Homology AFG826 vs DNA
Query= AFG826 (AFG826Q) /CSM/AF/AFG8-B/AFG826Q.Seq.d/
(1325 letters)
Database: ddbjhum1.seq; ddbjhum10.seq; ddbjhum11.seq; ddbjhum12.seq;
ddbjhum13.seq; ddbjhum14.seq; ddbjhum15.seq; ddbjhum16.seq;
ddbjhum17.seq; ddbjhum18.seq; ddbjhum19.seq; ddbjhum2.seq;
ddbjhum20.seq; ddbjhum21.seq; ddbjhum22.seq; ddbjhum23.seq;
ddbjhum24.seq; ddbjhum3.seq; ddbjhum4.seq; ddbjhum5.seq; ddbjhum6.seq;
ddbjhum7.seq; ddbjhum8.seq; ddbjhum9.seq;
/db/DDBJNEW.DATA/a/new_ddbjhum.seq; ddbjpri.seq;
/db/DDBJNEW.DATA/a/new_ddbjpri.seq; ddbjrod1.seq; ddbjrod10.seq;
ddbjrod2.seq; ddbjrod3.seq; ddbjrod4.seq; ddbjrod5.seq; ddbjrod6.seq;
ddbjrod7.seq; ddbjrod8.seq; ddbjrod9.seq;
/db/DDBJNEW.DATA/a/new_ddbjrod.seq; ddbjmam.seq;
/db/DDBJNEW.DATA/a/new_ddbjmam.seq; ddbjvrt1.seq; ddbjvrt2.seq;
ddbjvrt3.seq; ddbjvrt4.seq; ddbjvrt5.seq;
/db/DDBJNEW.DATA/a/new_ddbjvrt.seq; ddbjinv1.seq; ddbjinv2.seq;
ddbjinv3.seq; ddbjinv4.seq; ddbjinv5.seq; ddbjinv6.seq;
/db/DDBJNEW.DATA/a/new_ddbjinv.seq; ddbjpln1.seq; ddbjpln10.seq;
ddbjpln2.seq; ddbjpln3.seq; ddbjpln4.seq; ddbjpln5.seq; ddbjpln6.seq;
ddbjpln7.seq; ddbjpln8.seq; ddbjpln9.seq;
/db/DDBJNEW.DATA/a/new_ddbjpln.seq; ddbjbct1.seq; ddbjbct2.seq;
ddbjbct3.seq; ddbjbct4.seq; ddbjbct5.seq; ddbjbct6.seq; ddbjbct7.seq;
ddbjbct8.seq; /db/DDBJNEW.DATA/a/new_ddbjbct.seq; ddbjvrl1.seq;
ddbjvrl2.seq; ddbjvrl3.seq; /db/DDBJNEW.DATA/a/new_ddbjvrl.seq;
ddbjphg.seq; /db/DDBJNEW.DATA/a/new_ddbjphg.seq; ddbjuna.seq;
/db/DDBJNEW.DATA/a/new_ddbjuna.seq; ddbjgss1.seq; ddbjgss10.seq;
ddbjgss11.seq; ddbjgss12.seq; ddbjgss13.seq; ddbjgss14.seq;
ddbjgss15.seq; ddbjgss16.seq; ddbjgss17.seq; ddbjgss18.seq;
ddbjgss19.seq; ddbjgss2.seq; ddbjgss20.seq; ddbjgss21.seq;
ddbjgss22.seq; ddbjgss23.seq; ddbjgss24.seq; ddbjgss25.seq;
ddbjgss26.seq; ddbjgss27.seq; ddbjgss28.seq; ddbjgss29.seq;
ddbjgss3.seq; ddbjgss30.seq; ddbjgss31.seq; ddbjgss32.seq;
ddbjgss33.seq; ddbjgss34.seq; ddbjgss35.seq; ddbjgss36.seq;
ddbjgss37.seq; ddbjgss38.seq; ddbjgss39.seq; ddbjgss4.seq;
ddbjgss40.seq; ddbjgss41.seq; ddbjgss42.seq; ddbjgss43.seq;
ddbjgss44.seq; ddbjgss45.seq; ddbjgss46.seq; ddbjgss47.seq;
ddbjgss48.seq; ddbjgss49.seq; ddbjgss5.seq; ddbjgss50.seq;
ddbjgss51.seq; ddbjgss52.seq; ddbjgss53.seq; ddbjgss54.seq;
ddbjgss55.seq; ddbjgss56.seq; ddbjgss57.seq; ddbjgss58.seq;
