Homology AFF664 vs DNA
Query= AFF664 (AFF664Q) /CSM/AF/AFF6-C/AFF664Q.Seq.d/
(753 letters)
Database: ddbjhum1.seq; ddbjhum10.seq; ddbjhum11.seq; ddbjhum12.seq;
ddbjhum13.seq; ddbjhum14.seq; ddbjhum15.seq; ddbjhum16.seq;
ddbjhum17.seq; ddbjhum18.seq; ddbjhum19.seq; ddbjhum2.seq;
ddbjhum20.seq; ddbjhum21.seq; ddbjhum22.seq; ddbjhum23.seq;
ddbjhum24.seq; ddbjhum3.seq; ddbjhum4.seq; ddbjhum5.seq; ddbjhum6.seq;
ddbjhum7.seq; ddbjhum8.seq; ddbjhum9.seq;
/db/DDBJNEW.DATA/a/new_ddbjhum.seq; ddbjpri.seq;
/db/DDBJNEW.DATA/a/new_ddbjpri.seq; ddbjrod1.seq; ddbjrod10.seq;
ddbjrod2.seq; ddbjrod3.seq; ddbjrod4.seq; ddbjrod5.seq; ddbjrod6.seq;
ddbjrod7.seq; ddbjrod8.seq; ddbjrod9.seq;
/db/DDBJNEW.DATA/a/new_ddbjrod.seq; ddbjmam.seq;
/db/DDBJNEW.DATA/a/new_ddbjmam.seq; ddbjvrt1.seq; ddbjvrt2.seq;
ddbjvrt3.seq; ddbjvrt4.seq; /db/DDBJNEW.DATA/a/new_ddbjvrt.seq;
ddbjinv1.seq; ddbjinv2.seq; ddbjinv3.seq; ddbjinv4.seq; ddbjinv5.seq;
ddbjinv6.seq; /db/DDBJNEW.DATA/a/new_ddbjinv.seq; ddbjpln1.seq;
ddbjpln2.seq; ddbjpln3.seq; ddbjpln4.seq; ddbjpln5.seq; ddbjpln6.seq;
ddbjpln7.seq; ddbjpln8.seq; ddbjpln9.seq;
/db/DDBJNEW.DATA/a/new_ddbjpln.seq; ddbjbct1.seq; ddbjbct2.seq;
ddbjbct3.seq; ddbjbct4.seq; ddbjbct5.seq; ddbjbct6.seq; ddbjbct7.seq;
/db/DDBJNEW.DATA/a/new_ddbjbct.seq; ddbjvrl1.seq; ddbjvrl2.seq;
ddbjvrl3.seq; /db/DDBJNEW.DATA/a/new_ddbjvrl.seq; ddbjphg.seq;
/db/DDBJNEW.DATA/a/new_ddbjphg.seq; ddbjuna.seq;
/db/DDBJNEW.DATA/a/new_ddbjuna.seq; ddbjgss1.seq; ddbjgss10.seq;
ddbjgss11.seq; ddbjgss12.seq; ddbjgss13.seq; ddbjgss14.seq;
ddbjgss15.seq; ddbjgss16.seq; ddbjgss17.seq; ddbjgss18.seq;
ddbjgss19.seq; ddbjgss2.seq; ddbjgss20.seq; ddbjgss21.seq;
ddbjgss22.seq; ddbjgss23.seq; ddbjgss24.seq; ddbjgss25.seq;
ddbjgss26.seq; ddbjgss27.seq; ddbjgss28.seq; ddbjgss29.seq;
ddbjgss3.seq; ddbjgss30.seq; ddbjgss31.seq; ddbjgss32.seq;
ddbjgss33.seq; ddbjgss34.seq; ddbjgss35.seq; ddbjgss36.seq;
ddbjgss37.seq; ddbjgss38.seq; ddbjgss39.seq; ddbjgss4.seq;
ddbjgss40.seq; ddbjgss41.seq; ddbjgss42.seq; ddbjgss43.seq;
ddbjgss44.seq; ddbjgss45.seq; ddbjgss46.seq; ddbjgss47.seq;
ddbjgss48.seq; ddbjgss49.seq; ddbjgss5.seq; ddbjgss50.seq;
ddbjgss51.seq; ddbjgss52.seq; ddbjgss53.seq; ddbjgss54.seq;
ddbjgss55.seq; ddbjgss56.seq; ddbjgss57.seq; ddbjgss58.seq;
ddbjgss59.seq; ddbjgss6.seq; ddbjgss60.seq; ddbjgss61.seq;
ddbjgss62.seq; ddbjgss63.seq; ddbjgss64.seq; ddbjgss65.seq;
ddbjgss66.seq; ddbjgss67.seq; ddbjgss68.seq; ddbjgss69.seq;
ddbjgss7.seq; ddbjgss70.seq; ddbjgss71.seq; ddbjgss72.seq;
