Homology AFG652 vs DNA
Query= AFG652 (AFG652Q) /CSM/AF/AFG6-C/AFG652Q.Seq.d/
(670 letters)
Database: ddbjhum1.seq; ddbjhum10.seq; ddbjhum11.seq; ddbjhum12.seq;
ddbjhum13.seq; ddbjhum14.seq; ddbjhum15.seq; ddbjhum16.seq;
ddbjhum17.seq; ddbjhum18.seq; ddbjhum19.seq; ddbjhum2.seq;
ddbjhum20.seq; ddbjhum21.seq; ddbjhum22.seq; ddbjhum23.seq;
ddbjhum24.seq; ddbjhum3.seq; ddbjhum4.seq; ddbjhum5.seq; ddbjhum6.seq;
ddbjhum7.seq; ddbjhum8.seq; ddbjhum9.seq;
/db/DDBJNEW.DATA/b/new_ddbjhum.seq; ddbjpri.seq;
/db/DDBJNEW.DATA/b/new_ddbjpri.seq; ddbjrod1.seq; ddbjrod10.seq;
ddbjrod2.seq; ddbjrod3.seq; ddbjrod4.seq; ddbjrod5.seq; ddbjrod6.seq;
ddbjrod7.seq; ddbjrod8.seq; ddbjrod9.seq;
/db/DDBJNEW.DATA/b/new_ddbjrod.seq; ddbjmam.seq;
/db/DDBJNEW.DATA/b/new_ddbjmam.seq; ddbjvrt1.seq; ddbjvrt2.seq;
ddbjvrt3.seq; ddbjvrt4.seq; /db/DDBJNEW.DATA/b/new_ddbjvrt.seq;
ddbjinv1.seq; ddbjinv2.seq; ddbjinv3.seq; ddbjinv4.seq; ddbjinv5.seq;
ddbjinv6.seq; /db/DDBJNEW.DATA/b/new_ddbjinv.seq; ddbjpln1.seq;
ddbjpln2.seq; ddbjpln3.seq; ddbjpln4.seq; ddbjpln5.seq; ddbjpln6.seq;
ddbjpln7.seq; ddbjpln8.seq; ddbjpln9.seq;
/db/DDBJNEW.DATA/b/new_ddbjpln.seq; ddbjbct1.seq; ddbjbct2.seq;
ddbjbct3.seq; ddbjbct4.seq; ddbjbct5.seq; ddbjbct6.seq; ddbjbct7.seq;
/db/DDBJNEW.DATA/b/new_ddbjbct.seq; ddbjvrl1.seq; ddbjvrl2.seq;
ddbjvrl3.seq; /db/DDBJNEW.DATA/b/new_ddbjvrl.seq; ddbjphg.seq;
/db/DDBJNEW.DATA/b/new_ddbjphg.seq; ddbjuna.seq;
/db/DDBJNEW.DATA/b/new_ddbjuna.seq; ddbjgss1.seq; ddbjgss10.seq;
ddbjgss11.seq; ddbjgss12.seq; ddbjgss13.seq; ddbjgss14.seq;
ddbjgss15.seq; ddbjgss16.seq; ddbjgss17.seq; ddbjgss18.seq;
ddbjgss19.seq; ddbjgss2.seq; ddbjgss20.seq; ddbjgss21.seq;
ddbjgss22.seq; ddbjgss23.seq; ddbjgss24.seq; ddbjgss25.seq;
ddbjgss26.seq; ddbjgss27.seq; ddbjgss28.seq; ddbjgss29.seq;
ddbjgss3.seq; ddbjgss30.seq; ddbjgss31.seq; ddbjgss32.seq;
ddbjgss33.seq; ddbjgss34.seq; ddbjgss35.seq; ddbjgss36.seq;
ddbjgss37.seq; ddbjgss38.seq; ddbjgss39.seq; ddbjgss4.seq;
ddbjgss40.seq; ddbjgss41.seq; ddbjgss42.seq; ddbjgss43.seq;
ddbjgss44.seq; ddbjgss45.seq; ddbjgss46.seq; ddbjgss47.seq;
ddbjgss48.seq; ddbjgss49.seq; ddbjgss5.seq; ddbjgss50.seq;
ddbjgss51.seq; ddbjgss52.seq; ddbjgss53.seq; ddbjgss54.seq;
ddbjgss55.seq; ddbjgss56.seq; ddbjgss57.seq; ddbjgss58.seq;
ddbjgss59.seq; ddbjgss6.seq; ddbjgss60.seq; ddbjgss61.seq;
ddbjgss62.seq; ddbjgss63.seq; ddbjgss64.seq; ddbjgss65.seq;
ddbjgss66.seq; ddbjgss67.seq; ddbjgss68.seq; ddbjgss69.seq;
ddbjgss7.seq; ddbjgss70.seq; ddbjgss71.seq; ddbjgss72.seq;
ddbjgss73.seq; ddbjgss74.seq; ddbjgss75.seq; ddbjgss76.seq;
ddbjgss77.seq; ddbjgss78.seq; ddbjgss79.seq; ddbjgss8.seq;
