Homology AFC290 vs DNA
Query= AFC290 (AFC290Q) /CSM/AF/AFC2-D/AFC290Q.Seq.d/
(1575 letters)
Database: ddbj_A
142,339,601 sequences; 131,276,394,833 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value N
(BJ422885) Dictyostelium discoideum cDNA clone:ddv47i08, 5' ... 1193 0.0 1
(BJ329793) Dictyostelium discoideum cDNA clone:dda26g07, 5' ... 1096 0.0 1
(BJ324322) Dictyostelium discoideum cDNA clone:dda5c24, 5' e... 1082 0.0 1
(BJ443201) Dictyostelium discoideum cDNA clone:ddv52o05, 3' ... 1078 0.0 1
(BJ356196) Dictyostelium discoideum cDNA clone:dda59f18, 3' ... 807 0.0 2
(BJ347170) Dictyostelium discoideum cDNA clone:dda26g07, 3' ... 664 0.0 2
(BJ341233) Dictyostelium discoideum cDNA clone:dda5c24, 3' e... 607 0.0 2
(BJ331158) Dictyostelium discoideum cDNA clone:dda34j02, 5' ... 967 0.0 2
(BJ348288) Dictyostelium discoideum cDNA clone:dda32c23, 3' ... 815 0.0 2
(BJ355068) Dictyostelium discoideum cDNA clone:dda55l17, 3' ... 805 0.0 2
(BJ444829) Dictyostelium discoideum cDNA clone:ddv57g16, 3' ... 817 0.0 2
(BJ438423) Dictyostelium discoideum cDNA clone:ddv37j24, 3' ... 799 0.0 2
(BJ354683) Dictyostelium discoideum cDNA clone:dda54m11, 3' ... 811 0.0 2
(BJ329783) Dictyostelium discoideum cDNA clone:dda26e08, 5' ... 928 0.0 1
(BJ408846) Dictyostelium discoideum cDNA clone:dds47l03, 3' ... 662 0.0 2
(BJ378475) Dictyostelium discoideum cDNA clone:ddc31h03, 3' ... 652 0.0 2
(BJ347159) Dictyostelium discoideum cDNA clone:dda26e08, 3' ... 531 0.0 2
(BJ352708) Dictyostelium discoideum cDNA clone:dda47k16, 3' ... 733 0.0 2
(BJ428081) Dictyostelium discoideum cDNA clone:ddv10n17, 3' ... 607 0.0 2
(BJ382512) Dictyostelium discoideum cDNA clone:ddc45a03, 3' ... 724 0.0 2
(BJ438291) Dictyostelium discoideum cDNA clone:ddv37a13, 3' ... 856 0.0 1
(BJ385262) Dictyostelium discoideum cDNA clone:ddc54j08, 3' ... 615 0.0 4
(BJ378638) Dictyostelium discoideum cDNA clone:ddc32j09, 3' ... 670 0.0 2
(BJ348673) Dictyostelium discoideum cDNA clone:dda33p24, 3' ... 670 0.0 2
(BJ445114) Dictyostelium discoideum cDNA clone:ddv58a16, 3' ... 668 0.0 2
(BJ405323) Dictyostelium discoideum cDNA clone:dds31f11, 3' ... 656 0.0 2
(BJ379950) Dictyostelium discoideum cDNA clone:ddc36d16, 3' ... 656 0.0 2
(BJ349759) Dictyostelium discoideum cDNA clone:dda37f14, 3' ... 656 0.0 2
(BJ382655) Dictyostelium discoideum cDNA clone:ddc45p09, 3' ... 664 0.0 2
(BJ353695) Dictyostelium discoideum cDNA clone:dda51k03, 3' ... 662 0.0 2
(BJ336916) Dictyostelium discoideum cDNA clone:dda55j14, 5' ... 797 0.0 1
(BJ407637) Dictyostelium discoideum cDNA clone:dds43n02, 3' ... 587 0.0 2
(BJ440322) Dictyostelium discoideum cDNA clone:ddv43g12, 3' ... 529 0.0 2
(BJ338078) Dictyostelium discoideum cDNA clone:dda60c02, 5' ... 682 0.0 1
(BJ356722) Dictyostelium discoideum cDNA clone:dda61b10, 3' ... 533 0.0 2
(BJ409956) Dictyostelium discoideum cDNA clone:ddv10n17, 5' ... 628 e-175 1
(BJ440324) Dictyostelium discoideum cDNA clone:ddv43h08, 3' ... 410 e-160 2
(BJ355618) Dictyostelium discoideum cDNA clone:dda57n16, 3' ... 402 e-158 3
(BJ444112) Dictyostelium discoideum cDNA clone:ddv55d12, 3' ... 355 e-152 3
(BJ396337) Dictyostelium discoideum cDNA clone:dds42g14, 5' ... 517 e-142 1
(BJ391328) Dictyostelium discoideum cDNA clone:dds13b08, 5' ... 295 3e-75 1
(GU904637) Dictyostelium giganteum clone Dicty_1J01 microsat... 56 0.006 1
