Dictyostelium discoideum cDNA Clone AFA742

Sequence AFA742

CTCAAAAGAG TTTTACCATA CTTTTACAGT GATGAAGGTC AAGATTTGGC
TTTTGTTCAA ACACCACAAT TCTTTAGTAA CATTTATCCA GTAGACGATC
CATTAGGTCA TCGTAATATG GAGTTTTATG GTCCAGTAAT GGAAGGTCGT
TCTGCAAACA ATGCCTGTCC TTTCGTAGGT ACAAACGCTA TTTTCAGACG
TCAACCACTC TATGATATCG GTGGTATTAT GTATAACTCT GTAACAGAAG
ATATGTATAC TGGTATGAAA TTACAAGTTA GTGGTTACAA ATCTTGGTAT
CACAATGAAG TACTTGTAGT TGGTACCGCT CCAGTAGATC TTAAAGAAAC
TTTGGAACAA AGAAAACGTT GGGCTCAAGG TGCAGTTGAA ATTTTCTCTC
TCACTCCTTG GGGTTACATT AGAGGTAAAC TTGGTTGGAG AAAGATGCTT
TACAATCTTG ATTCTTGTAT TTATCCATTC CTTTCACCAA CTGCTTTCTT
CTATGGTGCT TCTCCATTAA TTATGAGTAT TTGGACTGTA CCAATCGTTG
TAAAAGATCC AATCATTTTC ATTCTCGTCG GTATGATTCC TGTAATGGTG
TTACCAAGAG TCATTCAATA TATGATTCTT AGAGC----- -----GTAAG
AGTGGTCCAT CACTTTGGGT AGAAGCTACT GATCTTTGGA GAGCTGAACA
AACTTTCTTT GGTTTTGCTG GTACTTATAT TCCATCATGG AGAGAAGGTT
CCGCTTCAAT CGTTAAACTT CTTAAAGCTA GAAAGATTAG TCGTCATAAG
TTAGCCATGT GGAATTGGAA GAGAGATTTC GTAAAGAAAC CAGTAGTTTG
TGAAGTTTTC CGTCAAACTA AATTGGTCAA TGAAAATGAT AATGCTCAAG
AATCAAGTGG TAAACATAAG GCTGAACAAT CTTTCCGTAC TTCAAACAAA
GAATCTGATA CCATTAAAAA TTCAAGACTT TTCCTTCCAA ATATTATCCT
CTTTGTTGTT AATATCTTGG CTATGATGAG TGCTGTACTT AGATTTAATT
GTTTCCAAAA TGATATGTGG CTTTTGGTTG TCGTAGCTGG TTTCTCTTTC
TCTACCTTAT GGCATTTATG GTCTTTCATT CCAATGGCTC TTCGTCAAAG
TNAAAAACAA TGGCCATATG CTTCTTCATA CCATGCTCAC AATATTGTTT
TATTCTTGGT ACTGGTTTCT GGTATACTCT TGTNAGTCAA AGTTT

Translated Amino Acid Sequence AFA742

LKRVLPYFYSDEGQDLAFVQTPQFFSNIYPVDDPLGHRNMEFYGPVMEGRSANNACPFVG
TNAIFRRQPLYDIGGIMYNSVTEDMYTGMKLQVSGYKSWYHNEVLVVGTAPVDLKETLEQ
RKRWAQGAVEIFSLTPWGYIRGKLGWRKMLYNLDSCIYPFLSPTAFFYGASPLIMSIWTV
PIVVKDPIIFILVGMIPVMVLPRVIQYMILR---

---KSGPSLWVEATDLWRAEQTFFGFAGTYIPSWREGSASIVKLLKARKISRHKLAMWNW
KRDFVKKPVVCEVFRQTKLVNENDNAQESSGKHKAEQSFRTSNKESDTIKNSRLFLPNII
LFVVNILAMMSAVLRFNCFQNDMWLLVVVAGFSFSTLWHLWSFIPMALRQSXKQWPYASS
YHAHNIVLFLVLVSGILLXVKV

