Homology AFG661 vs DNA
Query= AFG661 (AFG661Q) /CSM/AF/AFG6-C/AFG661Q.Seq.d/
(945 letters)
Database: ddbjhum1.seq; ddbjhum10.seq; ddbjhum11.seq; ddbjhum12.seq;
ddbjhum13.seq; ddbjhum14.seq; ddbjhum15.seq; ddbjhum16.seq;
ddbjhum17.seq; ddbjhum18.seq; ddbjhum19.seq; ddbjhum2.seq;
ddbjhum20.seq; ddbjhum21.seq; ddbjhum22.seq; ddbjhum23.seq;
ddbjhum24.seq; ddbjhum3.seq; ddbjhum4.seq; ddbjhum5.seq; ddbjhum6.seq;
ddbjhum7.seq; ddbjhum8.seq; ddbjhum9.seq;
/db/DDBJNEW.DATA/b/new_ddbjhum.seq; ddbjpri.seq;
/db/DDBJNEW.DATA/b/new_ddbjpri.seq; ddbjrod1.seq; ddbjrod10.seq;
ddbjrod2.seq; ddbjrod3.seq; ddbjrod4.seq; ddbjrod5.seq; ddbjrod6.seq;
ddbjrod7.seq; ddbjrod8.seq; ddbjrod9.seq;
/db/DDBJNEW.DATA/b/new_ddbjrod.seq; ddbjmam.seq;
/db/DDBJNEW.DATA/b/new_ddbjmam.seq; ddbjvrt1.seq; ddbjvrt2.seq;
ddbjvrt3.seq; ddbjvrt4.seq; /db/DDBJNEW.DATA/b/new_ddbjvrt.seq;
ddbjinv1.seq; ddbjinv2.seq; ddbjinv3.seq; ddbjinv4.seq; ddbjinv5.seq;
ddbjinv6.seq; /db/DDBJNEW.DATA/b/new_ddbjinv.seq; ddbjpln1.seq;
ddbjpln2.seq; ddbjpln3.seq; ddbjpln4.seq; ddbjpln5.seq; ddbjpln6.seq;
ddbjpln7.seq; ddbjpln8.seq; ddbjpln9.seq;
/db/DDBJNEW.DATA/b/new_ddbjpln.seq; ddbjbct1.seq; ddbjbct2.seq;
ddbjbct3.seq; ddbjbct4.seq; ddbjbct5.seq; ddbjbct6.seq; ddbjbct7.seq;
/db/DDBJNEW.DATA/b/new_ddbjbct.seq; ddbjvrl1.seq; ddbjvrl2.seq;
ddbjvrl3.seq; /db/DDBJNEW.DATA/b/new_ddbjvrl.seq; ddbjphg.seq;
/db/DDBJNEW.DATA/b/new_ddbjphg.seq; ddbjuna.seq;
/db/DDBJNEW.DATA/b/new_ddbjuna.seq; ddbjgss1.seq; ddbjgss10.seq;
ddbjgss11.seq; ddbjgss12.seq; ddbjgss13.seq; ddbjgss14.seq;
ddbjgss15.seq; ddbjgss16.seq; ddbjgss17.seq; ddbjgss18.seq;
ddbjgss19.seq; ddbjgss2.seq; ddbjgss20.seq; ddbjgss21.seq;
ddbjgss22.seq; ddbjgss23.seq; ddbjgss24.seq; ddbjgss25.seq;
ddbjgss26.seq; ddbjgss27.seq; ddbjgss28.seq; ddbjgss29.seq;
ddbjgss3.seq; ddbjgss30.seq; ddbjgss31.seq; ddbjgss32.seq;
ddbjgss33.seq; ddbjgss34.seq; ddbjgss35.seq; ddbjgss36.seq;
ddbjgss37.seq; ddbjgss38.seq; ddbjgss39.seq; ddbjgss4.seq;
ddbjgss40.seq; ddbjgss41.seq; ddbjgss42.seq; ddbjgss43.seq;
ddbjgss44.seq; ddbjgss45.seq; ddbjgss46.seq; ddbjgss47.seq;
ddbjgss48.seq; ddbjgss49.seq; ddbjgss5.seq; ddbjgss50.seq;
ddbjgss51.seq; ddbjgss52.seq; ddbjgss53.seq; ddbjgss54.seq;
ddbjgss55.seq; ddbjgss56.seq; ddbjgss57.seq; ddbjgss58.seq;
ddbjgss59.seq; ddbjgss6.seq; ddbjgss60.seq; ddbjgss61.seq;
ddbjgss62.seq; ddbjgss63.seq; ddbjgss64.seq; ddbjgss65.seq;
ddbjgss66.seq; ddbjgss67.seq; ddbjgss68.seq; ddbjgss69.seq;