ddbjgss73.seq; ddbjgss74.seq; ddbjgss75.seq; ddbjgss76.seq;
ddbjgss77.seq; ddbjgss78.seq; ddbjgss79.seq; ddbjgss8.seq;
ddbjgss80.seq; ddbjgss9.seq; /db/DDBJNEW.DATA/a/new_ddbjgss1.seq;
/db/DDBJNEW.DATA/a/new_ddbjgss2.seq; ddbjhtg1.seq; ddbjhtg10.seq;
ddbjhtg11.seq; ddbjhtg12.seq; ddbjhtg13.seq; ddbjhtg14.seq;
ddbjhtg15.seq; ddbjhtg16.seq; ddbjhtg17.seq; ddbjhtg18.seq;
ddbjhtg19.seq; ddbjhtg2.seq; ddbjhtg20.seq; ddbjhtg21.seq;
ddbjhtg22.seq; ddbjhtg23.seq; ddbjhtg24.seq; ddbjhtg25.seq;
ddbjhtg26.seq; ddbjhtg27.seq; ddbjhtg28.seq; ddbjhtg29.seq;
ddbjhtg3.seq; ddbjhtg30.seq; ddbjhtg31.seq; ddbjhtg32.seq;
ddbjhtg33.seq; ddbjhtg34.seq; ddbjhtg35.seq; ddbjhtg36.seq;
ddbjhtg37.seq; ddbjhtg38.seq; ddbjhtg39.seq; ddbjhtg4.seq;
ddbjhtg40.seq; ddbjhtg41.seq; ddbjhtg42.seq; ddbjhtg43.seq;
ddbjhtg44.seq; ddbjhtg45.seq; ddbjhtg46.seq; ddbjhtg47.seq;
ddbjhtg48.seq; ddbjhtg49.seq; ddbjhtg5.seq; ddbjhtg50.seq;
ddbjhtg51.seq; ddbjhtg52.seq; ddbjhtg6.seq; ddbjhtg7.seq;
ddbjhtg8.seq; ddbjhtg9.seq; /db/DDBJNEW.DATA/a/new_ddbjhtg1.seq;
/db/DDBJNEW.DATA/a/new_ddbjhtg2.seq; ddbjpat1.seq; ddbjpat10.seq;
ddbjpat2.seq; ddbjpat3.seq; ddbjpat4.seq; ddbjpat5.seq; ddbjpat6.seq;
ddbjpat7.seq; ddbjpat8.seq; ddbjpat9.seq;
/db/DDBJNEW.DATA/a/new_ddbjpat.seq; ddbjsts1.seq; ddbjsts2.seq;
ddbjsts3.seq; /db/DDBJNEW.DATA/a/new_ddbjsts.seq; ddbjsyn.seq;
/db/DDBJNEW.DATA/a/new_ddbjsyn.seq; est_atha1.seq;
/db/DDBJNEW.DATA/a/new_est_atha1.seq; est_btra1.seq;
/db/DDBJNEW.DATA/a/new_est_btra1.seq; est_cele1.seq; est_crei1.seq;
est_cint1.seq; est_drer1.seq; /db/DDBJNEW.DATA/a/new_est_drer1.seq;
est_dmel1.seq; /db/DDBJNEW.DATA/a/new_est_dmel1.seq; est_ggal1.seq;
/db/DDBJNEW.DATA/a/new_est_ggal1.seq; est_gmax1.seq;
/db/DDBJNEW.DATA/a/new_est_gmax1.seq; est_hum1.seq; est_hum2.seq;
est_hum3.seq; est_hum4.seq; /db/DDBJNEW.DATA/a/new_est_hum1.seq;
est_hvul1.seq; /db/DDBJNEW.DATA/a/new_est_hvul1.seq; est_lesc1.seq;
est_mous1.seq; est_mous2.seq; est_mous3.seq;
/db/DDBJNEW.DATA/a/new_est_mous1.seq; est_mtru1.seq; est_osat1.seq;
/db/DDBJNEW.DATA/a/new_est_osat1.seq; est_rnor1.seq;
/db/DDBJNEW.DATA/a/new_est_rnor1.seq; est_stro1.seq; est_taes1.seq;
/db/DDBJNEW.DATA/a/new_est_taes1.seq; est_xlae1.seq;
/db/DDBJNEW.DATA/a/new_est_xlae1.seq; est_zmay1.seq;
/db/DDBJNEW.DATA/a/new_est_zmay1.seq; est_rest1.seq; est_rest2.seq;
est_rest3.seq; /db/DDBJNEW.DATA/a/new_est_rest1.seq
33,607,026 sequences; V,796,464,007 total letters
Searching....................................................done
Score E