ddbjgss59.seq; ddbjgss6.seq; ddbjgss60.seq; ddbjgss61.seq;
ddbjgss62.seq; ddbjgss63.seq; ddbjgss64.seq; ddbjgss65.seq;
ddbjgss66.seq; ddbjgss67.seq; ddbjgss68.seq; ddbjgss69.seq;
ddbjgss7.seq; ddbjgss70.seq; ddbjgss71.seq; ddbjgss72.seq;
ddbjgss73.seq; ddbjgss74.seq; ddbjgss75.seq; ddbjgss76.seq;
ddbjgss77.seq; ddbjgss78.seq; ddbjgss79.seq; ddbjgss8.seq;
ddbjgss80.seq; ddbjgss81.seq; ddbjgss82.seq; ddbjgss83.seq;
ddbjgss9.seq; /db/DDBJNEW.DATA/a/new_ddbjgss1.seq;
/db/DDBJNEW.DATA/a/new_ddbjgss2.seq;
/db/DDBJNEW.DATA/a/new_ddbjgss3.seq; ddbjhtg1.seq; ddbjhtg10.seq;
ddbjhtg11.seq; ddbjhtg12.seq; ddbjhtg13.seq; ddbjhtg14.seq;
ddbjhtg15.seq; ddbjhtg16.seq; ddbjhtg17.seq; ddbjhtg18.seq;
ddbjhtg19.seq; ddbjhtg2.seq; ddbjhtg20.seq; ddbjhtg21.seq;
ddbjhtg22.seq; ddbjhtg23.seq; ddbjhtg24.seq; ddbjhtg25.seq;
ddbjhtg26.seq; ddbjhtg27.seq; ddbjhtg28.seq; ddbjhtg29.seq;
ddbjhtg3.seq; ddbjhtg30.seq; ddbjhtg31.seq; ddbjhtg32.seq;
ddbjhtg33.seq; ddbjhtg34.seq; ddbjhtg35.seq; ddbjhtg36.seq;
ddbjhtg37.seq; ddbjhtg38.seq; ddbjhtg39.seq; ddbjhtg4.seq;
ddbjhtg40.seq; ddbjhtg41.seq; ddbjhtg42.seq; ddbjhtg43.seq;
ddbjhtg44.seq; ddbjhtg45.seq; ddbjhtg46.seq; ddbjhtg47.seq;
ddbjhtg48.seq; ddbjhtg49.seq; ddbjhtg5.seq; ddbjhtg50.seq;
ddbjhtg51.seq; ddbjhtg52.seq; ddbjhtg6.seq; ddbjhtg7.seq;
ddbjhtg8.seq; ddbjhtg9.seq; /db/DDBJNEW.DATA/a/new_ddbjhtg1.seq;
/db/DDBJNEW.DATA/a/new_ddbjhtg2.seq; ddbjpat1.seq; ddbjpat10.seq;
ddbjpat11.seq; ddbjpat12.seq; ddbjpat13.seq; ddbjpat14.seq;
ddbjpat2.seq; ddbjpat3.seq; ddbjpat4.seq; ddbjpat5.seq; ddbjpat6.seq;
ddbjpat7.seq; ddbjpat8.seq; ddbjpat9.seq;
/db/DDBJNEW.DATA/a/new_ddbjpat.seq; ddbjsts1.seq; ddbjsts2.seq;
ddbjsts3.seq; ddbjsts4.seq; /db/DDBJNEW.DATA/a/new_ddbjsts.seq;
ddbjsyn.seq; /db/DDBJNEW.DATA/a/new_ddbjsyn.seq; est_atha1.seq;
/db/DDBJNEW.DATA/a/new_est_atha1.seq; est_btra1.seq;
/db/DDBJNEW.DATA/a/new_est_btra1.seq; est_cele1.seq;
/db/DDBJNEW.DATA/a/new_est_cele1.seq; est_crei1.seq;
/db/DDBJNEW.DATA/a/new_est_crei1.seq; est_cint1.seq;
/db/DDBJNEW.DATA/a/new_est_cint1.seq; est_drer1.seq;
/db/DDBJNEW.DATA/a/new_est_drer1.seq; est_dmel1.seq;
/db/DDBJNEW.DATA/a/new_est_dmel1.seq; est_ggal1.seq;
/db/DDBJNEW.DATA/a/new_est_ggal1.seq; est_gmax1.seq;
/db/DDBJNEW.DATA/a/new_est_gmax1.seq; est_hum1.seq; est_hum2.seq;
est_hum3.seq; est_hum4.seq; /db/DDBJNEW.DATA/a/new_est_hum1.seq;
