Dictyostelium discoideum cDNA Clone AFG826

Sequence AFG826

TGGCCTACTG GAAAAGAATC AGGTACTTAT TTCCAATCAT TATTAGATCT
TAAAGATAAA TATGATAACC TTTTACAAAA TGCATTATAT AATGATAAAC
AATTCATTCA TTCAATTCAA CAAGCATTTG AATATTTTAT AAATTTAAAT
CCAAAATCAC CAGAATATAT TTCATTATTT ATTGATGAGA AATTAAAGAA
AGGATTAAAA GGAGTTAGTG AAGAAGAGGT TGATATCATA TTGGATAAGA
TATTGATGTT GTTTAGATTA ATTCAAGAAA AGGATGTATT TGAAAAATAC
TATAAACAAC ATTTAGCAAA ACGTTTATTA TTGGGTAGAA GTATATCAGA
CGATGCAGAA CGTAACATGA TTGCAAAGTT AAAGACAGAA TGTGGCTATC
AATTCACATC TAAATTGGAG GGTATGTTCA CCGATATGAG ATTATCACAA
GATACAATGA GTGGTTTTAA AACTTATATT CAAAATCTAA AGAAGGCATT
ACCAATCGAT TTGAATGTTC ACGTTTTAAC CACTGGTTTT TGGCCAACTC
AAAACACTGC AAACTGTAAT TTACCTCGTG AAATCCTCTT ATGTTGTGAG
GCTTTCAAAT CTTATTATCT ATCAAATCAT AATGGTCGTC TATTGTTATG
GCAAACTAAT ATGGGTACCG CAGAAATTAA AGCAAACTTC CCTTCGAAAT
CTCACGAACT TCAAGTTTCC TCCTATCAAA TGGTCATCTT ATTACTCTTT
AATGACCAAT CGAAATTAAC CTTTAAAGAG ATTGCTGATC AAACTGGTAT
TCCAACTATT GATTTAAAGA GAAATCTTTT AGCTTTAACA AATCCAAAGA
ATAAAATTTT AGATAGAGAA TTACCATCAA CAACATCATC AACAACAACA
ACAACAACAA CAGCAACATC ATCATCAACT TCAACTTCAC CATCTAGTAG
TTCATCTTCA ATCTCCACTC CAACACCAAG TAAATCAATT GATGAATCCG
ATGTATTCGC TTTTAATACT AAATTTAAGA GTAAATTATT CCGTGTTAAA
GTTATGGCAG TCGTTCAAAA AGAAACACCA GTTGAAGAGA AAGAAACTCG
TGATAAAGTT GATGAAGATA GAAAACATCA AATTGAAGCT TCCATCGTTC
GTATTATGAA AGCTCGTAAA ACACTTGAAC ACTCTAATCT TGTCTCTGAA
GTCATCAAGC AACTTCAATC TCGTTTTGTT CCAAATCCAG TCATTGTAAA
GAAACGTATC GAATCTTTAA TTGAAAGAGA ATATNCTNAA AGATCAAAAC
AAGACAGAAA GNATTTATAA TTATA

Translated Amino Acid Sequence AFG826

WPTGKESGTYFQSLLDLKDKYDNLLQNALYNDKQFIHSIQQAFEYFINLNPKSPEYISLF
IDEKLKKGLKGVSEEEVDIILDKILMLFRLIQEKDVFEKYYKQHLAKRLLLGRSISDDAE
RNMIAKLKTECGYQFTSKLEGMFTDMRLSQDTMSGFKTYIQNLKKALPIDLNVHVLTTGF
WPTQNTANCNLPREILLCCEAFKSYYLSNHNGRLLLWQTNMGTAEIKANFPSKSHELQVS
SYQMVILLLFNDQSKLTFKEIADQTGIPTIDLKRNLLALTNPKNKILDRELPSTTSSTTT
TTTTATSSSTSTSPSSSSSSISTPTPSKSIDESDVFAFNTKFKSKLFRVKVMAVVQKETP
VEEKETRDKVDEDRKHQIEASIVRIMKARKTLEHSNLVSEVIKQLQSRFVPNPVIVKKRI
ESLIEREYXXRSKQDRKXL*l

