Dictyostelium discoideum cDNA Clone AFC290

Sequence AFC290

AAAATTGTAG AGTTGCAGGT TGTATTGAAA ATGTATTAAA ATTATTAAAA
TCAACTAAAC CATCAATTCA AGATAGTTCA TTGAGAATGT TATATAATAT
GACAATTACA GATGCAAATA GAGAGGCAAT TAGACGTTGT AAAGGTTTGG
AAACATTAGC ATCAATGTTG AGTGGTCAAG CAGAAGCATT GACTTTATTA
TCATTGAAAG CCCTCTCAAA TATGGCTGTC GATAGACAAA CCATTGAATA
TGCAGTAGCC AATCAAGAGA GTGTACTTCA ACCAATATAT GGTGTTTTCC
CATCAAGCTA TGGTCAAGGT TGTAGTGATG CATTATTGGA TCAAGTGTTA
ACAGTTATTC AAAATTTAGT CTCTGAAGAG AATTTAATTG ATACAGTCGC
AAAGAGTGGT ATCATTGCTA AATTGGTTGG TGCCACCAAA GGTATGCCAT
TGACAAACAC AACTCATCAA TCCATACTCG TCAAAGCATC ATGTATCATT
AGTGCTCTCA TTACCATTGA AGAAGTTCAA CAAGCTGCCG TAGAACAAGG
TGTAATCACA TTATTGGTTG AAATGATTCA ACTTCCATCC GCTGAAGTTA
GAAGAGAGGC TGCTCGTGCT CTCGCCAATG CCACACCATA CTATGATGAT
GTTAGAGCTG AAATTGGTGC ACAAGGTGGT GTTAAACTTT GTGTTGATCT
CTTGTTACAA GCCGATAAGG AATTGGTTAA ACAAGCTGCT CGTGCTTTGG
TTAATTTAGC ACGTAACACT CATAATGAAG AGAAACTTTA TGAATCAAAA
GGTTTGGAAC ATAGTATTCG TTTAATCAAT TCTCCAGAGA AAGATTTGAA
AATGTTGGGT ACTAAACTTT TGGTTAATCT TTCATTGAAT GAACAAGCTC
GTATTGCTTT CTGTCAAAAG GGTGGTCTTT CAATCGTAGT TCAACTCTTG
ACATCATCAG ATCCTGAACT TCAATTACAA GGTACTAAAA TCGCTACAAA
TCTTGCCATC AGTGGTAGAA ATCGTAAGGT TATGAATGAA CAAGCACCAG
ATCTTATTCC AGCACTTAAA GCACTCGTCA ATTCATCCGT TAGTGATATT
AAACTTCAAA GTGAAGTATC ATTGAATAAT TTAGCTTTCC CATATGAAGC
TTCCTATGAA GGTTTGGATC AAATGGAGGA TGCCATGCCA ATCTTTATGC
AATCGTCACA ATATGAAAAG AGATGACGAT GACGAAGATG ATGAAGATGA
AGCTGAAAAA GATGAACGTC GTCGTCAAGA AGAGGAAGAA CTTAGATTGG
CCGCAGAGAA AGAAGTCGAA GAACGTAAAC GTATCATGCA AGAAGAGGTA
AAGAGAATTG AAGAACGTCG TAAAGCTGAA CATGAAAAGA GACTTCAAGA
GGAACAAGAA TTACGTCAAA AGAAAGAAGA GGCAGAGAAA TTAAGATTAG
CTCAAGAGGC AATGGAGAAA TTAAGATTGG AACAAGAAGC TGCCGCCGCT
GCTGAAGCTG AAAAAATTAG ATTGGCCGAA GAACAACGTA TCATCAAAGA
GAAAGAAGTC GCNAACAAGA ACGTA

Translated Amino Acid Sequence AFC290

NCRVAGCIENVLKLLKSTKPSIQDSSLRMLYNMTITDANREAIRRCKGLETLASMLSGQA
EALTLLSLKALSNMAVDRQTIEYAVANQESVLQPIYGVFPSSYGQGCSDALLDQVLTVIQ
NLVSEENLIDTVAKSGIIAKLVGATKGMPLTNTTHQSILVKASCIISALITIEEVQQAAV
EQGVITLLVEMIQLPSAEVRREAARALANATPYYDDVRAEIGAQGGVKLCVDLLLQADKE
LVKQAARALVNLARNTHNEEKLYESKGLEHSIRLINSPEKDLKMLGTKLLVNLSLNEQAR
IAFCQKGGLSIVVQLLTSSDPELQLQGTKIATNLAISGRNRKVMNEQAPDLIPALKALVN
SSVSDIKLQSEVSLNNLAFPYEASYEGLDQMEDAMPIFMQSSQYEKR*r*rr**r*s*kr
*tsssrrgrt*igrrersrrt*tyharrgken*rts*s*t*ketsrgtritskerrgrei
kissrgngeikigtrscrrc*s*kn*igrrttyhqrersrxqer