est_hvul1.seq; /db/DDBJNEW.DATA/a/new_est_hvul1.seq; est_lesc1.seq;
/db/DDBJNEW.DATA/a/new_est_lesc1.seq; est_mous1.seq; est_mous2.seq;
est_mous3.seq; /db/DDBJNEW.DATA/a/new_est_mous1.seq; est_mtru1.seq;
est_osat1.seq; /db/DDBJNEW.DATA/a/new_est_osat1.seq; est_rnor1.seq;
/db/DDBJNEW.DATA/a/new_est_rnor1.seq; est_stro1.seq; est_taes1.seq;
/db/DDBJNEW.DATA/a/new_est_taes1.seq; est_xlae1.seq;
/db/DDBJNEW.DATA/a/new_est_xlae1.seq; est_zmay1.seq;
/db/DDBJNEW.DATA/a/new_est_zmay1.seq; est_rest1.seq; est_rest2.seq;
est_rest3.seq; est_rest4.seq; /db/DDBJNEW.DATA/a/new_est_rest1.seq
37,349,091 sequences; Z,119,155,597 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value N
BJ624015|BJ624015.1 Xenopus laevis cDNA clone:XL206o05, 5' end. 78 1e-15 3
CA973332|CA973332.1 AGENCOURT_10765552 Wellcome CRC pSK egg ... 78 3e-15 3
BC073186|BC073186.1 Xenopus laevis cDNA clone MGC:80402 IMAG... 72 7e-14 3
AW646595|AW646595.1 cm66f04.w1 Blackshear/Soares normalized ... 78 7e-13 2
CD301136|CD301136.1 AGENCOURT_14240269 NICHD_XGC_Eye1 Xenopu... 78 1e-12 2
CA519637|CA519637.1 KS10028C04 KS10 Capsicum annuum cDNA, mR... 46 3e-12 4
BQ999141|BQ999141.1 QGG21D21.yg.ab1 QG_EFGHJ lettuce serriol... 52 8e-10 3
BC077239|BC077239.1 Xenopus laevis cDNA clone MGC:79108 IMAG... 56 1e-07 4
AF144717|AF144717.1 Dictyostelium discoideum CulB mRNA, comp... 50 4e-07 2
CF809226|CF809226.1 psHB043xN08f USDA-IFAFS:Expression of Ph... 56 2e-06 2
AK129174|AK129174.1 Mus musculus mRNA for mKIAA0617 protein. 36 2e-06 5
AY409589|AY409589.1 Mus musculus CUL3 gene, VIRTUAL TRANSCRI... 36 4e-06 4
AF129738|AF129738.1 Mus musculus cullin 3 (Cul3) mRNA, compl... 36 6e-06 4
AC006535|AC006535.7 Genomic sequence for Arabidopsis thalian... 64 6e-06 1
AJ344252|AJ344252.1 Arabidopsis thaliana mRNA for cullin 3a ... 64 6e-06 1
AC005508|AC005508.1 Arabidopsis thaliana chromosome I BAC T2... 64 6e-06 1
AJ319540|AJ319540.1 Arabidopsis thaliana partial mRNA for cu... 64 6e-06 1
BC027304|BC027304.1 Mus musculus cullin 3, mRNA (cDNA clone ... 36 8e-06 4
CA514297|CA514297.1 KS09022E04 KS09 Capsicum annuum cDNA, mR... 46 2e-05 3
AJ693638|AJ693638.1 Bos taurus EST, clone KN261-041_N09. 52 2e-05 2
CK537689|CK537689.1 rswgb0_006947.y1 swg Bombyx mori cDNA, m... 54 3e-05 2
CK974709|CK974709.1 4105680 BARC 9BOV Bos taurus cDNA clone ... 52 3e-05 2