Sequences producing significant alignments: (bits) Value N
AY160091|AY160091.1 Dictyostelium discoideum nucleotide exch... 1201 0.0 1
AF275723|AF275723.1 Dictyostelium discoideum Ras guanine nuc... 1193 0.0 1
AL844509|AL844509.1 Plasmodium falciparum chromosome 13. 36 4e-10 30
AC116984|AC116984.2 Dictyostelium discoideum chromosome 2 ma... 32 3e-08 20
AC116986|AC116986.2 Dictyostelium discoideum chromosome 2 ma... 36 8e-05 14
AE001438|AE001438.3 Clostridium acetobutylicum megaplasmid p... 38 5e-04 11
AC141343|AC141343.3 Rattus norvegicus clone CH230-217P5, WOR... 42 7e-04 6
AC116957|AC116957.2 Dictyostelium discoideum chromosome 2 ma... 36 0.002 16
AC119354|AC119354.5 Rattus norvegicus clone CH230-414J4, WOR... 36 0.002 6
AC117072|AC117072.3 Dictyostelium discoideum chromosome 2 ma... 32 0.007 12
AC116979|AC116979.3 Dictyostelium discoideum chromosome 2 ma... 30 0.010 16
AC116305|AC116305.2 Dictyostelium discoideum chromosome 2 ma... 30 0.021 17
AL445563|AL445563.1 Mycoplasma pulmonis (strain UAB CTIP) co... 32 0.022 12
AR271569|AR271569.1 Sequence 1 from patent US 6503729. 34 0.040 21
BX842644|BX842644.1 Mycoplasma mycoides subsp. mycoides SC g... 32 0.046 16
AL445564|AL445564.1 Mycoplasma pulmonis (strain UAB CTIP) co... 32 0.051 12
Z81509|Z81509.1 Caenorhabditis elegans cosmid F21A3. 34 0.059 5
AC115604|AC115604.2 Dictyostelium discoideum chromosome 2 ma... 32 0.099 8
AC117075|AC117075.2 Dictyostelium discoideum chromosome 2 ma... 32 0.11 13
AL445565|AL445565.1 Mycoplasma pulmonis (strain UAB CTIP) co... 32 0.15 14
AC132276|AC132276.2 Mus musculus chromosome UNK clone RP24-3... 30 0.15 12
AE014817|AE014817.1 Plasmodium falciparum 3D7 chromosome 14 ... 32 0.17 12
AF295546|AF295546.1 Malawimonas jakobiformis mitochondrial D... 40 0.21 4
AP001708|AP001708.1 Homo sapiens genomic DNA, chromosome 21q... 38 0.23 9
AC090052|AC090052.15 Homo sapiens 12 BAC RP11-295G12 (Roswel... 36 0.27 5
AP003136|AP003136.2 Staphylococcus aureus subsp. aureus N315... 32 0.27 12
BX538350|BX538350.1 Cryptosporidium parvum chromosome 6, com... 30 0.29 13
AC136947|AC136947.1 Homo sapiens chromosome 16 clone RP11-45... 36 0.34 5
AE014837|AE014837.1 Plasmodium falciparum 3D7 chromosome 11 ... 32 0.34 10
AL844506|AL844506.1 Plasmodium falciparum chromosome 7. 32 0.36 24
AC118185|AC118185.5 Rattus norvegicus clone CH230-168G23, **... 34 0.49 9
AF063866|AF063866.1 Melanoplus sanguinipes entomopoxvirus, c... 32 0.55 14
AC115599|AC115599.2 Dictyostelium discoideum chromosome 2 ma... 32 0.55 10
