su... 207 8e-52
HE605202_218(HE605202|pid:none) Candida parapsilosis strain CDC3... 205 5e-51
AB261052_1(AB261052|pid:none) Entamoeba histolytica gene for Cla... 205 5e-51
AC012562_1(AC012562|pid:none) Arabidopsis thaliana chromosome 3 ... 204 1e-50
FR823385_460(FR823385|pid:none) Neospora caninum Liverpool compl... 203 2e-50
CR954201_183(CR954201|pid:none) Ostreococcus tauri strain OTTH05... 203 2e-50
HE612859_322(HE612859|pid:none) Tetrapisispora phaffii CBS 4417 ... 202 4e-50
CP000499_175(CP000499|pid:none) Scheffersomyces stipitis CBS 605... 201 6e-50
AE016818_712(AE016818|pid:none) Ashbya gossypii ATCC 10895 chrom... 201 1e-49
CR382126_429(CR382126|pid:none) Kluyveromyces lactis strain NRRL... 200 2e-49
HE580268_588(HE580268|pid:none) Naumovozyma dairenensis CBS 421 ... 199 2e-49
CR382137_206(CR382137|pid:none) Debaryomyces hansenii strain CBS... 191 6e-47
BC031408_1(BC031408|pid:none) Mus musculus clathrin, heavy polyp... 184 7e-45
AM910996_359(AM910996|pid:none) Plasmodium knowlesi strain H chr... 184 1e-44
AY815145_1(AY815145|pid:none) Schistosoma japonicum SJCHGC02697 ... 181 8e-44
AB170687_1(AB170687|pid:none) Macaca fascicularis brain cDNA clo... 161 9e-38
AK167527_1(AK167527|pid:none) Mus musculus 14 days pregnant adul... 160 1e-37
HE573026_602(HE573026|pid:none) Trypanosoma vivax Y486 annotated... 160 2e-37
AJ278858_1(AJ278858|pid:none) Trypanosoma brucei CHC gene for cl... 159 2e-37
EU753863_1(EU753863|pid:none) Carukia barnesi clone Cb-BJA-4 cla... 159 2e-37
AL592222_7(AL592222|pid:none) Mouse DNA sequence from clone RP23... 159 2e-37
HE575323_505(HE575323|pid:none) Trypanosoma congolense IL3000 an... 159 4e-37
AM494972_178(AM494972|pid:none) Leishmania braziliensis chromoso... 158 7e-37
AM502254_415(AM502254|pid:none) Leishmania infantum chromosome 3... 155 5e-36
AK229949_1(AK229949|pid:none) Arabidopsis thaliana mRNA for hypo... 154 1e-35
JN404573_1(JN404573|pid:none) Capsella rubella isolate Cr1209_26... 135 5e-30
JN404576_1(JN404576|pid:none) Capsella rubella isolate Cr39_1_TS... 135 5e-30
JN404575_1(JN404575|pid:none) Capsella rubella isolate Cr1GR1_TS... 135 7e-30
GU948579_1(GU948579|pid:none) Capsella grandiflora clone Cg918_1... 135 7e-30
AB171700_1(AB171700|pid:none) Macaca fascicularis brain cDNA clo... 100 2e-19
X95487_1(X95487|pid:none) H.sapiens mRNA for clathrin heavy chain. 91 1e-16
AY125725_1(AY125725|pid:none) Giardia intestinalis putative clat... 90 2e-16
EU753863_2(EU753863|pid:none) Carukia barnesi clone Cb-BJA-4 cla... 64 2e-08
FN357489_16(FN357489|pid:none) Schistosoma mansoni genome sequen... 43 0.044
CP002498_82(CP002498|pid:none) Eremothecium cymbalariae DBVPG#72... 40 0.22
AK291555_1(AK291555|pid:none) Homo sapiens cDNA FLJ76863 complet... 39 0.84
BC039299_1(BC039299|pid:none) Homo sapiens stress-induced-phosph... 38 1.1
(P31948) RecName: Full=Stress-induced-phosphoprotein 1; ... 38 1.1
FN392320_551(FN392320|pid:none) Pichia pastoris GS115 chromosome... 38 1.1
CP001619_3991(CP001619|pid:none) Dyadobacter fermentans DSM 1805... 38 1.1
AK305149_1(AK305149|pid:none) Pan troglodytes mRNA for stress-in... 38 1.4
(Q3ZBZ8) RecName: Full=Stress-induced-phosphoprotein 1; ... 37 1.9
AB170903_1(AB170903|pid:none) Macaca fascicularis brain cDNA clo... 37 2.4