ddbjgss80.seq; ddbjgss9.seq; /db/DDBJNEW.DATA/b/new_ddbjgss1.seq;
ddbjhtg1.seq; ddbjhtg10.seq; ddbjhtg11.seq; ddbjhtg12.seq;
ddbjhtg13.seq; ddbjhtg14.seq; ddbjhtg15.seq; ddbjhtg16.seq;
ddbjhtg17.seq; ddbjhtg18.seq; ddbjhtg19.seq; ddbjhtg21.seq;
ddbjhtg22.seq; ddbjhtg23.seq; ddbjhtg24.seq; ddbjhtg25.seq;
ddbjhtg26.seq; ddbjhtg27.seq; ddbjhtg28.seq; ddbjhtg29.seq;
ddbjhtg3.seq; ddbjhtg30.seq; ddbjhtg31.seq; ddbjhtg32.seq;
ddbjhtg33.seq; ddbjhtg34.seq; ddbjhtg35.seq; ddbjhtg36.seq;
ddbjhtg37.seq; ddbjhtg38.seq; ddbjhtg39.seq; ddbjhtg4.seq;
ddbjhtg40.seq; ddbjhtg41.seq; ddbjhtg42.seq; ddbjhtg43.seq;
ddbjhtg44.seq; ddbjhtg45.seq; ddbjhtg46.seq; ddbjhtg47.seq;
ddbjhtg48.seq; ddbjhtg49.seq; ddbjhtg5.seq; ddbjhtg50.seq;
ddbjhtg51.seq; ddbjhtg52.seq; ddbjhtg6.seq; ddbjhtg7.seq;
ddbjhtg8.seq; ddbjhtg9.seq; /db/DDBJNEW.DATA/b/new_ddbjhtg1.seq;
ddbjpat1.seq; ddbjpat10.seq; ddbjpat2.seq; ddbjpat3.seq; ddbjpat4.seq;
ddbjpat5.seq; ddbjpat6.seq; ddbjpat7.seq; ddbjpat8.seq; ddbjpat9.seq;
/db/DDBJNEW.DATA/b/new_ddbjpat.seq; ddbjsts1.seq; ddbjsts2.seq;
ddbjsts3.seq; /db/DDBJNEW.DATA/b/new_ddbjsts.seq; ddbjsyn.seq;
/db/DDBJNEW.DATA/b/new_ddbjsyn.seq; est_atha1.seq; est_btra1.seq;
/db/DDBJNEW.DATA/b/new_est_btra1.seq; est_cele1.seq; est_crei1.seq;
est_cint1.seq; est_drer1.seq; /db/DDBJNEW.DATA/b/new_est_drer1.seq;
est_dmel1.seq; /db/DDBJNEW.DATA/b/new_est_dmel1.seq; est_ggal1.seq;
/db/DDBJNEW.DATA/b/new_est_ggal1.seq; est_gmax1.seq; est_hum1.seq;
est_hum2.seq; est_hum3.seq; est_hum4.seq;
/db/DDBJNEW.DATA/b/new_est_hum1.seq; est_hvul1.seq;
/db/DDBJNEW.DATA/b/new_est_hvul1.seq; est_lesc1.seq; est_mous1.seq;
est_mous2.seq; est_mous3.seq; /db/DDBJNEW.DATA/b/new_est_mous1.seq;
est_mtru1.seq; est_osat1.seq; /db/DDBJNEW.DATA/b/new_est_osat1.seq;
est_rnor1.seq; /db/DDBJNEW.DATA/b/new_est_rnor1.seq; est_stro1.seq;
est_taes1.seq; est_xlae1.seq; /db/DDBJNEW.DATA/b/new_est_xlae1.seq;
est_zmay1.seq; /db/DDBJNEW.DATA/b/new_est_zmay1.seq; est_rest1.seq;
est_rest2.seq; est_rest3.seq; /db/DDBJNEW.DATA/b/new_est_rest1.seq
33,031,063 sequences; U,844,286,308 total letters
Searching....................................................done
Score E
Sequences producing significant alignments: (bits) Value N
AL669858|AL669858.8 Mouse DNA sequence from clone RP23-51G7 ... 50 0.041 1
AC116984|AC116984.2 Dictyostelium discoideum chromosome 2 ma... 36 0.049 12
AC102367|AC102367.19 Mus musculus chromosome 3 clone RP23-21... 42 0.16 4
AC125190|AC125190.2 Mus musculus chromosome UNK clone RP23-2... 42 0.18 3
AF046872|AF046872.1 Candida albicans Cu,Zn-superoxide dismut... 38 0.19 2
AC133233|AC133233.3 Rattus norvegicus clone CH230-29P18, WOR... 38 0.21 4