AC131348|AC131348.4 Rattus norvegicus clone CH230-7G14, *** ... 42 0.60 3
AP004174|AP004174.1 Mycoplasma penetrans genomic DNA, comple... 30 0.68 11
AE017199|AE017199.1 Nanoarchaeum equitans Kin4-M, complete g... 38 0.68 9
AP003364|AP003364.3 Staphylococcus aureus subsp. aureus Mu50... 32 0.68 12
AC118144|AC118144.5 Rattus norvegicus clone CH230-120D24, **... 46 0.74 1
AC005140|AC005140.8 Plasmodium falciparum chromosome 12 clon... 46 0.74 1
AE014850|AE014850.1 Plasmodium falciparum 3D7 chromosome 12,... 46 0.74 1
AC005139|AC005139.3 Plasmodium falciparum chromosome 12, ***... 46 0.74 1
AL022594|AL022594.18 Caenorhabditis elegans DNA *** SEQUENCI... 34 0.75 11
AC126143|AC126143.3 Rattus norvegicus clone CH230-169J9, ***... 40 0.92 5
AE014832|AE014832.1 Plasmodium falciparum 3D7 chromosome 10 ... 40 0.96 8
AJ278986|AJ278986.2 Pichia etchellsii plasmid pPE1B. 30 1.0 5
AC114154|AC114154.4 Rattus norvegicus clone CH230-149K22, WO... 36 1.0 7
AC121368|AC121368.4 Rattus norvegicus clone CH230-28C17, WOR... 40 1.1 7
AL139074|AL139074.2 Campylobacter jejuni subsp. jejuni NCTC ... 34 1.1 11
AL929354|AL929354.1 Plasmodium falciparum strain 3D7, chromo... 30 1.2 15
AC100353|AC100353.5 Mus musculus clone RP23-127M12, *** SEQU... 36 1.2 8
U00065|U00065.1 Caenorhabditis elegans cosmid D1044, complet... 38 1.3 5
AC134541|AC134541.4 Mus musculus chromosome UNK clone RP24-4... 34 1.3 9
AL672072|AL672072.18 Zebrafish DNA sequence from clone BUSM1... 38 1.4 4
AL671536|AL671536.8 Mouse DNA sequence from clone RP23-291O1... 32 1.4 2
AC148241|AC148241.11 Medicago truncatula clone mth2-14m21, W... 34 1.5 7
AC125655|AC125655.2 Rattus norvegicus clone CH230-501F12, WO... 34 1.5 5
AC147142|AC147142.2 Mus musculus BAC clone RP24-391G7 from c... 30 1.6 11
AC116100|AC116100.2 Dictyostelium discoideum chromosome 2 ma... 30 1.7 7
AC093986|AC093986.6 Rattus norvegicus clone CH230-58L13, WOR... 36 1.7 6
AC091834|AC091834.2 Homo sapiens chromosome 5 clone CTD-2054... 34 1.7 7
AX833458|AX833458.1 Sequence 582 from Patent EP1347046. 34 1.7 3
AK095218|AK095218.1 Homo sapiens cDNA FLJ37899 fis, clone CD... 34 1.7 3
AL139077|AL139077.2 Campylobacter jejuni subsp. jejuni NCTC ... 44 1.7 9
AP003133|AP003133.2 Staphylococcus aureus subsp. aureus N315... 32 1.7 12
AC006281|AC006281.8 Plasmodium falciparum chromosome 12 clon... 32 1.9 9
AC069522|AC069522.7 Homo sapiens chromosome 3 clone RP11-129... 40 2.0 7
BH153379|BH153379.1 ENTRW37TF Entamoeba histolytica Sheared ... 40 2.1 2
