Dictyostelium discoideum cDNA Clone AFE410

Sequence AFE410

AATTTCTCCA ATCTAATATT TATAATNTAT CTTTTTTGTT TAATAAAAAA
GAAAGAATAC CAACATGAGA CTTTTATTGT GTTTAATTTT CTTAGTTTTT
GTTTTCAATT TTGCATTATC AACAGTTCAT TTCAAAGATA CCTTTGATAA
CGATTGGGAA TCAAGATGGG TTGTTAGTGA TTGGCATAAA GAAGATGGTA
AATCAGGTAA ATTAGTTCAT ACTGCAGGTA AATGGTTTGG TGATGAAAAT
CAAAAAGGTA TTCAAACTAG TGAAGATGCT CGTTTCTACG CTGTATCAGC
TAAATTCCCA AGTTTCAGTA ACAAAGGTAA AGATTTAGTT CTCCAATACA
CTGTAAAGAA TGAACAAAAA GTTGATTGTG GTGGTTCATA CATCAAGTTA
TTACCATCCA AATTAGATCA ATCAGCATTC GATGGTGAAT CTGAATATTC
CATTATGTTT GGTCCAGATG TTTGTGGTGC CTCAAAGAGA GTTCACGTCA
TTCTCAACTA CAAAGGAAAG AACCATTTAA TCAAGAAAGA AATCAACAAA
GTTGAAACCG ATCAATTAAC TCATCAATAC ACTTTGGTCA TTTCACCAGA
TAACACCTAC AAAGTACTCG TCGATAACAA AGAGATCCAA GCAGGTAACC
TCGCTGATGA TTGGGAATTA CTTCCATCAA AACAAATCAA AGATCCAAAA
CAATCCAAAC CAGTCGATTG GGTTGACGTA AAGGAAATCG ATGACCCAGA
AGATGTTAAA CCAGCCGGTC ATGACGATAT CCCAGCTTCA ATCGTTGATC
CAGAAGCTGT CAAACCAGAG GATTGGAATG AAGAAGACGA CGGTGAATGG
GAAGCCCCAA CCATCGCCAA TCCAGAATAC AAAGGTGAAT GGAAAGCAAA
GAAAATCCCA AATCCAGAAT ACAAAGGTGA ATGGGTACAC CCATTAATTG
ATAACCCAGA ATACGCTGAA GACAATGAAC TCTACCTCTT TAATGATCTC
GGTGCTATCG GTTTCGAATT ATGGCAAGTT AAATCTGGTT CCATCTTTAA
CAATATGATC GTCACCGACT CTGTCGAAGA AGCTAAAGAT TTCTCTGAAA
AGACCTTTGT TGCCAACCAA GAAGCCGAAA AGAAAATGTT TGACGACCTC
GAAGCCGCCA AAGCTGAAGA GAGAAAGAAA GCTGACGAAA AATTAGCTGC
CGAAAAAGCT GCTGAAAAAG AAGCCGAAGA AGCTGATGAA GAAGAAGAAG
AAGTCGCTGA AGAAGATTTA GTTAAAACTG ATGACAAAAA AGAAGAAGTC
AAAAAATCAA CCAAAAAAGT GATCAGACGA ACTTTAAANA AATAAATAA

Translated Amino Acid Sequence AFE410

ispi*yl*xiffv**KRKNTNMRLLLCLIFLVFVFNFALSTVHFKDTFDNDWESRWVVSD
WHKEDGKSGKLVHTAGKWFGDENQKGIQTSEDARFYAVSAKFPSFSNKGKDLVLQYTVKN
EQKVDCGGSYIKLLPSKLDQSAFDGESEYSIMFGPDVCGASKRVHVILNYKGKNHLIKKE
INKVETDQLTHQYTLVISPDNTYKVLVDNKEIQAGNLADDWELLPSKQIKDPKQSKPVDW
VDVKEIDDPEDVKPAGHDDIPASIVDPEAVKPEDWNEEDDGEWEAPTIANPEYKGEWKAK
KIPNPEYKGEWVHPLIDNPEYAEDNELYLFNDLGAIGFELWQVKSGSIFNNMIVTDSVEE
AKDFSEKTFVANQEAEKKMFDDLEAAKAEERKKADEKLAAEKAAEKEAEEADEEEEEVAE
EDLVKTDDKKEEVKKSTKKVIRRTLXK*i

