Dictyostelium discoideum cDNA Clone AFA686

Sequence AFA686

AAAAAGACGA AAGAAATACA ATAATAAATT AATGTCAACA TTAGCAGATA
GATTTTTAGA TGATTTTAAT GATGGTGAAG ATGCATTAGT AGATTATGGA
TTAGGAAAAA GTAATGAAAA TAATAGTTTA TCAAATGATT TCATTAATGA
TTTTGGTGGT GAGGAAGATA ATAACAATAA TAATAATGAA AATTCCACTA
CTACAACTAC TACAACTACT ACTACAAATA TAAATATAAA GGATGATGAT
AATGATACAT TAATGGGAGA TCAAGATGAT TTAATGTTAT CAGATGAAAT
GATTGAAAAG AAACAAATTG AATTAATTAA TAAACATAAA GATGCACCAA
TTGAATCAAT TGCAAAATTA AATAATTCAA ATAAATTAAC ATCATTATTA
ACTCGTGTAA AAAATCAAAT GATAAAGAGT TTACCTGAAA AAGGTGTTAA
AACAGGTCAA GATTCTGAAG AACATAAATT AATCGTTGAA TGTAATCAAA
TGGCTCAAGA GATTCAACAT GAAATTTATT TAATTCATAA ATTTGTTCGT
GAAAGATATT CAAAAAAATT CCCTGAATTA GAAAGTTCCG TTCAAAATCC
ATTAGATTAT ATAAATTGTG TTAAAAGAAT TAAAAATGAA AATGATTTAA
TTAATGTTCA ATTAAATGAT TTA------- ---TTTAGTG GTATGTCAAA
TAGAAAGTTT CAAATGGGTT TAATTTCACA ATGTGATATT GTAAAGAAAG
CACCACCATT CTTACAAGTT AAAGCATTAC GTACTCTAAC TGGTAGAGTA
TCGATTGCTG CAAGAGTTGA TGCTCAACAA GATTCATCAT TCTATGGTGA
AACAGGTAGA CAATATCGTG ATGAAATTTT AGCTAAAATT GAGAAATGGC
AAGAACCACC ACCTCAAAAA CAAGATAAAG CACTACCTGC CCCTGAAGAG
GGTAAGAGAA CCAAGAGAGG TGGTAAAAAG GCTAGACTAT ACAAACAGAA
ATATGGTGTC ACCGATTTTC AAAAAGCTAA AAATCGTATG TCCTTTGGTG
TTGAAGAGAA AACTATAGGT GAAAGTGGTA TTGGTTTAGG TATGATTGGT
GGTGAAAGTG GTAAAGTAAG ACTGGTTGCT CAAGAAAGAG GTATCCTAAA
GAAAAAGAAA TTGGAACAAA AAAATTATGG TGGTTCTATG ACTTCTGCTT
CAACTAGTGG TCTTGCAAGT GTTGCCATTA CTCCTGTACA AGGCTTACAA
CTTTCTATTA CTCAAAATAT ACGTGAACAA GATAATAAAA CTGAAAAATA
TTTTTCATCT TCTAGTTTTA AAAATAAAAG AAAACTNAAC AATAAATAAA
A

Translated Amino Acid Sequence AFA686

KRRKKYNNKLMSTLADRFLDDFNDGEDALVDYGLGKSNENNSLSNDFINDFGGEEDNNNN
NNENSTTTTTTTTTTNINIKDDDNDTLMGDQDDLMLSDEMIEKKQIELINKHKDAPIESI
AKLNNSNKLTSLLTRVKNQMIKSLPEKGVKTGQDSEEHKLIVECNQMAQEIQHEIYLIHK
FVRERYSKKFPELESSVQNPLDYINCVKRIKNENDLINVQLNDL---

---FSGMSNRKFQMGLISQCDIVKKAPPFLQVKALRTLTGRVSIAARVDAQQDSSFYGET
GRQYRDEILAKIEKWQEPPPQKQDKALPAPEEGKRTKRGGKKARLYKQKYGVTDFQKAKN
RMSFGVEEKTIGESGIGLGMIGGESGKVRLVAQERGILKKKKLEQKNYGGSMTSASTSGL
ASVAITPVQGLQLSITQNIREQDNKTEKYFSSSSFKNKRKLNNK*