(BJ370672) Dictyostelium discoideum cDNA clone:ddc54o24, 5' ... 42 0.079 2
(AC110358) Rattus norvegicus clone CH230-238G5, *** SEQUENCI... 52 0.086 1
(AC109107) Rattus norvegicus clone CH230-152L5, WORKING DRAF... 52 0.086 1
(AU285039) Dictyostelium discoideum gamete cDNA clone:FCL-AB... 52 0.086 1
(BJ372058) Dictyostelium discoideum cDNA clone:ddc11i01, 3' ... 42 0.095 2
(BJ343146) Dictyostelium discoideum cDNA clone:dda22m06, 3' ... 42 0.11 2
(FV536229) JP 2009538603-A/208: Modified Microbial Nucleic A... 50 0.34 1
(FV536228) JP 2009538603-A/207: Modified Microbial Nucleic A... 50 0.34 1
(FV536105) JP 2009538603-A/84: Modified Microbial Nucleic Acid. 50 0.34 1
(FV536104) JP 2009538603-A/83: Modified Microbial Nucleic Acid. 50 0.34 1
(HS230538) CCTS20892.b1 CCTS Crassostrea gigas mixed adult t... 50 0.34 1
(CP000282) Saccharophagus degradans 2-40, complete genome. 50 0.34 1
(CA079647) SCSFAM1075G10.g AM1 Saccharum hybrid cultivar SP8... 46 0.41 2
(CA195577) SCSBSB1095H11.g SB1 Saccharum hybrid cultivar SP8... 46 0.45 2
(CF573712) MCSA074D09 Maturing Sugarcane Stem Lambda ZIPLOX ... 46 0.47 2
(CA206432) SCVPFL1069D05.g FL1 Saccharum hybrid cultivar (mi... 46 0.55 2
(AC172866) Brassica rapa subsp. campestris clone KBrH002D01,... 42 0.83 2
(JI115033) TSA: Bombus impatiens Contig22863.Boim mRNA seque... 48 1.3 1
(FV536183) JP 2009538603-A/162: Modified Microbial Nucleic A... 48 1.3 1
(FV536182) JP 2009538603-A/161: Modified Microbial Nucleic A... 48 1.3 1
(AC131529) Rattus norvegicus clone CH230-434C6, *** SEQUENCI... 48 1.3 1
(AC107186) Rattus norvegicus clone CH230-130H3, *** SEQUENCI... 48 1.3 1
(BH442662) BOGSJ63TF BOGS Brassica oleracea genomic clone BO... 48 1.3 1
(FI680184) BOT01-31O3TR BOT01 Brassica oleracea genomic clon... 48 1.3 1
(CC964835) BOIHK78TF BO_1.4_1.6_KB_nuc Brassica oleracea gen... 48 1.3 1
(DK572523) Brassica oleracea var. acephala mRNA, clone: KALE... 48 1.3 1
(DK570011) Brassica oleracea var. acephala mRNA, clone: KALE... 48 1.3 1
(DK565696) Brassica oleracea var. acephala mRNA, clone: KALE... 48 1.3 1
(DK555956) Brassica oleracea var. acephala mRNA, clone: KALE... 48 1.3 1
(DK526039) Brassica oleracea var. acephala mRNA, clone: KALE... 48 1.3 1
(DK516378) Brassica oleracea var. acephala mRNA, clone: KALE... 48 1.3 1
(CP002955) Cyclobacterium marinum DSM 745, complete genome. 34 2.1 2
(AW871126) ra55a10.y1 Bird-Rao Meloidogyne incognita J2 Melo... 42 3.7 2
(CF980958) re10h09.y1 Meloidogyne incognita female SL1 pGEM ... 42 3.7 2
(BE578330) rk10g07.y1 Meloidogyne javanica Egg SL1 Topo1 Klo... 42 4.3 2
(GW412604) Ps_Lib1E_39AG05_PSC01410 Unstressed mixed stage P... 42 4.4 2
(AC189615) Brassica rapa subsp. pekinensis clone KBrH098A19,... 42 4.8 3
(JL715512) TSA: Bombus terrestris a5261.bterqhead mRNA seque... 46 5.3 1
(JL643646) TSA: Bombus terrestris a2366.btermhead mRNA seque... 46 5.3 1
(JI078516) TSA: Bombus insularis Contig35348.Boin mRNA seque... 46 5.3 1
(JI033447) TSA: Bombus terrestris Contig7935.Bote mRNA seque... 46 5.3 1
(AC182540) Ateles geoffroyi clone UC1-338I2, complete sequence. 46 5.3 1
(AC151367) Aotus nancymaae clone CH258-235H23, complete sequ... 46 5.3 1
(AC208992) Populus trichocarpa clone JGIACSB1089-D05, comple... 46 5.3 1
(FV536185) JP 2009538603-A/164: Modified Microbial Nucleic A... 46 5.3 1