ddbjgss7.seq; ddbjgss70.seq; ddbjgss71.seq; ddbjgss72.seq;
ddbjgss73.seq; ddbjgss74.seq; ddbjgss75.seq; ddbjgss76.seq;
ddbjgss77.seq; ddbjgss78.seq; ddbjgss79.seq; ddbjgss8.seq;
ddbjgss80.seq; ddbjgss9.seq; /db/DDBJNEW.DATA/b/new_ddbjgss1.seq;
ddbjhtg1.seq; ddbjhtg10.seq; ddbjhtg11.seq; ddbjhtg12.seq;
ddbjhtg13.seq; ddbjhtg14.seq; ddbjhtg15.seq; ddbjhtg16.seq;
ddbjhtg17.seq; ddbjhtg18.seq; ddbjhtg19.seq; ddbjhtg21.seq;
ddbjhtg22.seq; ddbjhtg23.seq; ddbjhtg24.seq; ddbjhtg25.seq;
ddbjhtg26.seq; ddbjhtg27.seq; ddbjhtg28.seq; ddbjhtg29.seq;
ddbjhtg3.seq; ddbjhtg30.seq; ddbjhtg31.seq; ddbjhtg32.seq;
ddbjhtg33.seq; ddbjhtg34.seq; ddbjhtg35.seq; ddbjhtg36.seq;
ddbjhtg37.seq; ddbjhtg38.seq; ddbjhtg39.seq; ddbjhtg4.seq;
ddbjhtg40.seq; ddbjhtg41.seq; ddbjhtg42.seq; ddbjhtg43.seq;
ddbjhtg44.seq; ddbjhtg45.seq; ddbjhtg46.seq; ddbjhtg47.seq;
ddbjhtg48.seq; ddbjhtg49.seq; ddbjhtg5.seq; ddbjhtg50.seq;
ddbjhtg51.seq; ddbjhtg52.seq; ddbjhtg6.seq; ddbjhtg7.seq;
ddbjhtg8.seq; ddbjhtg9.seq; /db/DDBJNEW.DATA/b/new_ddbjhtg1.seq;
ddbjpat1.seq; ddbjpat10.seq; ddbjpat2.seq; ddbjpat3.seq; ddbjpat4.seq;
ddbjpat5.seq; ddbjpat6.seq; ddbjpat7.seq; ddbjpat8.seq; ddbjpat9.seq;
/db/DDBJNEW.DATA/b/new_ddbjpat.seq; ddbjsts1.seq; ddbjsts2.seq;
ddbjsts3.seq; /db/DDBJNEW.DATA/b/new_ddbjsts.seq; ddbjsyn.seq;
/db/DDBJNEW.DATA/b/new_ddbjsyn.seq; est_atha1.seq; est_btra1.seq;
/db/DDBJNEW.DATA/b/new_est_btra1.seq; est_cele1.seq; est_crei1.seq;
est_cint1.seq; est_drer1.seq; /db/DDBJNEW.DATA/b/new_est_drer1.seq;
est_dmel1.seq; /db/DDBJNEW.DATA/b/new_est_dmel1.seq; est_ggal1.seq;
/db/DDBJNEW.DATA/b/new_est_ggal1.seq; est_gmax1.seq; est_hum1.seq;
est_hum2.seq; est_hum3.seq; est_hum4.seq;
/db/DDBJNEW.DATA/b/new_est_hum1.seq; est_hvul1.seq;
/db/DDBJNEW.DATA/b/new_est_hvul1.seq; est_lesc1.seq; est_mous1.seq;
est_mous2.seq; est_mous3.seq; /db/DDBJNEW.DATA/b/new_est_mous1.seq;
est_mtru1.seq; est_osat1.seq; /db/DDBJNEW.DATA/b/new_est_osat1.seq;
est_rnor1.seq; /db/DDBJNEW.DATA/b/new_est_rnor1.seq; est_stro1.seq;
est_taes1.seq; est_xlae1.seq; /db/DDBJNEW.DATA/b/new_est_xlae1.seq;
est_zmay1.seq; /db/DDBJNEW.DATA/b/new_est_zmay1.seq; est_rest1.seq;
est_rest2.seq; est_rest3.seq; /db/DDBJNEW.DATA/b/new_est_rest1.seq
33,031,063 sequences; U,844,286,308 total letters
Searching....................................................done
Score E
Sequences producing significant alignments: (bits) Value N
AL929351|AL929351.1 Plasmodium falciparum strain 3D7, chromo... 34 0.012 13