AC114258|AC114258.3 Dictyostelium discoideum chromosome 2 ma... 34 2.1 6
AC111639|AC111639.4 Rattus norvegicus clone CH230-100I8, ***... 34 2.1 5
AC109351|AC109351.3 Homo sapiens BAC clone RP11-417M17 from ... 32 2.1 8
AB063522|AB063522.2 Wigglesworthia glossinidia endosymbiont ... 32 2.4 14
AC008235|AC008235.4 Drosophila melanogaster, chromosome 3R, ... 36 2.4 6
BX548033|BX548033.5 Zebrafish DNA sequence *** SEQUENCING IN... 38 2.5 6
AC004688|AC004688.8 Plasmodium falciparum chromosome 12 clon... 34 2.6 8
AY182005|AY182005.1 Harpochytrium sp. JEL94 mitochondrion, c... 32 2.8 4
AC101689|AC101689.5 Mus musculus chromosome 1 clone RP23-217... 44 2.9 1
CR354550|CR354550.4 Zebrafish DNA sequence *** SEQUENCING IN... 44 2.9 1
BX323577|BX323577.5 Zebrafish DNA sequence *** SEQUENCING IN... 44 2.9 1
BX294113|BX294113.7 Zebrafish DNA sequence from clone DKEYP-... 44 2.9 1
AC123690|AC123690.4 Mus musculus chromosome 1 clone RP23-322... 44 2.9 1
BX950199|BX950199.1 Zebrafish DNA sequence *** SEQUENCING IN... 44 2.9 1
U15295|U15295.1 Campylobacter jejuni isoleucyl-tRNA syntheta... 44 2.9 1
BX571798|BX571798.5 Zebrafish DNA sequence from clone DKEY-1... 44 2.9 1
BH683685|BH683685.1 BOHUQ62TF BO_2_3_KB Brassica oleracea ge... 44 2.9 1
AC140854|AC140854.4 Botryllus schlosseri clone subsf-371a15,... 44 2.9 1
BG809519|BG809519.1 mghe0043xE19f Magnaporthe grisea Appress... 44 2.9 1
BX134121|BX134121.1 Danio rerio genomic clone DKEY-81I11, ge... 44 2.9 1
AC137845|AC137845.9 Mus musculus chromosome 1, clone RP23-43... 44 2.9 1
AL773587|AL773587.10 Mouse DNA sequence from clone RP23-38J2... 36 3.1 7
AL772159|AL772159.12 Mouse DNA sequence from clone RP23-107H... 36 3.2 6
AC126972|AC126972.4 Rattus norvegicus clone CH230-133N10, **... 32 3.2 9
Z81475|Z81475.1 Caenorhabditis elegans cosmid C24H11. 34 3.3 5
AP006628|AP006628.1 Onion yellows phytoplasma OY-M DNA, comp... 30 3.3 16
AL606992|AL606992.3 Oryza sativa genomic DNA, chromosome 4, ... 36 3.4 6
Z22179|Z22179.1 Caenorhabditis elegans cosmid F58A4. 36 3.4 3
AC120643|AC120643.5 Rattus norvegicus clone CH230-520C13, **... 34 3.4 11
AC116982|AC116982.2 Dictyostelium discoideum chromosome 2 ma... 28 3.5 12
AC116963|AC116963.2 Dictyostelium discoideum chromosome 2 ma... 32 3.5 12
BX842642|BX842642.1 Mycoplasma mycoides subsp. mycoides SC g... 30 3.5 13
AC146852|AC146852.14 Medicago truncatula clone mth2-58k21, c... 36 3.5 6
>AY160091|AY160091.1 Dictyostelium discoideum nucleotide exchange
factor RasGEF B (gefB) gene, complete cds.
