Dictyostelium discoideum cDNA Clone AFH646

Sequence AFH646

CACTGTTGGC CTACTGGNAA TTTCTCCAAT CATCATATTT ATAATTATAT
CTTTTTTGTT TAATAAAAAA GAAAGAATAC CAACATGAGA CTTTTATTGT
GTTTAATTTT CTTAGTTTTT GTTTTCAATT TTGCATTATC AACAGTTCAT
TTCAAAGATA CCTTTGATAA CGATTGGGAA TCAAGATGGG TTGTTAGTGA
TTGGCATAAA GAAGATGGTA AATCAGGTAA ATTAGTTCAT ACTGCAGGTA
AATGGTTTGG TGATGAAAAT CAAAAAGGTA TTCAAACTAG TGAAGATGCT
CGTTTCTACG CTGTATCAGC TAAATTCCCA AGTTTCAGTA ACAAAGGTAA
AGATTTAGTT CTCCAATACA CTGTAAAGAA TGAACAAAAA GTTGATTGTG
GTGGTTCATA CATCAAGTTA TTACCATCCA AATTAGATCA ATCAGCATTC
GATGGTGAAT CTGAATATTC CATTATGTTT GGTCCAGATG TTTGTGGTGC
CTCAAAGAGA GTTCACGTCA TTCTCAACTA CAAAGGAAAG AACCATTTAA
TCAAGAAAGA AATCAACAAA GTTGAAACCG ATCAATTAAC TCATCAA---
-------CGT AAAGGAAATC GATGACCCAG AAGATGTTAA ACCAGCCGGT
CATGACGATA TCCCAGCTTC AATCGTTGAT CCAGAAGCTG TCAAACCAGA
GGATTGGAAT GAAGAAGACG ACGGTGAATG GGAAGCCCCA ACCATCGCCA
ATCCAGAATA CAAAGGTGAA TGGAAAGCAA AGAAAATCCC AAATCCAGAA
TACAAAGGTG AATGGGTACA CCCATTAATT GATAACCCAG AATACGCTGA
AGACAATGAA CTCTACCTCT TTAATGATCT CGGTGCTATC GGTTTCGAAT
TATGGCAAGT TAAATCTGGT TCCATCTTTA ACAATATGAT CGTCACCGAC
TCTGTCGAAG AAGCTAAAGA TTTCTCTGAA AAGACCTTTG TTGCCAACCA
AGAAGCCGAA AAGAAAATGT TTGACGACCT CGAAGCCGCC AAAGCTGAAG
AGAGAAAGAA AGCTGACGAA AAGTTAGCTG CCGAAAAAGC TGCTGAAAAA
GAAGCCGAAG AAGCTGATGA AGAAGAAGAA GAAGTCGCTG AAGAAGATTT
AGTTAAAACT GATGACAAAA AAGAAGAAGT CAAAAAATCA ACCAAAAAAG
TNTATCATGA CGAACTTTAA ANAAATAAAT AAANAATAAA AAANNANCNA
A

Translated Amino Acid Sequence AFH646

hcwptgnfsnhhiynyiffv**KRKNTNMRLLLCLIFLVFVFNFALSTVHFKDTFDNDWE
SRWVVSDWHKEDGKSGKLVHTAGKWFGDENQKGIQTSEDARFYAVSAKFPSFSNKGKDLV
LQYTVKNEQKVDCGGSYIKLLPSKLDQSAFDGESEYSIMFGPDVCGASKRVHVILNYKGK
NHLIKKEINKVETDQLTHQ---

---VKEIDDPEDVKPAGHDDIPASIVDPEAVKPEDWNEEDDGEWEAPTIANPEYKGEWKA
KKIPNPEYKGEWVHPLIDNPEYAEDNELYLFNDLGAIGFELWQVKSGSIFNNMIVTDSVE
EAKDFSEKTFVANQEAEKKMFDDLEAAKAEERKKADEKLAAEKAAEKEAEEADEEEEEVA
EEDLVKTDDKKEEVKKSTKKVYHDEL*xnk*xikxxx