BE858201|BE858201.1 7g19d02.x1 NCI_CGAP_Brn23 Homo sapiens c... 52 0.015 1
BH148338|BH148338.1 ENTPI92TF Entamoeba histolytica Sheared ... 46 0.016 2
AC140323|AC140323.1 Mus musculus chromosome UNK clone RP24-3... 38 0.033 9
BI504534|BI504534.1 BB170004B20D05.5 Bee Brain Normalized/Su... 38 0.046 2
BX322647|BX322647.10 Zebrafish DNA sequence *** SEQUENCING I... 36 0.049 12
AX602201|AX602201.1 Sequence 130 from Patent WO02092818. 38 0.12 8
BU904505|BU904505.1 AGENCOURT_10155025 NICHD_XGC_Kid1 Xenopu... 38 0.23 2
AG061423|AG061423.1 Pan troglodytes DNA, clone: PTB-049H12.F. 48 0.23 1
AE014852|AE014852.2 Plasmodium falciparum 3D7 chromosome 12,... 36 0.24 9
AC132577|AC132577.2 Mus musculus chromosome UNK clone RP24-4... 34 0.28 6
AC120547|AC120547.7 Mus musculus chromosome 8, clone RP23-24... 32 0.31 10
AC124317|AC124317.1 Homo sapiens chromosome 17 clone CTD-205... 36 0.38 5
AC117242|AC117242.3 Mus musculus BAC clone RP24-151P1 from c... 34 0.46 8
AC115598|AC115598.2 Dictyostelium discoideum chromosome 2 ma... 44 0.48 6
AC104617|AC104617.8 Trypanosoma brucei chromosome V clone RP... 34 0.58 6
AC135162|AC135162.19 Medicago truncatula clone mth2-9b6, WOR... 38 0.58 9
AC129844|AC129844.4 Rattus norvegicus clone CH230-397F3, WOR... 38 0.65 7
AE014832|AE014832.1 Plasmodium falciparum 3D7 chromosome 10 ... 32 0.69 10
AC145485|AC145485.2 Mus musculus chromosome UNK clone RP24-2... 38 0.72 4
AL035476|AL035476.7 Plasmodium falciparum MAL4P3. 32 0.72 11
AC137615|AC137615.2 Genomic sequence for Oryza sativa, Nippo... 38 0.73 4
AL627308|AL627308.20 Human DNA sequence from clone RP11-211A... 32 0.74 8
AC130836|AC130836.4 Mus musculus BAC clone RP24-147P10 from ... 38 0.76 7
AE014109|AE014109.1 Buchnera aphidicola str. Sg (Schizaphis ... 36 0.77 3
AC134185|AC134185.2 Rattus norvegicus clone CH230-119J16, WO... 36 0.85 10
AC108023|AC108023.3 Homo sapiens BAC clone RP11-14P22 from 2... 46 0.92 1
AC132153|AC132153.2 Homo sapiens BAC clone RP11-111G13 from ... 46 0.92 1
AC024283|AC024283.2 Homo sapiens clone RP11-20O4, WORKING DR... 46 0.92 1
AZ534228|AZ534228.1 ENTCC42TF Entamoeba histolytica Sheared ... 46 0.92 1
AC148239|AC148239.6 Medicago truncatula clone mth2-5d7, comp... 46 0.92 1
AC116628|AC116628.4 Homo sapiens BAC clone RP11-369F24 from ... 46 0.92 1
BZ608127|BZ608127.1 WHADX91TF Human MCF7 breast cancer cell ... 46 0.92 1
AC131181|AC131181.1 Homo sapiens chromosome UNK clone RP11-3... 46 0.92 1