BI968363|BI968363.1 GM830005A12A01 Gm-r1083 Glycine max cDNA... 52 4e-05 2
AA414800|AA414800.1 vc72g10.s1 Knowles Solter mouse 2 cell M... 36 4e-05 3
BE847840|BE847840.1 uw41f11.y1 Soares_thymus_2NbMT Mus muscu... 36 4e-05 3
CK621811|CK621811.1 ml29a05.y1 Mouse retina, unamplified: mk... 36 6e-05 3
AA959077|AA959077.1 ua08e04.r1 Soares_thymus_2NbMT Mus muscu... 36 6e-05 3
BE851177|BE851177.1 uw93b03.y1 Soares_mammary_gland_NMLMG Mu... 36 6e-05 3
CB272355|CB272355.1 mai57d06.y1 McCarrey Eddy spermatocytes ... 36 6e-05 3
AA543345|AA543345.1 vj81a09.r1 Soares_mammary_gland_NbMMG Mu... 36 7e-05 3
AL677978|AL677978.2 Xenopus tropicalis EST, clone TGas056m06... 42 7e-05 3
AA792104|AA792104.1 vp47d05.r1 Knowles Solter mouse 2 cell M... 36 8e-05 3
CN001051|CN001051.1 io87a12.g1 Brain - Cerebellum Library (D... 42 9e-05 3
BI852975|BI852975.1 603379789F1 NCI_CGAP_Mam3 Mus musculus c... 36 1e-04 3
AL362572|AL362572.1 Mus musculus mRNA; expressed sequence ta... 36 1e-04 3
CA319607|CA319607.1 UI-M-FW0-cca-a-08-0-UI.r1 NIH_BMAP_FW0 M... 36 1e-04 3
CF148912|CF148912.1 AGENCOURT_14926132 NICHD_XGC_Emb7 Xenopu... 42 1e-04 3
BX764904|BX764904.1 Xenopus tropicalis EST, clone TGas140f09... 42 1e-04 3
BF165390|BF165390.1 601777273F1 NCI_CGAP_Lu29 Mus musculus c... 36 1e-04 3
CB944361|CB944361.1 AGENCOURT_13842178 NICHD_XGC_Tad2 Xenopu... 56 1e-04 2
BX764030|BX764030.1 Xenopus tropicalis EST, clone TGas090a08... 42 1e-04 3
CB201913|CB201913.1 AGENCOURT_11288768 NIH_MGC_135 Mus muscu... 36 1e-04 3
BX749985|BX749985.1 Xenopus tropicalis EST, clone TGas074a08... 42 2e-04 3
BQ958150|BQ958150.1 AGENCOURT_10031986 NCI_CGAP_Mam2 Mus mus... 36 2e-04 3
AW406889|AW406889.1 UI-HF-BK0-abi-a-06-0-UI.r1 NIH_MGC_36 Ho... 36 2e-04 3
CB111647|CB111647.1 K-EST0153367 L5HLK1 Homo sapiens cDNA cl... 36 3e-04 3
BG289031|BG289031.1 602383903F1 NIH_MGC_93 Homo sapiens cDNA... 36 3e-04 3
BE622173|BE622173.1 601440736F1 NIH_MGC_72 Homo sapiens cDNA... 36 3e-04 3
AR271569|AR271569.1 Sequence 1 from patent US 6503729. 34 3e-04 29
AP005501|AP005501.3 Oryza sativa (japonica cultivar-group) g... 58 4e-04 1
AK061805|AK061805.1 Oryza sativa (japonica cultivar-group) c... 58 4e-04 1
AP005606|AP005606.3 Oryza sativa (japonica cultivar-group) g... 58 4e-04 1
AK066234|AK066234.1 Oryza sativa (japonica cultivar-group) c... 58 4e-04 1