AC103130|AC103130.5 Rattus norvegicus clone CH230-215F13, WO... 38 0.21 4
AC023290|AC023290.6 Homo sapiens clone RP11-13P8, WORKING DR... 38 0.58 2
AC138017|AC138017.15 Medicago truncatula clone mth2-6i3, com... 46 0.64 1
AC146940|AC146940.14 Medicago truncatula clone mth2-132l6, W... 46 0.64 1
BU722666|BU722666.1 SJMAKG01 SJM Schistosoma japonicum cDNA ... 46 0.64 1
BU724417|BU724417.1 SJMBGH11 SJM Schistosoma japonicum cDNA ... 46 0.64 1
BU794891|BU794891.1 SJF2DIE07 SJF Schistosoma japonicum cDNA... 46 0.64 1
AC103906|AC103906.2 Canis familiaris clone RP81-27O22, WORKI... 40 0.85 2
AC117210|AC117210.3 Mus musculus BAC clone RP23-286E20 from ... 34 1.4 6
AC020959|AC020959.2 Mus musculus clone CT7-187C20, WORKING D... 36 1.5 6
AC103613|AC103613.7 Mus musculus chromosome 14, clone RP24-7... 34 1.8 6
AC113004|AC113004.13 Mus musculus chromosome 5, clone RP23-2... 34 2.1 6
AC102197|AC102197.2 Mus musculus clone RP24-466J11, WORKING ... 32 2.3 8
AB016609|AB016609.1 Dictyostelium discoideum gene for gp138,... 44 2.5 1
AU163824|AU163824.1 Oryza sativa (japonica cultivar-group) c... 44 2.5 1
CK603895|CK603895.1 AGENCOURT_17890824 NIH_MGC_238 Rattus no... 44 2.5 1
AC091866|AC091866.2 Homo sapiens chromosome 5 clone CTD-2360... 44 2.5 1
C19858|C19858.1 Oryza sativa (japonica cultivar-group) cDNA,... 44 2.5 1
BX248233|BX248233.7 Zebrafish DNA sequence from clone CH211-... 36 2.6 4
AC125268|AC125268.9 Mus musculus chromosome 1 clone RP23-127... 32 2.7 8
AC131328|AC131328.4 Mus musculus clone RP23-471C19, WORKING ... 34 2.7 5
AC102803|AC102803.3 Homo sapiens chromosome 18, clone RP11-4... 34 2.7 6
AC107671|AC107671.3 Mus musculus chromosome 7 clone RP23-112... 32 2.8 7
BX000351|BX000351.17 Mouse DNA sequence from clone RP23-313I... 36 2.9 6
BX649348|BX649348.8 Mouse DNA sequence from clone RP23-359M2... 42 3.3 2
AE008685|AE008685.1 Mus musculus T-cell receptor alpha/delta... 42 3.3 5
AC104902|AC104902.3 Mus musculus clone RP24-421K17, LOW-PASS... 34 3.6 4
AC134333|AC134333.1 Mus musculus chromosome UNK clone RP24-1... 34 3.9 5
AC115906|AC115906.5 Mus musculus chromosome 8 clone RP24-476... 34 4.0 5
AL671782|AL671782.5 Mouse DNA sequence from clone RP23-102I3... 32 4.2 4
AE017015|AE017015.1 Bacillus cereus ATCC 14579 section 18 of... 32 5.0 8
AC124744|AC124744.1 Mus musculus chromosome UNK clone RP23-2... 42 5.2 4
AC117262|AC117262.2 Mus musculus BAC clone RP24-537M7 from 2... 34 5.4 5
AC111046|AC111046.27 Mus musculus chromosome 10 clone RP23-4... 32 5.8 8
BX324176|BX324176.11 Mouse DNA sequence from clone RP23-136N... 32 5.8 6
AE014821|AE014821.1 Plasmodium falciparum 3D7 chromosome 14 ... 32 6.5 10