AU308185|AU308185.1 Zinnia elegans cDNA, clone:Z18136. 46 0.92 1
CA990760|CA990760.1 EST644268 GESD Medicago truncatula cDNA ... 46 0.92 1
AZ677521|AZ677521.1 ENTJL51TR Entamoeba histolytica Sheared ... 46 0.92 1
BI142917|BI142917.1 rk76b12.y1 Meloidogyne javanica egg pAMP... 46 0.92 1
BH164826|BH164826.1 ENTSH79TR Entamoeba histolytica Sheared ... 46 0.92 1
AC132152|AC132152.3 Homo sapiens BAC clone CTD-2014D7 from 2... 46 0.92 1
AL158155|AL158155.24 Human DNA sequence from clone RP11-397D... 46 0.92 1
AQ321835|AQ321835.1 RPCI11-111G13.TV RPCI-11 Homo sapiens ge... 46 0.92 1
AC093893|AC093893.2 Homo sapiens BAC clone RP11-707F2 from 4... 34 1.1 8
BX569785|BX569785.3 Zebrafish DNA sequence *** SEQUENCING IN... 34 1.1 8
AC107692|AC107692.5 Mus musculus chromosome 3 clone RP24-387... 38 1.2 8
U23529|U23529.1 Caenorhabditis elegans cosmid C15B12, comple... 34 1.3 4
AC131720|AC131720.1 Mus musculus chromosome UNK clone RP23-1... 32 1.3 10
AZ684482|AZ684482.1 ENTKJ68TF Entamoeba histolytica Sheared ... 34 1.4 3
AC128255|AC128255.2 Rattus norvegicus clone CH230-42J13, ***... 34 1.4 8
AE014831|AE014831.1 Plasmodium falciparum 3D7 chromosome 10 ... 30 1.5 10
AC098606|AC098606.6 Rattus norvegicus clone CH230-146J12, WO... 36 1.6 6
AC132420|AC132420.3 Mus musculus chromosome UNK clone RP23-2... 30 1.6 9
BX936425|BX936425.4 Zebrafish DNA sequence *** SEQUENCING IN... 36 1.7 9
AX954529|AX954529.1 Sequence 1375 from Patent WO03093306. 38 1.7 10
CQ655069|CQ655069.1 Sequence 12026 from Patent WO0234771. 38 1.7 10
AE001775|AE001775.1 Thermotoga maritima section 87 of 136 of... 36 1.8 3
AL121883|AL121883.17 Human DNA sequence from clone RP4-545K1... 34 1.9 2
AC145270|AC145270.3 Mus musculus BAC clone RP24-97H23 from c... 36 1.9 6
AC140022|AC140022.10 Medicago truncatula clone mth2-11g20, c... 42 2.1 5
AL928822|AL928822.6 Mouse DNA sequence from clone RP23-419O2... 30 2.1 10
AC136769|AC136769.3 Homo sapiens chromosome 11 clone RP13-43... 38 2.1 4
AL646001|AL646001.7 Mouse DNA sequence from clone RP23-10B17... 34 2.3 10
AC134579|AC134579.5 Mus musculus BAC clone RP24-82I10 from c... 32 2.3 8
CB558579|CB558579.1 AGENCOURT_13054453 NICHD_XGC_Kid1 Xenopu... 34 2.9 2
AC079880|AC079880.6 Homo sapiens BAC clone RP11-453E17 from ... 30 2.9 7
AC116960|AC116960.2 Dictyostelium discoideum chromosome 2 ma... 36 3.1 11
AC144819|AC144819.2 Mus musculus chromosome UNK clone RP23-1... 34 3.1 8