BU570075|BU570075.1 AGENCOURT_10400001 NIH_MGC_82 Homo sapie... 36 4e-04 3
CB107465|CB107465.1 K-EST0146766 L3SNU475 Homo sapiens cDNA ... 36 4e-04 3
CF595487|CF595487.1 AGENCOURT_15668330 NCI_CGAP_St3 Homo sap... 36 4e-04 3
AU136604|AU136604.1 Homo sapiens cDNA clone:PLACE1004662, 5'... 36 5e-04 3
AL585070|AL585070.1 Gallus gallus mRNA; expressed sequence t... 48 5e-04 2
BU189364|BU189364.1 AGENCOURT_7970886 NIH_MGC_72 Homo sapien... 36 5e-04 3
BU602857|BU602857.1 AGENCOURT_10015191 NIH_MGC_142 Homo sapi... 36 5e-04 3
CD171621|CD171621.1 AGENCOURT_14065769 NIH_MGC_180 Homo sapi... 36 5e-04 3
CN802089|CN802089.1 ILLUMIGEN_MCQ_37614 Katze_MMBR Macaca mu... 36 5e-04 3
BU191284|BU191284.1 AGENCOURT_7974435 NIH_MGC_110 Homo sapie... 36 6e-04 3
BQ687143|BQ687143.1 AGENCOURT_8034180 NIH_MGC_110 Homo sapie... 36 6e-04 3
BM550409|BM550409.1 AGENCOURT_6541947 NIH_MGC_72 Homo sapien... 36 8e-04 3
BM563477|BM563477.1 AGENCOURT_6564740 NIH_MGC_119 Homo sapie... 36 8e-04 3
CF750034|CF750034.1 UI-M-HJ0-cml-c-23-0-UI.r1 NIH_BMAP_HJ0 M... 36 0.001 3
CB235934|CB235934.1 AGENCOURT_11473809 NIH_MGC_166 Mus muscu... 36 0.001 3
BJ570910|BJ570910.1 Ipomoea nil cDNA clone:jm9p22, 3' end, s... 56 0.001 1
CB577950|CB577950.1 AMGNNUC:NRHY3-00183-E10-A W Rat hypothal... 46 0.002 2
BX451917|BX451917.2 human full-length cDNA 5-PRIME end of cl... 36 0.002 3
CO129195|CO129195.1 GR__Eb26K15.r GR__Eb Gossypium raimondii... 46 0.002 2
BX451916|BX451916.1 human full-length cDNA 5-PRIME end of cl... 36 0.002 3
CQ719239|CQ719239.1 Sequence 5173 from Patent WO02068579. 36 0.003 3
AX336383|AX336383.1 Sequence 6892 from Patent WO0194629. 36 0.003 3
AR380391|AR380391.1 Sequence 936 from patent US 6607879. 36 0.003 3
U58089|U58089.1 Human Hs-cul-3 mRNA, partial cds. 36 0.003 3
AY409587|AY409587.1 Homo sapiens CUL3 gene, VIRTUAL TRANSCRI... 36 0.003 3
AX677623|AX677623.1 Sequence 401 from Patent WO02086122. 36 0.003 3
CB144138|CB144138.1 K-EST0198368 L16HLK3 Homo sapiens cDNA c... 42 0.004 2
AF064087|AF064087.1 Homo sapiens cullin 3 mRNA, complete cds. 36 0.004 3
AF062537|AF062537.1 Homo sapiens cullin 3 mRNA, complete cds. 36 0.004 3
BC039598|BC039598.1 Homo sapiens cullin 3, mRNA (cDNA clone ... 36 0.005 3
AC006279|AC006279.8 Plasmodium falciparum chromosome 12 clon... 36 0.005 14
AY337761|AY337761.1 Homo sapiens cullin 3 isoform (CUL3) mRN... 36 0.005 3
