Dictyostelium discoideum cDNA Clone AFF626

Sequence AFF626

GTCATAATAA TATTATAAAA TTCAAAGATG TCTAAAGTAG TCCGTAGTAG
TAAATATCGT CATGTTTTTG CAGCACAACC AAAAAAAGAA GAGTGCTATC
AAAACTTAAA AGTTACCAAA TCAGCATGGG ATAGTAATTA CGTTGCAGCC
AACACTAGAT ACTTTGGTGT TATTTGGGAT GCTGCAGGTG GTGGTTCATT
CGCTGTTATT CCACATGAGG CTTCAGGTAA AACCACATCA GTTCCATTAT
TCAATGGTCA TAAGAGTGCA GTTTTAGATA TTGCTTTCCA CCCATTCAAT
GAAAACCTCG TTGGTTCAGT TTCTGAAGAT TGTAACATTT GTATTTGGGG
TATCCCAGAA GGTGGTTTAA CCGACTCAAT CTCAACCCCA CTCCAAACTT
TATCTGGTCA CAAGAGAAAG GTTGGTACCA TCTCATTCAA TCCAGTTGCT
GATAATGTTG CCGCTACCTC ATCTGGTGAT TTCTTAGTTA AAACTTGGGA
TGTTGAACAA GGTAAGAATT TAACCACTGT TGAAGGTCAC TCTGATATGA
TCACTTCATG CGAATGGAAT CACAATGGTA GCCAAATCGT TACCACCTGT
AAAGATAAGA AAGCTCGTGT TTTCGATCCA A--------- -AAGGTGTCA
AAAACAGCAG AGCCATCTTT GCCAAAGATA AGGTTATCAC CGTTGGTTTC
TCAAAGACCT CTGAAAGAGA ACTCCACATT TATGATCCAC GTGCTTTCAC
CACCCCCACT CTCTGCTCAA GTCGTCGATT CTGCCTCTGG TCTCTTAATG
CCATTCTATG ATGCTGACAA TTCAATTTTA TACCTTGCTG GTAAAGGTGA
TGGTAACATC AGATACTACG AATTGGTCGA TGAATCACCA TACATTCATT
TCTTAAGTGA ATTCAAATCT GCCACCCCAC AAAGAGGTCT TTGCTTCTTA
CCAAAGAGAT GTCTCAACAC CTCTGAATGT GAAATCGCTA GAGGTCTCAA
AGTTACTCCA TTCACCGTTG AACCAATCTC ATTCCGTGTA CCAAGAAAAT
CTGATATCTT CCAAGACGAT ATCTACCCAG ATACCTACGC TGGTGAACCA
TCACTCACTG CCGAACAATG GGTTTCAGGT ACCAATGCTG AACCAAAGAC
TGTTAGTTTA GCTGGTGGTT TTGTCAAAAA AGCTTCAGCT GTTGAATTCA
AACCAGTCGT TCAAGTTCAA GAAGGTCCAA AGAATGAAAA AGAACTCCGT
GAAGAATACG AAAAATTAAA GATTCGTGTT GCTTACTTAG AATNCTGAAA
TCGTTAAAAA GGATGCCAAA ATCAAAGAAC TCACCAACTA AATTAATA

Translated Amino Acid Sequence AFF626

viiil*NSKMSKVVRSSKYRHVFAAQPKKEECYQNLKVTKSAWDSNYVAANTRYFGVIWD
AAGGGSFAVIPHEASGKTTSVPLFNGHKSAVLDIAFHPFNENLVGSVSEDCNICIWGIPE
GGLTDSISTPLQTLSGHKRKVGTISFNPVADNVAATSSGDFLVKTWDVEQGKNLTTVEGH
SDMITSCEWNHNGSQIVTTCKDKKARVFDP---

---KVSKTAEPSLPKIRLSPLVSQRPLKENSTFMIHVLSPPPLSAQVVDSASGLLMPFYD
ADNSILYLAGKGDGNIRYYELVDESPYIHFLSEFKSATPQRGLCFLPKRCLNTSECEIAR
GLKVTPFTVEPISFRVPRKSDIFQDDIYPDTYAGEPSLTAEQWVSGTNAEPKTVSLAGGF
VKKASAVEFKPVVQVQEGPKNEKELREEYEKLKIRVAYLEX*nr*kgcqnqrthqln*