AC103615|AC103615.8 Mus musculus chromosome 5, clone RP24-17... 30 3.3 9
AE014232|AE014232.1 Streptococcus agalactiae 2603V/R section... 38 3.4 4
AC141116|AC141116.2 Rattus norvegicus clone CH230-120L23, WO... 34 3.5 7
AL049557|AL049557.19 Human DNA sequence from clone RP4-773A1... 44 3.6 1
BX465857|BX465857.2 Zebrafish DNA sequence *** SEQUENCING IN... 44 3.6 1
AC115339|AC115339.6 Rattus norvegicus clone CH230-248H13, **... 44 3.6 1
AP003714|AP003714.2 Oryza sativa (japonica cultivar-group) g... 44 3.6 1
AL582159|AL582159.1 human full-length cDNA 3-PRIME end of cl... 44 3.6 1
BX136284|BX136284.1 Danio rerio genomic clone DKEY-97L16, ge... 44 3.6 1
BF109761|BF109761.1 7l68f03.x1 Soares_NSF_F8_9W_OT_PA_P_S1 H... 44 3.6 1
AI203023|AI203023.1 qr33c10.x1 NCI_CGAP_GC6 Homo sapiens cDN... 44 3.6 1
CR293378|CR293378.1 Oryza sativa cDNA clone:y826h03p5. 44 3.6 1
BE552268|BE552268.1 hy05c09.x1 NCI_CGAP_GC6 Homo sapiens cDN... 44 3.6 1
AI831293|AI831293.1 wj82a03.x1 NCI_CGAP_Lym12 Homo sapiens c... 44 3.6 1
CA446483|CA446483.1 UI-H-ED1-axr-d-07-0-UI.s1 NCI_CGAP_ED1 H... 44 3.6 1
AI467963|AI467963.1 tj79b05.x1 Soares_NSF_F8_9W_OT_PA_P_S1 H... 44 3.6 1
BQ005336|BQ005336.1 UI-H-EI1-azg-p-18-0-UI.s1 NCI_CGAP_EI1 H... 44 3.6 1
AA437386|AA437386.1 zw25g10.s1 Soares ovary tumor NbHOT Homo... 44 3.6 1
BM979942|BM979942.1 UI-CF-EN1-adc-o-18-0-UI.s1 UI-CF-EN1 Hom... 44 3.6 1
CQ727188|CQ727188.1 Sequence 13122 from Patent WO02068579. 44 3.6 1
CQ462176|CQ462176.1 Sequence 4954 from Patent WO0192581. 44 3.6 1
AI191249|AI191249.1 qe31h07.s1 Soares_fetal_lung_NbHL19W Hom... 44 3.6 1
AI092327|AI092327.1 qa79a02.x1 Soares_fetal_heart_NbHH19W Ho... 44 3.6 1
CG103924|CG103924.1 PUFST06TB ZM_0.6_1.0_KB Zea mays genomic... 44 3.6 1
CQ728919|CQ728919.1 Sequence 14853 from Patent WO02068579. 44 3.6 1
CD995834|CD995834.1 QBB5c07.yg QBB Zea mays cDNA clone QBB5c... 44 3.6 1
BF222955|BF222955.1 7q25e09.x1 NCI_CGAP_GC6 Homo sapiens cDN... 44 3.6 1
AW000894|AW000894.1 wr90b01.x1 NCI_CGAP_Kid11 Homo sapiens c... 44 3.6 1
AI828851|AI828851.1 ts81g02.x1 NCI_CGAP_GC6 Homo sapiens cDN... 44 3.6 1
AI221256|AI221256.1 qg91e07.x1 Soares_NFL_T_GBC_S1 Homo sapi... 44 3.6 1
BM083481|BM083481.1 imageqc_6_2000/sjp114bdff41.x1 Soares_NS... 44 3.6 1
AC133934|AC133934.1 Mus musculus chromosome UNK clone RP24-3... 44 3.6 1
AF155803|AF155803.1 Homo sapiens DEAD-box corepressor DP103 ... 44 3.6 1
>AL929351|AL929351.1 Plasmodium falciparum strain 3D7, chromosome 5,
segment 1/4.