BI503545|BI503545.1 BB170031B10G04.5 Bee Brain Normalized/Su... 54 0.006 1
AC146568|AC146568.11 Medicago truncatula clone mth2-101o18, ... 54 0.006 1
CN890171|CN890171.1 010617AAWA009159HT (AAWA) Royal Gala 59 ... 54 0.006 1
CR382400|CR382400.1 Plasmodium falciparum chromosome 6, comp... 38 0.006 15
CF409297|CF409297.1 CH3#059_G08T7 Canine heart normalized cD... 42 0.009 2
AC135953|AC135953.2 Macaca mulatta clone CH250-30N10, WORKIN... 32 0.010 13
AG224785|AG224785.1 Lotus corniculatus var. japonicus DNA, c... 42 0.010 3
AC116984|AC116984.2 Dictyostelium discoideum chromosome 2 ma... 32 0.010 18
AC116979|AC116979.3 Dictyostelium discoideum chromosome 2 ma... 44 0.011 13
>BJ624015|BJ624015.1 Xenopus laevis cDNA clone:XL206o05, 5' end.
Length = 702
Score = 77.8 bits (39), Expect(3) = 1e-15
Identities = 60/67 (89%)
Strand = Plus / Plus
Query: 364 aacatgattgcaaagttaaagacagaatgtggctatcaattcacatctaaattggagggt 423
||||||||| ||||||||||||| |||||||||| ||| ||||| || |||||||||||
Sbjct: 368 aacatgatttcaaagttaaagactgaatgtggctgtcagttcacgtccaaattggagggc 427
Query: 424 atgttca 430
|||||||
Sbjct: 428 atgttca 434
Score = 34.2 bits (17), Expect(3) = 1e-15
Identities = 17/17 (100%)
Strand = Plus / Plus
Query: 298 tactataaacaacattt 314
|||||||||||||||||
Sbjct: 302 tactataaacaacattt 318
Score = 32.2 bits (16), Expect(3) = 1e-15
Identities = 37/44 (84%)
Strand = Plus / Plus
Query: 170 tttcattatttattgatgagaaattaaagaaaggattaaaagga 213
|||| ||||||||||| || ||| |||| |||||| | ||||||
Sbjct: 174 tttccttatttattgacgacaaactaaaaaaaggagtcaaagga 217
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Number of Hits to DB: 40,410,803
Number of Sequences: 37349091
Number of extensions: 40410803
Number of successful extensions: 3611063
Number of sequences better than 10.0: 863
length of query: 1325
length of database: Z,119,155,597
effective HSP length: 23
effective length of query: 1302
effective length of database: Y,260,126,504
effective search space: 53720684708208
effective search space used: 53720684708208
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 22 (44.1 bits)
[blastall] WARNING: [000.000] Reached max 400 HSPs in BlastSaveCurrentHsp, continuing with this limit
ANTI-DNA BLAST search was processed by blast@nig.ac.jp, National Institute of Genetics, Japan.
Dictyostelium discoideum cDNA Project Home