Length = 6289
Score = 1201 bits (606), Expect = 0.0
Identities = 606/606 (100%)
Strand = Plus / Plus
Query: 1 atcgtgaatataatcatagtcatcaccatttattaagttcaagttcaaataatgtaatga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4132 atcgtgaatataatcatagtcatcaccatttattaagttcaagttcaaataatgtaatga 4191
Query: 61 taaataatagaagtattggtaaatcattttcaactggtaatttctcacaacctcaaccaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4192 taaataatagaagtattggtaaatcattttcaactggtaatttctcacaacctcaaccaa 4251
Query: 121 taatgccttcaaatggtattggtggaagtggtggcggtggattaggtacaacattgagtg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4252 taatgccttcaaatggtattggtggaagtggtggcggtggattaggtacaacattgagtg 4311
Query: 181 ttggtaatggtggtattgttggtggattgcaatcgagatcatcatcattcgaagagaatc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4312 ttggtaatggtggtattgttggtggattgcaatcgagatcatcatcattcgaagagaatc 4371
Query: 241 aattacaatatgcaattgaaagttttatggaggtttacaatcatttaactagtaaagata 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4372 aattacaatatgcaattgaaagttttatggaggtttacaatcatttaactagtaaagata 4431
Query: 301 aagttgatacttctatttggttagaagaagaaaaggaagacataaacgtttactatataa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4432 aagttgatacttctatttggttagaagaagaaaaggaagacataaacgtttactatataa 4491
Query: 361 acaataccaatattgatgataaattctatagatcaattaaatatgcttcgttgaatcaat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4492 acaataccaatattgatgataaattctatagatcaattaaatatgcttcgttgaatcaat 4551
Query: 421 tgattttaaagttaacatgtgaatcaaataccgaattaagattcacaaaaacttttatca 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4552 tgattttaaagttaacatgtgaatcaaataccgaattaagattcacaaaaacttttatca 4611
Query: 481 caacttatagatcatttacaacaggtgatatattcttaatgaaattaattcaacgttatt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4612 caacttatagatcatttacaacaggtgatatattcttaatgaaattaattcaacgttatt 4671
Query: 541 ttacaccaaatctaaagaatattgtaccatatcaatttgttcaaaaaattcaaattccaa 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4672 ttacaccaaatctaaagaatattgtaccatatcaatttgttcaaaaaattcaaattccaa 4731
Query: 601 tacaat 606
||||||
Sbjct: 4732 tacaat 4737
Score = 145 bits (73), Expect = 1e-30
Identities = 87/93 (93%)
Strand = Plus / Plus
Query: 645 tcagtattaggncncctttgtgnattacctcatatgagtgataagaaaaaatttgaagat 704
||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 5748 tcagtattaggtttcctttgtgaattacctcatatgagtgataagaaaaaatttgaagat 5807
Query: 705 gatacttatgaacanccaattttattagaacct 737
|||||||||||||| |||||||||||||||||
Sbjct: 5808 gatacttatgaacaatcaattttattagaacct 5840
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Number of Hits to DB: 20,734,027
Number of Sequences: 33607026
Number of extensions: 20734027
Number of successful extensions: 1752022
Number of sequences better than 10.0: 407
length of query: 753
length of database: V,796,464,007
effective HSP length: 22
effective length of query: 731
effective length of database: V,057,109,435
effective search space: 27819746996985
effective search space used: 27819746996985
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 21 (42.1 bits)
[blastall] WARNING: [000.000] Reached max 400 HSPs in BlastSaveCurrentHsp, continuing with this limit
ANTI-DNA BLAST search was processed by blast@nig.ac.jp, National Institute of Genetics, Japan.
Dictyostelium discoideum cDNA Project Home