Dictyostelium discoideum cDNA Clone AFD323

Sequence AFD323

CATTTTCACT AATTTCCCAA CAATTAATAG AACTCTGAAA ATAAATAAGA
AATTAAAAAT GAAATTTTAT ATTGAAGATC TTTTAGTATA TTTTCCATAT
TCATATATTT ATCCAGAACA GTATAGTTAT ATGGTAGCAT TAAAGAGATC
ATTAGATAAT GGTGGACCAT GTATATTAGA GATGCCAAGT GGTACTGGTA
AGACGGTATC ATTGCTATCG TTAATTTCAT CATATCAAGT TAAAAATCCA
TCAATTAAAT TAATTTATTG TTCAAGAACA GTGCCAGAGA TTGAACAAGC
TACAGAAGAG GCTAGAAGGG TATTACAATA TAGGAATTCA GAAATGGGGG
AAGAGTCACC TAAAACGTTA TGTATGTCAA TGTCGTCACG TCGTAACCTT
TGTATTCAAC CAAGGGTATC GGAAGAGAGG GATGGTAAAG TGGTCGATGC
CCTCTGTAGA GAGTTGACAT CCTCATGGAA TAGGGAGTCA CCCACGAGTG
AAAAATGTAA ATTTTTCGAG AATTTTGAAT CTAACGGAAA GGAAATCCTA
CTAGAAGGGG TGTATTCATT GGAAGATCTA AAAGAGTATG GATTAAAACA
TCAAATGTGT CCATACTTTT TATCAAGACA TATGTTGAAT TTT-------
---TGTTTTT TCACTTCCTA TAGCTATATG GAGCAAATCG TATCGGTTTG
GAATGAAATG GGTCTGTTAA ATAATATTCT AACCAATAAG TTAATATTTG
TTGAAACTTC AGATCCTGCC GAATCAGCAT TGGCATTGCA AAACTACAAG
AAAGCATGCG ACAGTGGTAG AGGTGCCGTA CTACTTTCAG TGGCAAGAGG
TAAGGTGTCT GAGGGTATCG ATTTCGATAA TCAGTATGGC AGATGCGTCA
TTCTCTATGG CATACCTTAC ATCAATACCG AGAGTAAGGT ATTACGTGCA
CGTTTGGAAT TCCTTAGAGA TCGTTATCAA ATTAGAGAGA ATGAATTCCT
AACTTTTGAT GCAATGAGAA CTGCTTCTCA ATGTGTTGGT AGAGTCATTC
GTGGTAAATC CGATTATGGT ATCATGATCT TTGCTGATAA ACGTTACAAT
CGTTTAGATA AACGTAATAA ATTACCACAA TGGATCTTAC AATTTTGTCA
ACCTCAACAT TTAAATCTTT CAACTGATAT GGCAATTTCA CTTTCAAAAA
CTTTTTTAAG AGAAATGGGT CAACCATTTT CAAGAGAAGA ACAATTAGGT
AAATCATTAT GGAGTTTAGA ACATGTTGAA AAACAATCAA CAAGTAAACC
ACCACAACAA CAAAATTCAG CTATAAATTC AACTATTACA ACTTCTACTA
CTACTACAAC CACGACTTCT ACAATTTCNA AACACATTT

Translated Amino Acid Sequence AFD323

IFTNFPTINRTLKINKKLKMKFYIEDLLVYFPYSYIYPEQYSYMVALKRSLDNGGPCILE
MPSGTGKTVSLLSLISSYQVKNPSIKLIYCSRTVPEIEQATEEARRVLQYRNSEMGEESP
KTLCMSMSSRRNLCIQPRVSEERDGKVVDALCRELTSSWNRESPTSEKCKFFENFESNGK
EILLEGVYSLEDLKEYGLKHQMCPYFLSRHMLNF---

