Dictyostelium discoideum cDNA Clone AFE411

Sequence AFE411

---------- TAACTCATCA ATACACTTTG GTCATTTCAC CAGATAACAC
CTACAAAGTA CTCGTCGATA NCAAAGAGAT CCAAGCAGGT AACCTCGCTG
ATGATTGGGA ATTACTTCCA TCAAAACAAA TCAAAGATCC AAAACAATCC
AAACCAGTCG ATTGGGTTGA CGTAAAGGAA ATCGATGACC CAGAAGATGT
TAAACCAGCC GGTCATGACG ATATCCCAGC TTCAATCGTT GATCCAGAAG
CTGTCAAACC AGAGGATTGG AATGAAGAAG ACGACGGTGA ATGGGAAGCC
CCAACCATCG CCAATCCAGA ATACAAAGGT GAATGGAAAG CAAAGAAAAT
CCCAAATCCA GAATACAAAG GTGAATGGGT ACACCCATTA ATTGATAACC
CAGAATACGC TGAAGACAAT GAACTCTACC TCTTTAATGA TCTCGGTGCT
ATCGGTTTCG AATTATGGCA AGTTAAATCT GGTTCCATCT TTAACAATAT
GATCGTCACC GACTCTGTCG AAGAAGCTAA AGATTTCTCT GAAAAGACCT
TTGTTGCCAA CCAAGAAGCC GAAAAGAAAA TGTTTGACGA CCTCGAAGCC
GCCAAAGCTG AAGAGAGAAA GAAAGCTGAC GAAAAATTAG CTGCCGAAAA
AGCTGCTGAA AAAGAAGCCG AAGAAGCTGA TGAAGAAGAA GAAGAAGT

Translated Amino Acid Sequence AFE411

---THQYTLVISPDNTYKVLVDXKEIQAGNLADDWELLPSKQIKDPKQSKPVDWVDVKEI
DDPEDVKPAGHDDIPASIVDPEAVKPEDWNEEDDGEWEAPTIANPEYKGEWKAKKIPNPE
YKGEWVHPLIDNPEYAEDNELYLFNDLGAIGFELWQVKSGSIFNNMIVTDSVEEAKDFSE
KTFVANQEAEKKMFDDLEAAKAEERKKADEKLAAEKAAEKEAEEADEEEEE

Homology AFE411 vs CSM-cDNA

Sequences producing significant alignments:                      (bits) Value


SFH171 (SFH171Q) /CSM/SF/SFH1-C/SFH171Q.Seq.d/                       1179   0.0
AFO349 (AFO349Q) /CSM/AF/AFO3-C/AFO349Q.Seq.d/                       1179   0.0
AFN528 (AFN528Q) /CSM/AF/AFN5-B/AFN528Q.Seq.d/                       1179   0.0
AFK286 (AFK286Q) /CSM/AF/AFK2-D/AFK286Q.Seq.d/                       1179   0.0
AFH852 (AFH852Q) /CSM/AF/AFH8-C/AFH852Q.Seq.d/                       1179   0.0
AFE411 (AFE411Q) /CSM/AF/AFE4-A/AFE411Q.Seq.d/                       1179   0.0
AFE410 (AFE410Q) /CSM/AF/AFE4-A/AFE410Q.Seq.d/                       1179   0.0
AFE318 (AFE318Q) /CSM/AF/AFE3-A/AFE318Q.Seq.d/                       1179   0.0
AFE168 (AFE168Q) /CSM/AF/AFE1-C/AFE168Q.Seq.d/                       1179   0.0
AFD463 (AFD463Q) /CSM/AF/AFD4-C/AFD463Q.Seq.d/                       1179   0.0

Homology AFE411 vs DNA

Sequences producing significant alignments:                  (bits) Value  N


U36937|U36937.1 Dictyostelium discoideum calreticulin mRNA, ...  1172   0.0    1
BH160872|BH160872.1 ENTRI18TR Entamoeba histolytica Sheared ...    80   1e-15  3
AZ543757|AZ543757.1 ENTGD24TR Entamoeba histolytica Sheared ...    80   5e-11  1
BI921109|BI921109.1 EST541012 tomato callus Lycopersicon esc...    74   3e-09  1
AI489195|AI489195.1 EST247534 tomato ovary, TAMU Lycopersico...    74   3e-09  1
AW649196|AW649196.1 EST327650 tomato germinating seedlings, ...    74   3e-09  1
BE435540|BE435540.1 EST406618 tomato breaker fruit, TIGR Lyc...    74   3e-09  1
AW932476|AW932476.1 EST358319 tomato fruit mature green, TAM...    74   3e-09  1
AI771812|AI771812.1 EST252912 tomato ovary, TAMU Lycopersico...    74   3e-09  1
AW033447|AW033447.1 EST277018 tomato callus, TAMU Lycopersic...    74   3e-09  1

Homology AFE411 vs Protein

Sequences producing significant alignments:                      (bits) Value


U36937_1(U36937|pid:none) Dictyostelium discoideum calreticulin ...   365   1e-99
FJ209028_1(FJ209028|pid:none) Lotharella amoeboformis calreticul...   243   5e-63
(Q9STD3) RecName: Full=Calreticulin; Flags: Precursor;  &AJ00076...   238   2e-61
JI169385_1(JI169385|pid:none) TSA: Ascaris suum ASCF_3886_1980 m...   229   9e-59
(Q9XF98) RecName: Full=Calreticulin; Flags: Precursor;  &AF13473...   225   1e-57
GQ396798_1(GQ396798|pid:none) Ditylenchus destructor calreticuli...   224   2e-57
AF283816_1(AF283816|pid:none) Pinus taeda calreticulin mRNA, com...   222   1e-56
AK318734_1(AK318734|pid:none) Arabidopsis thaliana AT1G56340 mRN...   221   2e-56
CP002684_6164(CP002684|pid:none) Arabidopsis thaliana chromosome...   221   2e-56
HC747478_1(HC747478|pid:none) Sequence 4569 from Patent WO201004...   221   3e-56

Homology AFE411 vs Genome