Homology AFC290 vs CSM-cDNA

Sequences producing significant alignments:                      (bits) Value


AFC290 (AFC290Q) /CSM/AF/AFC2-D/AFC290Q.Seq.d/                       3116   0.0
AFM528 (AFM528Q) /CSM/AF/AFM5-B/AFM528Q.Seq.d/                       1362   0.0
AHO467 (AHO467Q) /CSM/AH/AHO4-C/AHO467Q.Seq.d/                       1352   0.0
VHI229 (VHI229Q) /CSM/VH/VHI2-B/VHI229Q.Seq.d/                       1193   0.0
AHA590 (AHA590Q) /CSM/AH/AHA5-D/AHA590Q.Seq.d/                       1108   0.0
AHM370 (AHM370Q) /CSM/AH/AHM3-C/AHM370Q.Seq.d/                       1092   0.0
VHN260 (VHN260Q) /CSM/VH/VHN2-C/VHN260Q.Seq.d/                       1078   0.0
VHK524 (VHK524Q) /CSM/VH/VHK5-A/VHK524Q.Seq.d/                       1078   0.0
VHD493 (VHD493Q) /CSM/VH/VHD4-D/VHD493Q.Seq.d/                       1074   0.0
AHL547 (AHL547Q) /CSM/AH/AHL5-B/AHL547Q.Seq.d/                       1072   0.0

Homology AFC290 vs DNA

Sequences producing significant alignments:                  (bits) Value  N


(BJ422885) Dictyostelium discoideum cDNA clone:ddv47i08, 5' ...  1193   0.0    1
(BJ329793) Dictyostelium discoideum cDNA clone:dda26g07, 5' ...  1096   0.0    1
(BJ324322) Dictyostelium discoideum cDNA clone:dda5c24, 5' e...  1082   0.0    1
(BJ443201) Dictyostelium discoideum cDNA clone:ddv52o05, 3' ...  1078   0.0    1
(BJ356196) Dictyostelium discoideum cDNA clone:dda59f18, 3' ...   807   0.0    2
(BJ347170) Dictyostelium discoideum cDNA clone:dda26g07, 3' ...   664   0.0    2
(BJ341233) Dictyostelium discoideum cDNA clone:dda5c24, 3' e...   607   0.0    2
(BJ331158) Dictyostelium discoideum cDNA clone:dda34j02, 5' ...   967   0.0    2
(BJ348288) Dictyostelium discoideum cDNA clone:dda32c23, 3' ...   815   0.0    2
(BJ355068) Dictyostelium discoideum cDNA clone:dda55l17, 3' ...   805   0.0    2

Homology AFC290 vs Protein

Sequences producing significant alignments:                      (bits) Value


FR824190_20(FR824190|pid:none) Albugo laibachii Nc14, genomic co...    80   4e-13
EF107732_1(EF107732|pid:none) Pichia angusta Vac8p (vac8) gene, ...    79   9e-13
AM989984_51(AM989984|pid:none) Zygosaccharomyces rouxii strain C...    78   1e-12
(Q2U5T5) RecName: Full=Vacuolar protein 8;  &AP007166_440(AP0071...    76   6e-12
(Q6FJV1) RecName: Full=Vacuolar protein 8;  &CR380959_145(CR3809...    76   6e-12
FN393067_68(FN393067|pid:none) Saccharomyces cerevisiae EC1118 c...    75   1e-11
(Q2GW27) RecName: Full=Vacuolar protein 8;                             72   7e-11
HE580270_118(HE580270|pid:none) Naumovozyma dairenensis CBS 421 ...    72   7e-11
AE017341_348(AE017341|pid:none) Cryptococcus neoformans var. neo...    71   2e-10
FQ790349_160(FQ790349|pid:none) Botryotinia fuckeliana isolate T...    71   2e-10

Homology AFC290 vs Genome