Homology AFE410 vs CSM-cDNA

Sequences producing significant alignments:                      (bits) Value


AFN528 (AFN528Q) /CSM/AF/AFN5-B/AFN528Q.Seq.d/                       2125   0.0
AFK286 (AFK286Q) /CSM/AF/AFK2-D/AFK286Q.Seq.d/                       2125   0.0
AFE410 (AFE410Q) /CSM/AF/AFE4-A/AFE410Q.Seq.d/                       2125   0.0
AFE318 (AFE318Q) /CSM/AF/AFE3-A/AFE318Q.Seq.d/                       2125   0.0
AFE168 (AFE168Q) /CSM/AF/AFE1-C/AFE168Q.Seq.d/                       2125   0.0
AFD463 (AFD463Q) /CSM/AF/AFD4-C/AFD463Q.Seq.d/                       2125   0.0
AFJ570 (AFJ570Q) /CSM/AF/AFJ5-C/AFJ570Q.Seq.d/                       2119   0.0
AFA657 (AFA657Q) /CSM/AF/AFA6-C/AFA657Q.Seq.d/                       2119   0.0
AFK245 (AFK245Q) /CSM/AF/AFK2-B/AFK245Q.Seq.d/                       2117   0.0
AFG846 (AFG846Q) /CSM/AF/AFG8-B/AFG846Q.Seq.d/                       2117   0.0

Homology AFE410 vs DNA

Sequences producing significant alignments:                  (bits) Value  N


U36937|U36937.1 Dictyostelium discoideum calreticulin mRNA, ...  2117   0.0    3
BD248385|BD248385.1 Gene participating in tolerance against ...    92   1e-27  4
BH160872|BH160872.1 ENTRI18TR Entamoeba histolytica Sheared ...    80   3e-21  4
AZ543757|AZ543757.1 ENTGD24TR Entamoeba histolytica Sheared ...    80   1e-10  1
BI921109|BI921109.1 EST541012 tomato callus Lycopersicon esc...    74   2e-10  2
BT013428|BT013428.1 Lycopersicon esculentum clone 132068F, m...    74   5e-10  2
CK247437|CK247437.1 EST731074 potato callus cDNA library, no...    66   5e-09  3
CK253744|CK253744.1 EST737381 potato callus cDNA library, no...    66   6e-09  3
AI782264|AI782264.1 EST263143 tomato susceptible, Cornell Ly...    74   6e-09  1
AW033447|AW033447.1 EST277018 tomato callus, TAMU Lycopersic...    74   6e-09  1

Homology AFE410 vs Protein

Sequences producing significant alignments:                      (bits) Value


U36937_1(U36937|pid:none) Dictyostelium discoideum calreticulin ...   681   0.0
AK318734_1(AK318734|pid:none) Arabidopsis thaliana AT1G56340 mRN...   417   e-115
CP002684_6164(CP002684|pid:none) Arabidopsis thaliana chromosome...   417   e-115
HC747438_1(HC747438|pid:none) Sequence 4529 from Patent WO201004...   414   e-114
AB196794_1(AB196794|pid:none) Glycine max Gm crt-1 mRNA for calr...   414   e-114
(Q9XF98) RecName: Full=Calreticulin; Flags: Precursor;  &AF13473...   414   e-114
(Q40401) RecName: Full=Calreticulin; Flags: Precursor;  &T16968(...   414   e-114
AC133339_28(AC133339|pid:none) Oryza sativa chromosome 3 BAC OSJ...   414   e-114
HC747456_1(HC747456|pid:none) Sequence 4547 from Patent WO201004...   414   e-114
AF283816_1(AF283816|pid:none) Pinus taeda calreticulin mRNA, com...   412   e-113

Homology AFE410 vs Genome