---CFFTSYSYMEQIVSVWNEMGLLNNILTNKLIFVETSDPAESALALQNYKKACDSGRG
AVLLSVARGKVSEGIDFDNQYGRCVILYGIPYINTESKVLRARLEFLRDRYQIRENEFLT
FDAMRTASQCVGRVIRGKSDYGIMIFADKRYNRLDKRNKLPQWILQFCQPQHLNLSTDMA
ISLSKTFLREMGQPFSREEQLGKSLWSLEHVEKQSTSKPPQQQNSAINSTITTSTTTTTT
TSTISKHI

Homology AFD323 vs CSM-cDNA

Sequences producing significant alignments:                      (bits) Value


AFD323 (AFD323Q) /CSM/AF/AFD3-A/AFD323Q.Seq.d/                       2688   0.0
AHF812 (AHF812Q) /CSM/AH/AHF8-A/AHF812Q.Seq.d/                       1453   0.0
AHK619 (AHK619Q) /CSM/AH/AHK6-A/AHK619Q.Seq.d/                       1445   0.0
AFM169 (AFM169Q) /CSM/AF/AFM1-C/AFM169Q.Seq.d/                       1441   0.0
VHC393 (VHC393Q) /CSM/VH/VHC3-D/VHC393Q.Seq.d/                       1439   0.0
VHB116 (VHB116Q) /CSM/VH/VHB1-A/VHB116Q.Seq.d/                       1439   0.0
VHA271 (VHA271Q) /CSM/VH/VHA2-C/VHA271Q.Seq.d/                       1433   0.0
CHF863 (CHF863Q) /CSM/CH/CHF8-C/CHF863Q.Seq.d/                       1433   0.0
CHI534 (CHI534Q) /CSM/CH/CHI5-B/CHI534Q.Seq.d/                       1425   0.0
CHR651 (CHR651Q) /CSM/CH/CHR6-C/CHR651Q.Seq.d/                       1403   0.0

Homology AFD323 vs DNA

Sequences producing significant alignments:                  (bits) Value  N


(BJ351115) Dictyostelium discoideum cDNA clone:dda42h04, 3' ...  1453   0.0    1
(BJ341561) Dictyostelium discoideum cDNA clone:dda7n05, 3' e...  1453   0.0    1
(BJ353961) Dictyostelium discoideum cDNA clone:dda52e06, 3' ...  1445   0.0    1
(BJ346936) Dictyostelium discoideum cDNA clone:dda25i17, 3' ...  1441   0.0    1
(U77066) Dictyostelium discoideum DNA helicase homolog (repD...  1437   0.0    1
(BJ437947) Dictyostelium discoideum cDNA clone:ddv35j23, 3' ...  1435   0.0    1
(BJ437100) Dictyostelium discoideum cDNA clone:ddv33o03, 3' ...  1435   0.0    1
(BJ436604) Dictyostelium discoideum cDNA clone:ddv31m18, 3' ...  1433   0.0    1
(BJ379072) Dictyostelium discoideum cDNA clone:ddc33n16, 3' ...  1433   0.0    1
(BJ380770) Dictyostelium discoideum cDNA clone:ddc39c09, 3' ...  1421   0.0    1

Homology AFD323 vs Protein

Sequences producing significant alignments:                      (bits) Value


(Q55G81) RecName: Full=TFIIH basal transcription factor complex ...   454   e-126
AY092780_1(AY092780|pid:none) Homo sapiens excision repair cross...   284   7e-75
FQ311433_38(FQ311433|pid:none) Sporisorium reilianum SRZ2 chromo...   284   1e-74
U97572_1(U97572|pid:none) Mus musculus DNA helicase (XPD/ERCC2) ...   283   1e-74
(O08811) RecName: Full=TFIIH basal transcription factor complex ...   283   2e-74
AK004652_1(AK004652|pid:none) Mus musculus adult male lung cDNA,...   283   2e-74
AK130849_1(AK130849|pid:none) Homo sapiens cDNA FLJ27339 fis, cl...   283   2e-74
AB170535_1(AB170535|pid:none) Macaca fascicularis brain cDNA clo...   283   2e-74
BC110522_1(BC110522|pid:none) Homo sapiens excision repair cross...   283   2e-74
BC110523_1(BC110523|pid:none) Homo sapiens excision repair cross...   283   2e-74

Homology AFD323 vs Genome