Homology AFA686 vs CSM-cDNA

Sequences producing significant alignments:                      (bits) Value


AFA686 (AFA686Q) /CSM/AF/AFA6-D/AFA686Q.Seq.d/                       2083   0.0
SFC337 (SFC337Q) /CSM/SF/SFC3-B/SFC337Q.Seq.d/                       1277   0.0
AFO514 (AFO514Q) /CSM/AF/AFO5-A/AFO514Q.Seq.d/                       1277   0.0
SFB226 (SFB226Q) /CSM/SF/SFB2-B/SFB226Q.Seq.d/                       1112   0.0
SFG687 (SFG687Q) /CSM/SF/SFG6-D/SFG687Q.Seq.d/                       1072   0.0
CFI387 (CFI387Q) /CSM/CF/CFI3-D/CFI387Q.Seq.d/                       1057   0.0
VFO364 (VFO364Q) /CSM/VF/VFO3-C/VFO364Q.Seq.d/                        892   0.0
AFA415 (AFA415Q) /CSM/AF/AFA4-A/AFA415Q.Seq.d/                        658   0.0
AFI509 (AFI509Q) /CSM/AF/AFI5-A/AFI509Q.Seq.d/                        638   0.0
VSG271 (VSG271Q) /CSM/VS/VSG2-C/VSG271Q.Seq.d/                        365   1e-99

Homology AFA686 vs DNA

Sequences producing significant alignments:                  (bits) Value  N


(BJ399310) Dictyostelium discoideum cDNA clone:dds5j09, 3' e...   959   0.0    2
(BJ346188) Dictyostelium discoideum cDNA clone:dda30k03, 3' ...   959   0.0    2
(BJ340592) Dictyostelium discoideum cDNA clone:dda2k22, 3' e...   959   0.0    2
(BJ400807) Dictyostelium discoideum cDNA clone:dds14m22, 3' ...   959   0.0    2
(BJ375227) Dictyostelium discoideum cDNA clone:ddc17n21, 3' ...   959   0.0    2
(BJ398943) Dictyostelium discoideum cDNA clone:dds3c08, 3' e...   519   0.0    3
(BJ325904) Dictyostelium discoideum cDNA clone:dda2k22, 5' e...   389   0.0    4
(BJ328933) Dictyostelium discoideum cDNA clone:dda30k03, 5' ...   373   0.0    4
(BJ387544) Dictyostelium discoideum cDNA clone:dds3c08, 5' e...   339   0.0    4
(BJ436056) Dictyostelium discoideum cDNA clone:ddv29p15, 3' ...   660   0.0    2

Homology AFA686 vs Protein

Sequences producing significant alignments:                      (bits) Value


AC150800_1(AC150800|pid:none) Medicago truncatula chromosome 7 c...   120   1e-25
BT036493_1(BT036493|pid:none) Zea mays full-length cDNA clone ZM...   109   4e-22
AP004010_10(AP004010|pid:none) Oryza sativa Japonica Group genom...   109   4e-22
BT054842_1(BT054842|pid:none) Zea mays full-length cDNA clone ZM...   109   4e-22
AK066109_1(AK066109|pid:none) Oryza sativa Japonica Group cDNA c...   108   9e-22
CP001575_252(CP001575|pid:none) Micromonas sp. RCC299 chromosome...   107   2e-21
CP000584_134(CP000584|pid:none) Ostreococcus lucimarinus CCE9901...   105   6e-21
CR954202_367(CR954202|pid:none) Ostreococcus tauri strain OTTH05...   104   1e-20
FR823387_333(FR823387|pid:none) Neospora caninum Liverpool compl...   102   4e-20
(Q8WWY3) RecName: Full=U4/U6 small nuclear ribonucleoprotein Prp...    99   6e-19

Homology AFA686 vs Genome