(FV536184) JP 2009538603-A/163: Modified Microbial Nucleic A... 46 5.3 1
(FV536125) JP 2009538603-A/104: Modified Microbial Nucleic A... 46 5.3 1
(FV536124) JP 2009538603-A/103: Modified Microbial Nucleic A... 46 5.3 1
(BC149959) Bos taurus WD repeat domain 75, mRNA (cDNA clone ... 46 5.3 1
(Z84712) Caenorhabditis elegans Cosmid T24B1. 46 5.3 1
(FR796422) Leishmania major strain Friedlin complete genome,... 46 5.3 1
(AC162323) Bos taurus clone CH240-116P16, WORKING DRAFT SEQU... 46 5.3 1
(AC152895) Aotus nancymaae clone CH258-168B20, WORKING DRAFT... 46 5.3 1
(CT797465) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 46 5.3 1
(AC222766) Bos taurus clone CH240-43B20, WORKING DRAFT SEQUE... 46 5.3 1
(AC220899) Bos taurus clone CH240-342B4, WORKING DRAFT SEQUE... 46 5.3 1
(AC220891) Bos taurus clone CH240-341O5, WORKING DRAFT SEQUE... 46 5.3 1
(AC220033) Bos taurus clone CH240-315M22, WORKING DRAFT SEQU... 46 5.3 1
(AC218744) Bos taurus clone CH240-295F11, WORKING DRAFT SEQU... 46 5.3 1
(AC177531) Bos taurus clone CH240-135H16, *** SEQUENCING IN ... 46 5.3 1
(AC172539) Bos taurus clone CH240-223O2, WORKING DRAFT SEQUE... 46 5.3 1
(AC170014) Bos taurus clone CH240-219M16, WORKING DRAFT SEQU... 46 5.3 1
(AC164362) Bos taurus clone CH240-132A10, WORKING DRAFT SEQU... 46 5.3 1
(HN107450) GSS_Ba002J02.F GSS_Ba Glycine soja genomic 5', ge... 46 5.3 1
(CC546561) CH240_429D11.TARBAC13P2 CHORI-240 Bos taurus geno... 46 5.3 1
(DT767996) EST1201845 Aquilegia cDNA library Aquilegia formo... 46 5.3 1
(DK227726) Oryzias latipes cDNA, clone: olova65c24, 3' end. 46 5.3 1
(DK204543) Oryzias latipes cDNA, clone: olova65c24, 5' end. 46 5.3 1
(CV982048) UMC-bmix_0A02-009-a02 Day 3 Corpus Luteum bmix Bo... 46 5.3 1
(AM036076) Bos taurus 3' EST, clone C0007404c19. 46 5.3 1
(AM036022) Bos taurus 3' EST, clone C0007403c19. 46 5.3 1
(AM035860) Bos taurus 3' EST, clone C0006010c16. 46 5.3 1
(AM035338) Bos taurus 5' EST, clone C0007404c19. 46 5.3 1
(AM035285) Bos taurus 5' EST, clone C0007403c19. 46 5.3 1
(AM035125) Bos taurus 5' EST, clone C0006010c16. 46 5.3 1
(AM029725) Bos indicus 3' EST, clone C0005915b08. 46 5.3 1
(AM021535) Bos sp. 5' EST, clone C0007393h22. 46 5.3 1
(AM012375) Bos indicus 5' EST, clone C0007383c20. 46 5.3 1
(AM011796) Bos indicus 3' EST, clone C0007383c20. 46 5.3 1
(AM010181) Bos indicus 5' EST, clone C0007383c20. 46 5.3 1
(AM009576) Bos indicus 3' EST, clone C0007381m20. 46 5.3 1
(CN789432) 4123894 BARC 8BOV Bos taurus cDNA clone 8BOV_30B0... 46 5.3 1
(CK966525) 4081690 BARC 9BOV Bos taurus cDNA clone 9BOV1_E11... 46 5.3 1
(CK966125) 4081306 BARC 9BOV Bos taurus cDNA clone 9BOV1_E11... 46 5.3 1
(CB459076) 718553 MARC 6BOV Bos taurus cDNA 5', mRNA sequence. 46 5.3 1
(CA274088) SCRLSD1012G03.g SD1 Saccharum hybrid cultivar (mi... 46 5.3 1
(CA152783) SCJFRZ2031H08.g RZ2 Saccharum hybrid cultivar SP8... 46 5.3 1
(CA150194) SCCCRZ2C03H05.g RZ2 Saccharum hybrid cultivar SP8... 46 5.3 1
(FG282692) C0008177F16 KN-252-spleen, Bos sp. Bos sp. cDNA c... 46 5.3 1
(FD456755) EGGB976TF Haematobia irritans eggs Haematobia irr... 46 5.3 1
(EV720907) LB03247.C21_M03 GC_BGC-32 Bos taurus cDNA clone I... 46 5.3 1
(DQ676934) Escherichia coli strain CB9827 serogroup O123 O a... 46 5.3 1
(DQ676933) Escherichia coli strain 43w serogroup O123 O anti... 46 5.3 1