Length = 347050
Score = 34.2 bits (17), Expect(13) = 0.012
Identities = 17/17 (100%)
Strand = Plus / Plus
Query: 526 ttgaagataaagaagat 542
|||||||||||||||||
Sbjct: 132692 ttgaagataaagaagat 132708
Score = 32.2 bits (16), Expect(13) = 0.012
Identities = 16/16 (100%)
Strand = Plus / Minus
Query: 172 ataaagaagataagaa 187
||||||||||||||||
Sbjct: 249938 ataaagaagataagaa 249923
Score = 32.2 bits (16), Expect(13) = 0.012
Identities = 16/16 (100%)
Strand = Plus / Minus
Query: 532 ataaagaagataagaa 547
||||||||||||||||
Sbjct: 249860 ataaagaagataagaa 249845
Score = 28.2 bits (14), Expect(13) = 0.012
Identities = 14/14 (100%)
Strand = Plus / Plus
Query: 200 attatgtttaaaat 213
||||||||||||||
Sbjct: 82639 attatgtttaaaat 82652
Score = 28.2 bits (14), Expect(13) = 0.012
Identities = 14/14 (100%)
Strand = Plus / Plus
Query: 447 atttcatcaaaatt 460
||||||||||||||
Sbjct: 102485 atttcatcaaaatt 102498
Score = 28.2 bits (14), Expect(13) = 0.012
Identities = 14/14 (100%)
Strand = Plus / Plus
Query: 550 tattacataaacaa 563
||||||||||||||
Sbjct: 142618 tattacataaacaa 142631
Score = 28.2 bits (14), Expect(13) = 0.012
Identities = 14/14 (100%)
Strand = Plus / Plus
Query: 107 aactcaagaaaaat 120
||||||||||||||
Sbjct: 77244 aactcaagaaaaat 77257
Score = 28.2 bits (14), Expect(13) = 0.012
Identities = 14/14 (100%)
Strand = Plus / Plus
Query: 424 aaaagaaagaaaca 437
||||||||||||||
Sbjct: 99720 aaaagaaagaaaca 99733
Score = 28.2 bits (14), Expect(13) = 0.012
Identities = 14/14 (100%)
Strand = Plus / Minus
Query: 82 aatacaaaatggta 95
||||||||||||||
Sbjct: 318164 aatacaaaatggta 318151
Score = 26.3 bits (13), Expect(13) = 0.012
Identities = 13/13 (100%)
Strand = Plus / Minus
Query: 29 tatatatagataa 41
|||||||||||||
Sbjct: 344868 tatatatagataa 344856
Score = 26.3 bits (13), Expect(13) = 0.012
Identities = 16/17 (94%)
Strand = Plus / Plus
Query: 890 acaatgatgattttgat 906
||||||||||| |||||
Sbjct: 203206 acaatgatgatattgat 203222
Score = 26.3 bits (13), Expect(13) = 0.012
Identities = 13/13 (100%)
Strand = Plus / Plus
Query: 566 tttgaaatgtaca 578
|||||||||||||
Sbjct: 174591 tttgaaatgtaca 174603
Score = 26.3 bits (13), Expect(13) = 0.012
Identities = 13/13 (100%)
Strand = Plus / Plus
Query: 83 atacaaaatggta 95
|||||||||||||
Sbjct: 6480 atacaaaatggta 6492
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Number of Hits to DB: 27,057,096
Number of Sequences: 33031063
Number of extensions: 27057096
Number of successful extensions: 2131186
Number of sequences better than 10.0: 542
length of query: 945
length of database: U,844,286,308
effective HSP length: 22
effective length of query: 923
effective length of database: U,117,602,922
effective search space: 34259547497006
effective search space used: 34259547497006
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 21 (42.1 bits)
[blastall] WARNING: [000.000] Reached max 400 HSPs in BlastSaveCurrentHsp, continuing with this limit
ANTI-DNA BLAST search was processed by blast@nig.ac.jp, National Institute of Genetics, Japan.
Dictyostelium discoideum cDNA Project Home