Dictyostelium discoideum cDNA Clone AFG661

Sequence AFG661

GTATTATATT CTCTCTTTAT TTCTTTTCTA TATATAGATA AATTTTTTTT
AGAAAAACTA AAAAAAAAAC CTCAAACAAT TAATACAAAA TGGTAAACAT
TGGTGGAACT CAAGAAAAAT GTACTGCATG TGCTAAAACT GTATACTTAA
CAGAAAAGAT TGTAGTTGAA GATAAAGAAG ATAAGAAAAC TTTCCACAAA
TTATGTTTAA AATGTACTCA CTGTAAGCTT ACATTAAGTC TTGGTAACTA
TGCATCATTA AATGGNGTAT TCTATTGTAA ACCACATTTC AAACAATTAT
TCGCCACCAA AGGTAACTAC GATGAAGGTT TCGGTAAATC AAAACATTCT
GAAAAATGGA CACCACAAGC CACCCCAACT GGTACTTCTT CATTCATTCC
AGTTGAAGAA TCAAAATCAT CAGAAAAGAA AGAAACACCA ACAACAATTT
CATCAAAATT CTCAGGATCA ACTGAAAAAT GTAATCTCTG TAATAAGACA
GTATATTTAA CAGAAAAGAT TGTTGTTGAA GATAAAGAAG ATAAGAAAGT
ATTACATAAA CAATGTTTGA AATGTACACA TTGTAGNGTT GTATTAAATC
TTGGTACCTA TGCATCAATG AAAGGTGTAT TCTATTGTAA ACCACATTTC
AAACAATTAT TCGCCACCAA AGGTAACTAT GATGAAGGTT TTGGTAACAA
CAAAGCCNCC CGATAAATGG GCACCACAAA CCA------- ---TAAACCN
AAACNCTTTN AAAAATGGGA AAATAACCCN TTNCCATNTT TANAAAAGGA
NAGCAGTTAT GNNCCNTCCG TTNAAAAGGN TGAATNTCAA ATGAANAANG
NTTCATNTGA ATNTGATGNT GATANATTTN AAAATATTNA CAATGATGAT
TTTGATNAAC CAANAAGNCA ACAACAACCA GTTTTTCAAC CANAA

Translated Amino Acid Sequence AFG661

vlyslfisflyidkffleklkkkpqtintkw*tlvelkknvlhvlklyt*qkrl*lkikk
irklstnyv*nvltvslh*vlvtmhh*mxysivnhisnnysppkvttmkvsvnqnilkng
hhkppqlvllhsfqlknqnhqkrkkhqqqfhqnsqdqlknvisvirqyi*qkrlllkikk
irkyyinnv*nvhivxly*ilvpmhq*KVYSIVNHISNNYSPPKVTMMKVLVTTKPPDKW
APQT---

---KPKXFXKWENNPXPXLXKXSSYXPSVXKXEXQMXXXSXEXDXDXFXNIXNDDFDXPX
XQQQPVFQPX

Homology AFG661 vs CSM-cDNA

Sequences producing significant alignments:                      (bits) Value


AFG661 (AFG661Q) /CSM/AF/AFG6-C/AFG661Q.Seq.d/                       1499   0.0
SFE749 (SFE749Q) /CSM/SF/SFE7-C/SFE749Q.Seq.d/                       1261   0.0
AFL234 (AFL234Q) /CSM/AF/AFL2-B/AFL234Q.Seq.d/                       1261   0.0
AFK438 (AFK438Q) /CSM/AF/AFK4-B/AFK438Q.Seq.d/                       1261   0.0
AFG565 (AFG565Q) /CSM/AF/AFG5-C/AFG565Q.Seq.d/                       1261   0.0
AFG415 (AFG415Q) /CSM/AF/AFG4-A/AFG415Q.Seq.d/                       1261   0.0
AFE756 (AFE756Q) /CSM/AF/AFE7-C/AFE756Q.Seq.d/                       1257   0.0
AFN295 (AFN295Q) /CSM/AF/AFN2-D/AFN295Q.Seq.d/                       1255   0.0
SFF706 (SFF706Q) /CSM/SF/SFF7-A/SFF706Q.Seq.d/                       1253   0.0
CHO514 (CHO514Q) /CSM/CH/CHO5-A/CHO514Q.Seq.d/                       1251   0.0

Homology AFG661 vs DNA

Sequences producing significant alignments:                  (bits) Value  N


AL929351|AL929351.1 Plasmodium falciparum strain 3D7, chromo...    34   0.012  13
BE858201|BE858201.1 7g19d02.x1 NCI_CGAP_Brn23 Homo sapiens c...    52   0.015  1
BH148338|BH148338.1 ENTPI92TF Entamoeba histolytica Sheared ...    46   0.016  2
AC140323|AC140323.1 Mus musculus chromosome UNK clone RP24-3...    38   0.033  9
BI504534|BI504534.1 BB170004B20D05.5 Bee Brain Normalized/Su...    38   0.046  2
BX322647|BX322647.10 Zebrafish DNA sequence *** SEQUENCING I...    36   0.049  12
AX602201|AX602201.1 Sequence 130 from Patent WO02092818.           38   0.12   8
BU904505|BU904505.1 AGENCOURT_10155025 NICHD_XGC_Kid1 Xenopu...    38   0.23   2
AG061423|AG061423.1 Pan troglodytes DNA, clone: PTB-049H12.F.      48   0.23   1
AE014852|AE014852.2 Plasmodium falciparum 3D7 chromosome 12,...    36   0.24   9

Homology AFG661 vs Protein

Sequences producing significant alignments:                      (bits) Value


AF184886_1(AF184886|pid:none) Nicotiana tabacum LIM domain prote...   116   2e-24
GQ901953_1(GQ901953|pid:none) Hevea brasiliensis LIM1 mRNA, comp...   114   6e-24
AC135208_4(AC135208|pid:none) Oryza sativa (japonica cultivar-gr...   114   8e-24
EF035040_1(EF035040|pid:none) Populus tremula x Populus alba LIM...   114   1e-23
EF146377_1(EF146377|pid:none) Populus trichocarpa clone WS0117_L...   114   1e-23
AM469183_1(AM469183|pid:none) Vitis vinifera contig VV78X221882....   114   1e-23
AC004665_22(AC004665|pid:none) Arabidopsis thaliana chromosome 2...   112   2e-23
EF148212_1(EF148212|pid:none) Populus trichocarpa clone WS0128_M...   112   2e-23
AK317129_1(AK317129|pid:none) Arabidopsis thaliana AT3G55770 mRN...   110   8e-23
EU496813_1(EU496813|pid:none) Nicotiana tabacum LIM domain prote...   110   1e-22

Homology AFG661 vs Genome