Homology AFF626 vs CSM-cDNA

Sequences producing significant alignments:                      (bits) Value


AFF626 (AFF626Q) /CSM/AF/AFF6-B/AFF626Q.Seq.d/                       2565   0.0
VFM855 (VFM855Q) /CSM/VF/VFM8-C/VFM855Q.Seq.d/                       1386   0.0
VFL504 (VFL504Q) /CSM/VF/VFL5-A/VFL504Q.Seq.d/                       1386   0.0
VFH766 (VFH766Q) /CSM/VF/VFH7-C/VFH766Q.Seq.d/                       1386   0.0
SFE549 (SFE549Q) /CSM/SF/SFE5-C/SFE549Q.Seq.d/                       1386   0.0
SFB166 (SFB166Q) /CSM/SF/SFB1-C/SFB166Q.Seq.d/                       1386   0.0
CFK472 (CFK472Q) /CSM/CF/CFK4-C/CFK472Q.Seq.d/                       1386   0.0
AFM531 (AFM531Q) /CSM/AF/AFM5-B/AFM531Q.Seq.d/                       1386   0.0
AFM138 (AFM138Q) /CSM/AF/AFM1-B/AFM138Q.Seq.d/                       1386   0.0
SFK894 (SFK894Q) /CSM/SF/SFK8-D/SFK894Q.Seq.d/                       1382   0.0

Homology AFF626 vs DNA

Sequences producing significant alignments:                  (bits) Value  N


X61480|X61480.1 D.discoideum mRNA for coronin.                   1063   0.0    5
CB928919|CB928919.1 ABA1_38_B07.b1_A012 Abscisic acid-treate...    68   1e-11  3
CD210549|CD210549.1 HS1_48_H10.b1_A012 Heat-shocked seedling...    68   1e-11  3
CD235972|CD235972.1 SS1_25_F03.b1_A012 Salt-stressed seedlin...    64   3e-08  3
AV803042|AV803042.1 Arabidopsis thaliana cDNA clone:RAFL09-3...    52   2e-05  2
AL428709|AL428709.1 clone BA0AB027D02 of library BA0AB from ...    40   3e-04  2
CF185608|CF185608.1 j2h09j2.r1 Cryptococcus neoformans strai...    54   0.001  2
BH162152|BH162152.1 ENTTF04TR Entamoeba histolytica Sheared ...    56   0.001  1
AZ542600|AZ542600.1 ENTET32TR Entamoeba histolytica Sheared ...    36   0.002  3
BH132994|BH132994.1 ENTNE76TF Entamoeba histolytica Sheared ...    36   0.45   2

Homology AFF626 vs Protein

Sequences producing significant alignments:                      (bits) Value


S18663(S18663) coronin - slime mold (Dictyostelium discoideum)  ...   414   0.0
AY525781_1(AY525781|pid:none) Acanthamoeba healyi coronin mRNA, ...   230   e-107
BC075371_1(BC075371|pid:none) Xenopus tropicalis coronin, actin ...   195   2e-93
BT058865_1(BT058865|pid:none) Salmo salar clone ssal-rgf-508-379...   188   1e-91
BC133331_1(BC133331|pid:none) Bos taurus coronin, actin binding ...   182   3e-91
AB209909_1(AB209909|pid:none) Homo sapiens mRNA for coronin, act...   182   5e-91
AM849477_1(AM849477|pid:none) Homo sapiens mRNA for Coronin-1C_i...   182   5e-91
AK023205_1(AK023205|pid:none) Homo sapiens cDNA FLJ13143 fis, cl...   182   6e-91
AF143957_1(AF143957|pid:none) Mus musculus coronin-3 mRNA, compl...   181   8e-91
(Q6QEF8) RecName: Full=Coronin-6; AltName: Full=Coronin-like pro...   174   8e-91

Homology AFF626 vs Genome