Dictyostelium discoideum cDNA Clone AFH830

Sequence AFH830

ACTGTTGGCC TACTGGTTTA ATCACTCATA TTGGTTCAAT TGAAAGAGCT
CATGATTTCG CTGAACGTTG TAATCAAACC GAGGTTTACA GTAAATTGGG
TGTTGCTCAA TTGAAAGCAG AAATGGTCAA AGAATGTATT GAATCATTCA
TTAAAGCCAA TGATACTGAA CATTATCAAG AGGTTGTCGC TGCCGCTGAA
AGAAAAGATG AATATGAAGA TTTGGTTAAA TTCCTTCAAA TGTGTCGTAA
GAAGATTAAA GAACCAGCCA TTGAAAGTGA ATTGATCTTT GCTTATGCTA
AAGTTAACAA ATTGGCCGAA ATGGAAGATT TCATCAACTC ACCAAACTCT
GCTCACATTC AAGTCGTTGG TGATCGTTGT TTCGAAAATG GTCTCTATGA
AGCTGCCAAA GTACTCTATA CCAATATTTC CAACTTTTCA CGTCTTACCA
GTTGTCTCGT CAAATTAGGT CAATATCAAG CTGCCGTCGA TGCTGCACGT
AAAGCCAACT CCACCAAAAC TTGGAAAGAA GTTAGTGCTG CTTGCATCGA
TGCCAAGGAA TTCCGTTTGG CACAAGTTTG TGGTATCAAT ATCATTGTAC
ATGGTGATGA ACTTGAAGAA TTAATTCGTC AATATGAAGA T---------
-CTCGCTCAA AAACTTGAAA AACATGAACT CCTCGAATTC CGTAGAATCG
CCGCCTATTT GTACAAAAAG AATAATCGTT GGGCTCAATC AGTTGAACTC
TCTAAAAAAG ATAAACTNTA CAAANATGCC ATTCAATNTG CCTCAGACTC
AAANAATCCA GCCATTGGCG AANAACTTTT ACAATACTTT GTTGATCAAC
AAAATAATAG TGCCTTTGCT GCTTGTCTTT ACACTTGTTA CGACTTTTTG
AAACCAGATG CTGTCATCGA ATTGGCTTGG ANAAATAATA TCCTCAATTA
CTCATTCCCA TATNTCATTC AATACGTTAA AGAATATACA ACCAAAGTTG
ATCAATTGGT CGATGATTTC AAAGCTCGTC AAAAGAAAAC TGAAGAAGAA
AAAGAACAAC AAAATATTGA ATCCTCTCAA TATCAACCAG ATCTTACTAA
CCTCTCATAT GGTTACGCAG CCNCTGGTGG TATGTTAGCT CTTCCNCCAG
CTGTAGGATA TCAACAACAA CAACAACCNC AACAAATGTA TAATCCAAAT
CAAATGATGG GTGGTTTCCA ACAAAATTAT AATCAATACG GGGTTTTTAA
ATAAAAAAAA AATAAAATAA AATAAAAAAA AA

Translated Amino Acid Sequence AFH830

CWPTGLITHIGSIERAHDFAERCNQTEVYSKLGVAQLKAEMVKECIESFIKANDTEHYQE
VVAAAERKDEYEDLVKFLQMCRKKIKEPAIESELIFAYAKVNKLAEMEDFINSPNSAHIQ
VVGDRCFENGLYEAAKVLYTNISNFSRLTSCLVKLGQYQAAVDAARKANSTKTWKEVSAA
CIDAKEFRLAQVCGINIIVHGDELEELIRQYED---

---LAQKLEKHELLEFRRIAAYLYKKNNRWAQSVELSKKDKLYKXAIQXASDSXNPAIGE
XLLQYFVDQQNNSAFAACLYTCYDFLKPDAVIELAWXNNILNYSFPYXIQYVKEYTTKVD
QLVDDFKARQKKTEEEKEQQNIESSQYQPDLTNLSYGYAAXGGMLALPPAVGYQQQQQPQ
QMYNPNQMMGGFQQNYNQYGVFK*kknkik*kk