Homology AFG826 vs CSM-cDNA

Sequences producing significant alignments:                      (bits) Value


AFG826 (AFG826Q) /CSM/AF/AFG8-B/AFG826Q.Seq.d/                       1733   0.0
SSI609 (SSI609Q) /CSM/SS/SSI6-A/SSI609Q.Seq.d/                        771   0.0
SSC509 (SSC509Q) /CSM/SS/SSC5-A/SSC509Q.Seq.d/                        765   0.0
VHB307 (VHB307Q) /CSM/VH/VHB3-A/VHB307Q.Seq.d/                        745   0.0
VHQ327 (VHQ327Q) /CSM/VH/VHQ3-B/VHQ327Q.Seq.d/                        735   0.0
CHC421 (CHC421Q) /CSM/CH/CHC4-A/CHC421Q.Seq.d/                        731   0.0
CFK287 (CFK287Q) /CSM/CF/CFK2-D/CFK287Q.Seq.d/                        720   0.0
CHQ457 (CHQ457Q) /CSM/CH/CHQ4-C/CHQ457Q.Seq.d/                        702   0.0
VHH207 (VHH207Q) /CSM/VH/VHH2-A/VHH207Q.Seq.d/                        700   0.0
VSK353 (VSK353Q) /CSM/VS/VSK3-C/VSK353Q.Seq.d/                        630   e-179

Homology AFG826 vs DNA

Sequences producing significant alignments:                  (bits) Value  N


BJ624015|BJ624015.1 Xenopus laevis cDNA clone:XL206o05, 5' end.    78   1e-15  3
CA973332|CA973332.1 AGENCOURT_10765552 Wellcome CRC pSK egg ...    78   3e-15  3
BC073186|BC073186.1 Xenopus laevis cDNA clone MGC:80402 IMAG...    72   7e-14  3
AW646595|AW646595.1 cm66f04.w1 Blackshear/Soares normalized ...    78   7e-13  2
CD301136|CD301136.1 AGENCOURT_14240269 NICHD_XGC_Eye1 Xenopu...    78   1e-12  2
CA519637|CA519637.1 KS10028C04 KS10 Capsicum annuum cDNA, mR...    46   3e-12  4
BQ999141|BQ999141.1 QGG21D21.yg.ab1 QG_EFGHJ lettuce serriol...    52   8e-10  3
BC077239|BC077239.1 Xenopus laevis cDNA clone MGC:79108 IMAG...    56   1e-07  4
AF144717|AF144717.1 Dictyostelium discoideum CulB mRNA, comp...    50   4e-07  2
CF809226|CF809226.1 psHB043xN08f USDA-IFAFS:Expression of Ph...    56   2e-06  2

Homology AFG826 vs Protein

Sequences producing significant alignments:                      (bits) Value


(Q54NZ5) RecName: Full=Cullin-3;          Short=CUL-3; AltName: ...   735   0.0
FB802359_1(FB802359|pid:none) Sequence 21632 from Patent WO20080...   438   e-121
AK072402_1(AK072402|pid:none) Oryza sativa Japonica Group cDNA c...   437   e-121
AM484063_2(AM484063|pid:none) Vitis vinifera contig VV78X066416....   437   e-121
AM478489_5(AM478489|pid:none) Vitis vinifera contig VV78X092018....   432   e-119
AC146568_18(AC146568|pid:none) Medicago truncatula clone mth2-10...   430   e-119
HB836850_1(HB836850|pid:none) Sequence 186064 from Patent EP2090...   429   e-118
(Q9C9L0) RecName: Full=Cullin-3B;          Short=AtCUL3b;  &AC01...   429   e-118
AJ344541_1(AJ344541|pid:none) Arabidopsis thaliana partial mRNA ...   429   e-118
(Q9ZVH4) RecName: Full=Cullin-3A;          Short=AtCUL3a;  &A863...   424   e-117

Homology AFG826 vs Genome