AP009179_1735(AP009179|pid:none) Sulfurovum sp. NBC37-1 genomic ... 37 2.4
(Q4R8N7) RecName: Full=Stress-induced-phosphoprotein 1; ... 37 2.4
(Q60864) RecName: Full=Stress-induced-phosphoprotein 1; ... 36 4.2
BC003794_1(BC003794|pid:none) Mus musculus stress-induced phosph... 36 4.2
AB170269_1(AB170269|pid:none) Macaca fascicularis brain cDNA clo... 36 4.2
BC036908_1(BC036908|pid:none) Homo sapiens chromosome 2 open rea... 36 4.2
AB263748_53(AB263748|pid:none) Ipomoea trifida DNA, self-incompa... 36 4.2
BC029502_1(BC029502|pid:none) Homo sapiens chromosome 2 open rea... 36 4.2
AK168181_1(AK168181|pid:none) Mus musculus CRL-1722 L5178Y-R cDN... 36 5.4
(O35814) RecName: Full=Stress-induced-phosphoprotein 1; ... 36 5.4
(O54981) RecName: Full=Stress-induced-phosphoprotein 1; ... 36 5.4
AM910995_151(AM910995|pid:none) Plasmodium knowlesi strain H chr... 35 7.1
AE015928_1678(AE015928|pid:none) Bacteroides thetaiotaomicron VP... 35 9.3
CP001834_823(CP001834|pid:none) Lactococcus lactis subsp. lactis... 35 9.3
EU136723_1(EU136723|pid:none) Streptococcus pneumoniae strain R3... 35 9.3
>AY648777_1(AY648777|pid:none) Danio rerio clatherin heavy chain mRNA,
complete cds.
Length = 1680
Score = 281 bits (720), Expect = 4e-74
Identities = 134/208 (64%), Positives = 170/208 (81%)
Frame = +3
Query: 18 LITHIGSIERAHDFAERCNQTEVYSKLGVAQLKAEMVKECIESFIKANDTEHYQEVVAAA 197
LI HIG+++RA++FAERCN+ V+S+L AQL+ +VKE I+S+IKA+D Y EVV AA
Sbjct: 1085 LIEHIGNLDRAYEFAERCNEPAVWSQLAKAQLQKGLVKESIDSYIKADDPSAYMEVVQAA 1144
Query: 198 ERKDEYEDLVKFLQMCRKKIKEPAIESELIFAYAKVNKLAEMEDFINSPNSAHIQVVGDR 377
++ +EDLVKFLQM RKK +E +E+ELIFA AK N+LAE+E+FIN PN+AHIQ VGDR
Sbjct: 1145 DQSGNWEDLVKFLQMARKKARESYVETELIFALAKTNRLAELEEFINGPNNAHIQQVGDR 1204
Query: 378 CFENGLYEAAKVLYTNISNFSRLTSCLVKLGQYQAAVDAARKANSTKTWKEVSAACIDAK 557
C++ +YEAAK+LY N+SNF RL S LV LG+YQAAVD ARKANST+TWKEV AC+D K
Sbjct: 1205 CYDEKMYEAAKLLYNNVSNFGRLASTLVHLGEYQAAVDGARKANSTRTWKEVCFACVDGK 1264
Query: 558 EFRLAQVCGINIIVHGDELEELIRQYED 641
EFRLAQ+CG++I+VH DELEELI Y+D
Sbjct: 1265 EFRLAQMCGLHIVVHADELEELINYYQD 1292
Score = 163 bits (413), Expect = 2e-38
Identities = 74/119 (62%), Positives = 96/119 (80%)
Frame = +1
Query: 652 LAQKLEKHELLEFRRIAAYLYKKNNRWAQSVELSKKDKLYKXAIQXASDSXNPAIGEXLL 831
LAQ+LEKHEL+EFRRIAAYL+K NNRW QSVEL KKDKLYK A+Q AS+S + + E LL
Sbjct: 1495 LAQRLEKHELIEFRRIAAYLFKGNNRWKQSVELCKKDKLYKDAMQYASESKDTELTEELL 1554
Query: 832 QYFVDQQNNSAFAACLYTCYDFLKPDAVIELAWXNNILNYSFPYXIQYVKEYTTKVDQL 1008
Q+F+D+ FAACL+TCYD L+PD V+E +W NNI++++ PY IQ ++EY +KVD+L
Sbjct: 1555 QWFLDENKKECFAACLFTCYDLLRPDVVLETSWRNNIMDFAMPYFIQVMREYLSKVDKL 1613
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 5349213
Number of Hits to DB: 2,982,062,933
Number of extensions: 52099305
Number of successful extensions: 131016
Number of sequences better than 10.0: 147
Number of HSP's gapped: 130915
Number of HSP's successfully gapped: 213
Length of query: 427
Length of database: 1,732,582,204
Length adjustment: 135
Effective length of query: 292
Effective length of database: 1,010,438,449
Effective search space: 295048027108
Effective search space used: 295048027108
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 32 (16.9 bits)
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