Homology AFH830 vs CSM-cDNA

Sequences producing significant alignments:                      (bits) Value


AFH830 (AFH830Q) /CSM/AF/AFH8-B/AFH830Q.Seq.d/                       2189   0.0
VFA491 (VFA491Q) /CSM/VF/VFA4-D/VFA491Q.Seq.d/                       1178   0.0
VHN787 (VHN787Q) /CSM/VH/VHN7-D/VHN787Q.Seq.d/                        957   0.0
VHH403 (VHH403Q) /CSM/VH/VHH4-A/VHH403Q.Seq.d/                        957   0.0
SHF308 (SHF308Q) /CSM/SH/SHF3-A/SHF308Q.Seq.d/                        957   0.0
AHO558 (AHO558Q) /CSM/AH/AHO5-C/AHO558Q.Seq.d/                        957   0.0
AHH834 (AHH834Q) /CSM/AH/AHH8-B/AHH834Q.Seq.d/                        957   0.0
AHE144 (AHE144Q) /CSM/AH/AHE1-B/AHE144Q.Seq.d/                        957   0.0
AHA847 (AHA847Q) /CSM/AH/AHA8-B/AHA847Q.Seq.d/                        957   0.0
AHA685 (AHA685Q) /CSM/AH/AHA6-D/AHA685Q.Seq.d/                        957   0.0

Homology AFH830 vs DNA

Sequences producing significant alignments:                  (bits) Value  N


M83660|M83660.1 Dictyostelium discoideum clathrin heavy chai...  1239   0.0    2
AC116960|AC116960.2 Dictyostelium discoideum chromosome 2 ma...    34   0.034  11
AC115763|AC115763.10 Mus musculus chromosome 15, clone RP23-...    50   0.085  1
AF243438|AF243438.1 Gallid herpesvirus 2 serotype 1 isolate ...    34   0.14   6
AL033502|AL033502.1 C.albicans cosmid Ca38F10.                     34   0.20   2
Z82262|Z82262.1 Caenorhabditis elegans cosmid C43F9.               42   0.22   2
AZ251985|AZ251985.1 RPCI-23-92F23.TJ RPCI-23 Mus musculus ge...    40   0.28   2
BG695221|BG695221.1 NISC_iv13h06.w1 Soares NMBP2 pituitary M...    40   0.33   2
BI389714|BI389714.1 pgp1c.pk001.l13 Primary Chicken Pituitar...    48   0.34   1
BU454874|BU454874.1 603769243F1 CSEQRBN14 Gallus gallus cDNA...    48   0.34   1

Homology AFH830 vs Protein

Sequences producing significant alignments:                      (bits) Value


AY648777_1(AY648777|pid:none) Danio rerio clatherin heavy chain ...   281   4e-74
BC163714_1(BC163714|pid:none) Danio rerio clathrin, heavy polype...   281   4e-74
BC084145_1(BC084145|pid:none) Xenopus tropicalis hypothetical LO...   278   5e-73
(Q00610) RecName: Full=Clathrin heavy chain 1; AltName: Full=Cla...   278   5e-73
AK143503_1(AK143503|pid:none) Mus musculus 8 cells embryo 8 cell...   278   5e-73
AL592222_6(AL592222|pid:none) Mouse DNA sequence from clone RP23...   278   5e-73
(P11442) RecName: Full=Clathrin heavy chain 1;  &J03583_1(J03583...   278   5e-73
BX640615_1(BX640615|pid:none) Homo sapiens mRNA; cDNA DKFZp686F1...   278   5e-73
D21260_1(D21260|pid:none) Homo sapiens KIAA0034 mRNA, partial cds.    278   5e-73
U60802_1(U60802|pid:none) Human clathrin heavy chain 2 (CLTCL) m...   271   6e-71

Homology AFH830 vs Genome