Homology AFH646 vs CSM-cDNA

Sequences producing significant alignments:                      (bits) Value


AFH646 (AFH646Q) /CSM/AF/AFH6-B/AFH646Q.Seq.d/                       2097   0.0
VFL214 (VFL214Q) /CSM/VF/VFL2-A/VFL214Q.Seq.d/                       1168   0.0
AFI321 (AFI321Q) /CSM/AF/AFI3-A/AFI321Q.Seq.d/                       1168   0.0
VFL283 (VFL283Q) /CSM/VF/VFL2-D/VFL283Q.Seq.d/                       1156   0.0
AFK274 (AFK274Q) /CSM/AF/AFK2-D/AFK274Q.Seq.d/                       1152   0.0
VFN642 (VFN642Q) /CSM/VF/VFN6-B/VFN642Q.Seq.d/                       1148   0.0
VFM435 (VFM435Q) /CSM/VF/VFM4-B/VFM435Q.Seq.d/                       1148   0.0
VFK631 (VFK631Q) /CSM/VF/VFK6-B/VFK631Q.Seq.d/                       1148   0.0
VFI619 (VFI619Q) /CSM/VF/VFI6-A/VFI619Q.Seq.d/                       1148   0.0
VFH220 (VFH220Q) /CSM/VF/VFH2-A/VFH220Q.Seq.d/                       1148   0.0

Homology AFH646 vs DNA

Sequences producing significant alignments:                  (bits) Value  N


U36937|U36937.1 Dictyostelium discoideum calreticulin mRNA, ...  1106   0.0    2
BD248385|BD248385.1 Gene participating in tolerance against ...    92   3e-23  3
BH160872|BH160872.1 ENTRI18TR Entamoeba histolytica Sheared ...    80   3e-17  3
AZ543757|AZ543757.1 ENTGD24TR Entamoeba histolytica Sheared ...    80   9e-11  1
BI921109|BI921109.1 EST541012 tomato callus Lycopersicon esc...    74   2e-10  2
AL750674|AL750674.1 Pinus pinaster root EST, clone RN06A11 s...    46   7e-10  4
CK247437|CK247437.1 EST731074 potato callus cDNA library, no...    66   4e-09  3
CK253744|CK253744.1 EST737381 potato callus cDNA library, no...    66   4e-09  3
AI782264|AI782264.1 EST263143 tomato susceptible, Cornell Ly...    74   6e-09  1
AW033447|AW033447.1 EST277018 tomato callus, TAMU Lycopersic...    74   6e-09  1

Homology AFH646 vs Protein

Sequences producing significant alignments:                      (bits) Value


CP002684_6164(CP002684|pid:none) Arabidopsis thaliana chromosome...   203   5e-91
AK318734_1(AK318734|pid:none) Arabidopsis thaliana AT1G56340 mRN...   203   5e-91
(Q40401) RecName: Full=Calreticulin; Flags: Precursor;  &T16968(...   203   7e-91
AB196794_1(AB196794|pid:none) Glycine max Gm crt-1 mRNA for calr...   201   2e-90
EU984501_1(EU984501|pid:none) Nicotiana tabacum calreticulin mRN...   201   2e-90
AF283816_1(AF283816|pid:none) Pinus taeda calreticulin mRNA, com...   198   3e-90
HC747438_1(HC747438|pid:none) Sequence 4529 from Patent WO201004...   203   4e-90
HC747456_1(HC747456|pid:none) Sequence 4547 from Patent WO201004...   202   6e-90
EF085019_1(EF085019|pid:none) Picea sitchensis clone WS0297_I16 ...   201   1e-89
HC747500_1(HC747500|pid:none) Sequence 4591 from Patent WO201004...   202   1e-89

Homology AFH646 vs Genome