AL929151|AL929151.5 Zebrafish DNA sequence from clone CH211-... 38 7.5 5
AC139226|AC139226.5 Mus musculus chromosome 10 clone RP24-36... 36 7.7 5
AC132270|AC132270.2 Mus musculus chromosome UNK clone RP24-3... 36 7.9 6
AC133949|AC133949.2 Mus musculus chromosome UNK clone RP24-2... 36 8.6 3
AL645543|AL645543.13 Mouse DNA sequence from clone RP23-204P... 32 9.4 5
AC132215|AC132215.1 Genomic sequence for Oryza sativa, Nippo... 42 10 1
AC005162|AC005162.1 Homo sapiens BAC clone CTB-113D17 from 7... 42 10 1
AC114419|AC114419.2 Mus musculus clone RP23-371K2, WORKING D... 42 10 1
AC098813|AC098813.1 Papio anubis clone RP41-479E1, WORKING D... 42 10 1
AC073655|AC073655.26 Homo sapiens 12 BAC RP11-1105G2 (Roswel... 42 10 1
AC026207|AC026207.2 Homo sapiens chromosome 3 clone RP11-659... 42 10 1
CD855577|CD855577.1 DH0AMM9ZF06ZZM1 HaDevR6 Helianthus annuu... 42 10 1
CD855507|CD855507.1 DH0AMM8ZD06ZZM1 HaDevR6 Helianthus annuu... 42 10 1
D41376|D41376.1 Oryza sativa (japonica cultivar-group) cDNA,... 42 10 1
CF313905|CF313905.1 HD--02-D16.b1 OsHDAC1-overexpressing tra... 42 10 1
CF297467|CF297467.1 30DGS--08-F14.g1 Rice leaf plasmid cDNA ... 42 10 1
CB678727|CB678727.1 OSJNEf01D21.r OSJNEf Oryza sativa (japon... 42 10 1
CK540123|CK540123.1 rswhb0_003428.y1 swh Bombyx mori cDNA, m... 42 10 1
CF301692|CF301692.1 7LEAF--06-K11.b1 Rice leaf plasmid cDNA ... 42 10 1
BI892454|BI892454.1 OsEST00007 Rice young panicles Oryza sat... 42 10 1
CD414230|CD414230.1 Gm_ck46276 Soybean induced by Salicylic ... 42 10 1
CK542478|CK542478.1 rswhb0_006974.y1 swh Bombyx mori cDNA, m... 42 10 1
BU011242|BU011242.1 QGJ15K21.yg.ab1 QG_EFGHJ lettuce serriol... 42 10 1
CL090353|CL090353.1 ISB1-15H2_T7.1 ISB1 Xenopus tropicalis g... 42 10 1
AZ008053|AZ008053.1 RPCI-23-389J15.TJ RPCI-23 Mus musculus g... 42 10 1
CK492282|CK492282.1 rswab0_011095.y1 swa Bombyx mori cDNA, m... 42 10 1
CF296572|CF296572.1 30DGS--06-P23.b1 Rice leaf plasmid cDNA ... 42 10 1
BU006357|BU006357.1 QGH10N02.yg.ab1 QG_EFGHJ lettuce serriol... 42 10 1
AU064949|AU064949.1 Oryza sativa (japonica cultivar-group) c... 42 10 1
AW508695|AW508695.1 si35c10.y1 Gm-r1030 Glycine max cDNA clo... 42 10 1
BQ847677|BQ847677.1 QGA5A11.yg.ab1 QG_ABCDI lettuce salinas ... 42 10 1
BE228886|BE228886.1 98AS3243 Rice Immature Seed Lambda ZAPII... 42 10 1
AU094288|AU094288.1 Oryza sativa (japonica cultivar-group) c... 42 10 1
C73250|C73250.1 Oryza sativa (japonica cultivar-group) cDNA,... 42 10 1
BY763005|BY763005.1 Mus musculus 2 days neonate thymus thymi... 42 10 1
AE008684|AE008684.1 Mus musculus T-cell receptor alpha/delta... 42 10 1