Homology AFA742 vs CSM-cDNA

Sequences producing significant alignments:                      (bits) Value


AFA742 (AFA742Q) /CSM/AF/AFA7-B/AFA742Q.Seq.d/                       2397   0.0
CHN239 (CHN239Q) /CSM/CH/CHN2-B/CHN239Q.Seq.d/                       1259   0.0
CFJ129 (CFJ129Q) /CSM/CF/CFJ1-B/CFJ129Q.Seq.d/                       1245   0.0
AFG410 (AFG410Q) /CSM/AF/AFG4-A/AFG410Q.Seq.d/                       1229   0.0
SHG583 (SHG583Q) /CSM/SH/SHG5-D/SHG583Q.Seq.d/                       1156   0.0
SHA559 (SHA559Q) /CSM/SH/SHA5-C/SHA559Q.Seq.d/                       1156   0.0
CHI464 (CHI464Q) /CSM/CH/CHI4-C/CHI464Q.Seq.d/                       1154   0.0
CHD887 (CHD887Q) /CSM/CH/CHD8-D/CHD887Q.Seq.d/                       1154   0.0
CHF204 (CHF204Q) /CSM/CH/CHF2-A/CHF204Q.Seq.d/                       1152   0.0
CHL591 (CHL591Q) /CSM/CH/CHL5-D/CHL591Q.Seq.d/                       1150   0.0

Homology AFA742 vs DNA

Sequences producing significant alignments:                  (bits) Value  N


(AF163835) Dictyostelium discoideum cellulose synthase (dcsA...  1259   0.0    2
(BJ325790) Dictyostelium discoideum cDNA clone:dda2d11, 5' e...  1259   0.0    1
(BJ361920) Dictyostelium discoideum cDNA clone:ddc19i07, 5' ...  1195   0.0    1
(BJ368878) Dictyostelium discoideum cDNA clone:ddc48m10, 5' ...  1187   0.0    1
(BJ340479) Dictyostelium discoideum cDNA clone:dda2d11, 3' e...  1176   0.0    1
(BJ407200) Dictyostelium discoideum cDNA clone:dds37e21, 3' ...  1150   0.0    3
(BJ376792) Dictyostelium discoideum cDNA clone:ddc29n22, 3' ...  1150   0.0    2
(BJ404481) Dictyostelium discoideum cDNA clone:dds28m15, 3' ...  1146   0.0    2
(BJ403565) Dictyostelium discoideum cDNA clone:dds25e15, 3' ...  1146   0.0    2
(BJ380606) Dictyostelium discoideum cDNA clone:ddc38p16, 3' ...  1146   0.0    3

Homology AFA742 vs Protein

Sequences producing significant alignments:                      (bits) Value


(Q9U720) RecName: Full=Cellulose synthase catalytic subunit A [U...   441   0.0
CP001037_1366(CP001037|pid:none) Nostoc punctiforme PCC 73102, c...   133   2e-29
CP000828_4747(CP000828|pid:none) Acaryochloris marina MBIC11017,...   129   3e-28
CP000951_2081(CP000951|pid:none) Synechococcus sp. PCC 7002, com...   124   8e-27
FR824670_2(FR824670|pid:none) Albugo laibachii Nc14, genomic con...   115   7e-24
FJ775602_1(FJ775602|pid:none) Saprolegnia monoica cellulose synt...   113   2e-23
EF564001_1(EF564001|pid:none) Phytophthora ramorum cellulose syn...   104   9e-21
EF563994_1(EF563994|pid:none) Phytophthora infestans cellulose s...   104   1e-20
FR824437_5(FR824437|pid:none) Albugo laibachii Nc14, genomic con...   104   1e-20
FR824229_3(FR824229|pid:none) Albugo laibachii Nc14, genomic con...   103   2e-20

Homology AFA742 vs Genome