(FV536027) JP 2009538603-A/6: Modified Microbial Nucleic Acid. 34 7.6 2
(FV536026) JP 2009538603-A/5: Modified Microbial Nucleic Acid. 34 7.6 2
(AC072053) Homo sapiens BAC clone RP11-21A5 from 2, complete... 38 7.9 3
(CF647268) 3530_1_41_1_E07.x_1 3530 - Full length cDNA libra... 40 8.6 2
(AM270075) Aspergillus niger contig An04c0140, genomic contig. 32 9.3 2
(HP872571) TSA: Melipona quadrifasciata Contig23634.Mequ mRN... 34 9.4 4
(AC183073) Bos taurus clone CH240-76E5, WORKING DRAFT SEQUEN... 32 9.8 2
(AL807390) Mouse DNA sequence from clone RP23-223F2 on chrom... 34 9.8 2
>(BJ422885) Dictyostelium discoideum cDNA clone:ddv47i08, 5' end, single read.
Length = 614
Score = 1193 bits (602), Expect = 0.0
Identities = 602/602 (100%)
Strand = Plus / Plus
Query: 1 aaaattgtagagttgcaggttgtattgaaaatgtattaaaattattaaaatcaactaaac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13 aaaattgtagagttgcaggttgtattgaaaatgtattaaaattattaaaatcaactaaac 72
Query: 61 catcaattcaagatagttcattgagaatgttatataatatgacaattacagatgcaaata 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 73 catcaattcaagatagttcattgagaatgttatataatatgacaattacagatgcaaata 132
Query: 121 gagaggcaattagacgttgtaaaggtttggaaacattagcatcaatgttgagtggtcaag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 133 gagaggcaattagacgttgtaaaggtttggaaacattagcatcaatgttgagtggtcaag 192
Query: 181 cagaagcattgactttattatcattgaaagccctctcaaatatggctgtcgatagacaaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 193 cagaagcattgactttattatcattgaaagccctctcaaatatggctgtcgatagacaaa 252
Query: 241 ccattgaatatgcagtagccaatcaagagagtgtacttcaaccaatatatggtgttttcc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 253 ccattgaatatgcagtagccaatcaagagagtgtacttcaaccaatatatggtgttttcc 312
Query: 301 catcaagctatggtcaaggttgtagtgatgcattattggatcaagtgttaacagttattc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 313 catcaagctatggtcaaggttgtagtgatgcattattggatcaagtgttaacagttattc 372
Query: 361 aaaatttagtctctgaagagaatttaattgatacagtcgcaaagagtggtatcattgcta 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 373 aaaatttagtctctgaagagaatttaattgatacagtcgcaaagagtggtatcattgcta 432
Query: 421 aattggttggtgccaccaaaggtatgccattgacaaacacaactcatcaatccatactcg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 433 aattggttggtgccaccaaaggtatgccattgacaaacacaactcatcaatccatactcg 492
Query: 481 tcaaagcatcatgtatcattagtgctctcattaccattgaagaagttcaacaagctgccg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 493 tcaaagcatcatgtatcattagtgctctcattaccattgaagaagttcaacaagctgccg 552
Query: 541 tagaacaaggtgtaatcacattattggttgaaatgattcaacttccatccgctgaagtta 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 553 tagaacaaggtgtaatcacattattggttgaaatgattcaacttccatccgctgaagtta 612
Query: 601 ga 602
||
Sbjct: 613 ga 614
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Number of Sequences: 142339601
Number of Hits to DB: 2,271,029,355
Number of extensions: 130749887
Number of successful extensions: 10658829
Number of sequences better than 10.0: 143
Length of query: 1575
Length of database: 131,276,394,833
Length adjustment: 24
Effective length of query: 1551
Effective length of database: 127,860,244,409
Effective search space: 198311239078359
Effective search space used: 198311239078359
X1: 11 (21.8 bits)
S2: 23 (46.1 bits)
Dictyostelium discoideum cDNA Project Home