D22909|D22909.1 Oryza sativa (japonica cultivar-group) cDNA,... 42 10 1
D15875|D15875.1 Oryza sativa (japonica cultivar-group) cDNA,... 42 10 1
CF331954|CF331954.1 NACL--08-E09.g1 Rice callus plasmid cDNA... 42 10 1
CF296654|CF296654.1 30DGS--07-C03.b1 Rice leaf plasmid cDNA ... 42 10 1
CB678725|CB678725.1 OSJNEf01D20.r OSJNEf Oryza sativa (japon... 42 10 1
BF325057|BF325057.1 su30b05.y1 Gm-c1068 Glycine max cDNA clo... 42 10 1
BE823633|BE823633.1 GM700021A20E9 Gm-r1070 Glycine max cDNA ... 42 10 1
CD412753|CD412753.1 Gm_ck43928 Soybean induced by Salicylic ... 42 10 1
CK490322|CK490322.1 rswab0_008338.y1 swa Bombyx mori cDNA, m... 42 10 1
CK487093|CK487093.1 rswab0_004158.y1 swa Bombyx mori cDNA, m... 42 10 1
BQ991182|BQ991182.1 QGF22C21.yg.ab1 QG_EFGHJ lettuce serriol... 42 10 1
D49171|D49171.1 Oryza sativa (japonica cultivar-group) cDNA,... 42 10 1
D38914|D38914.1 Oryza sativa (japonica cultivar-group) cDNA,... 42 10 1
C73710|C73710.1 Oryza sativa (japonica cultivar-group) cDNA,... 42 10 1
AC135257|AC135257.1 Genomic sequence for Oryza sativa, Nippo... 42 10 1
BP179213|BP179213.1 Bombyx mori cDNA, clone: maV32455. 42 10 1
CR290287|CR290287.1 Oryza sativa cDNA clone:y844d02p5. 42 10 1
AU093712|AU093712.1 Oryza sativa (japonica cultivar-group) c... 42 10 1
AU058238|AU058238.1 Oryza sativa (japonica cultivar-group) c... 42 10 1
D39209|D39209.1 Oryza sativa (japonica cultivar-group) cDNA,... 42 10 1
CF321285|CF321285.1 HD--12-H21.b1 OsHDAC1-overexpressing tra... 42 10 1
CF295589|CF295589.1 30DGS--05-J16.g1 Rice leaf plasmid cDNA ... 42 10 1
>AL669858|AL669858.8 Mouse DNA sequence from clone RP23-51G7 on chromosome
11.
Length = 240514
Score = 50.1 bits (25), Expect = 0.041
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 560 atcttctttaatttctgttattttaattt 588
|||||||||||||||||||| ||||||||
Sbjct: 205501 atcttctttaatttctgttagtttaattt 205473
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Number of Hits to DB: 12,380,847
Number of Sequences: 33031063
Number of extensions: 12380847
Number of successful extensions: 1060041
Number of sequences better than 10.0: 304
length of query: 670
length of database: U,844,286,308
effective HSP length: 22
effective length of query: 648
effective length of database: U,117,602,922
effective search space: 24052206693456
effective search space used: 24052206693456
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 21 (42.1 bits)
[blastall] WARNING: [000.000] Reached max 400 HSPs in BlastSaveCurrentHsp, continuing with this limit
ANTI-DNA BLAST search was processed by blast@nig.ac.jp, National Institute of Genetics, Japan.
Dictyostelium discoideum cDNA Project Home