Dictyostelium discoideum cDNA Clone AFA124

Sequence AFA124

ACTGTTGGCC TACTGGAATT TCTCCAATCA TCATATTTAT AATTATATCT
TTTTTGTTTA ATAAAAAAGA AAGAATACCA ACATGAGACT TTTATTGTGT
TTAATTTTCT TAGTTTTTGT TTTCAATTTT GCATTATCAA CAGTTCATTT
CAAAGGATAC CTTTGATAAC GATTGGGAAT CAAGATGGGT TGTTAGTGAT
TGGCATAAAG AAGATGGTAA ATCAGGTAAA TTAGTTCATA CTGCAGGTAA
ATGGTTTGGT GATGAAAATC AAAAAGGTAT TCAAACTAGT GAAGATGCTC
GTTTCTACGC TGTATCAGCT AAATTCCCAA GTTTCAGTAA CAAAGGTAAA
GATTTAGTTC TCCAATACAC TGTAAAGAAT GAACAAAAAG TTGATTGTGG
TGGTTCATAC ATCAAGTTAT TACCATCCAA ATTAGATCAA TCAGCATTCG
ATGGTGAATC TGAATATTCC ATTATGTTTG GTCCAG---- ------AGCT
TCAATCGTTG ATCCAGAAGC TGTCAAACCA GAGGATTGGA ATGAAGAAGA
CGACGGTGAA TGGGAAGCCC CAACCATCGC CAATCCAGAA TACAAAGGTG
AATGGAAAGC AAAGAAAATC CCAAATCCAG AATACAAAGG TGAATGGGTA
CACCCATTAA TTGATAACCC AGAATACGCT GAAGACAATG AACTCTACCT
CTTTAATGAT CTCGGTGCTA TCGGTTTCGA ATTATGGCAA GTTAAATCTG
GTTCCATCTT TAACAATATG ATCGTCACCG ACTCTGTCGA AGAAGCTAAA
GATTTCTCTG AAAAGACCTT TGTTGCCAAC CAAGAAGCCG AAAAGAAAAT
GTTTGACGAC CTCGAAGCCG CCAAAGCTGA AGAGAGAAAG AAAGCTGACG
AAAAATTAGC TGCCGAAAAA GCTGCTGAAA AAGAAGCCGA AGAAGCTGAT
GAAGAAGAAG AAGAAGTCGC TGAAGAAGAT TTAGTTAAAA CTGATGACAA
AAAAGAAGAA GTCAAAAAAT CAACCAAAAA AGTTGNTNCA TGNACGAA

Translated Amino Acid Sequence AFA124

cwptgispiiifiiisflfnkkeript*dfycv*fs*FLFSILHYQQFISKDTFDNDWES
RWVVSDWHKEDGKSGKLVHTAGKWFGDENQKGIQTSEDARFYAVSAKFPSFSNKGKDLVL
QYTVKNEQKVDCGGSYIKLLPSKLDQSAFDGESEYSIMFGP---

---ASIVDPEAVKPEDWNEEDDGEWEAPTIANPEYKGEWKAKKIPNPEYKGEWVHPLIDN
PEYAEDNELYLFNDLGAIGFELWQVKSGSIFNNMIVTDSVEEAKDFSEKTFVANQEAEKK
MFDDLEAAKAEERKKADEKLAAEKAAEKEAEEADEEEEEVAEEDLVKTDDKKEEVKKSTK
KVXXXT

Homology AFA124 vs CSM-cDNA

Sequences producing significant alignments:                      (bits) Value


AFA124 (AFA124Q) /CSM/AF/AFA1-A/AFA124Q.Seq.d/                       1719   0.0
VFL283 (VFL283Q) /CSM/VF/VFL2-D/VFL283Q.Seq.d/                        948   0.0
VFL214 (VFL214Q) /CSM/VF/VFL2-A/VFL214Q.Seq.d/                        948   0.0
AFI321 (AFI321Q) /CSM/AF/AFI3-A/AFI321Q.Seq.d/                        948   0.0
AFA296 (AFA296Q) /CSM/AF/AFA2-D/AFA296Q.Seq.d/                        946   0.0
SFH596 (SFH596Q) /CSM/SF/SFH5-D/SFH596Q.Seq.d/                        942   0.0
AFA112 (AFA112Q) /CSM/AF/AFA1-A/AFA112Q.Seq.d/                        942   0.0
AFK274 (AFK274Q) /CSM/AF/AFK2-D/AFK274Q.Seq.d/                        934   0.0
AFK242 (AFK242Q) /CSM/AF/AFK2-B/AFK242Q.Seq.d/                        934   0.0
AFH646 (AFH646Q) /CSM/AF/AFH6-B/AFH646Q.Seq.d/                        934   0.0

Homology AFA124 vs DNA

Sequences producing significant alignments:                  (bits) Value  N


(U36937) Dictyostelium discoideum calreticulin mRNA, complet...   745   0.0    4
(BJ325728) Dictyostelium discoideum cDNA clone:dda1o05, 5' e...   704   0.0    2
(BJ326592) Dictyostelium discoideum cDNA clone:dda17j05, 5' ...   654   0.0    3
(BJ415802) Dictyostelium discoideum cDNA clone:ddv23e22, 5' ...   654   0.0    3
(BJ415615) Dictyostelium discoideum cDNA clone:ddv23k04, 5' ...   654   0.0    3
(BJ325680) Dictyostelium discoideum cDNA clone:dda1o24, 5' e...   654   0.0    3
(BJ388970) Dictyostelium discoideum cDNA clone:dds16o23, 5' ...   654   0.0    3
(BJ325702) Dictyostelium discoideum cDNA clone:dda1g03, 5' e...   696   0.0    3
(BJ325647) Dictyostelium discoideum cDNA clone:dda1d24, 5' e...   702   0.0    3
(BJ327651) Dictyostelium discoideum cDNA clone:dda21c12, 5' ...   654   0.0    4

Homology AFA124 vs Protein

Sequences producing significant alignments:                      (bits) Value


U36937_1(U36937|pid:none) Dictyostelium discoideum calreticulin ...   239   2e-61
CP002684_1076(CP002684|pid:none) Arabidopsis thaliana chromosome...   218   4e-55
HC747470_1(HC747470|pid:none) Sequence 4561 from Patent WO201004...   194   7e-48
AB196794_1(AB196794|pid:none) Glycine max Gm crt-1 mRNA for calr...   194   9e-48
EF085019_1(EF085019|pid:none) Picea sitchensis clone WS0297_I16 ...   193   1e-47
EF146676_1(EF146676|pid:none) Populus trichocarpa clone WS01211_...   192   3e-47
AB021259_1(AB021259|pid:none) Oryza sativa mRNA for calcium-bind...   191   7e-47
HC747436_1(HC747436|pid:none) Sequence 4527 from Patent WO201004...   190   1e-46
AK104328_1(AK104328|pid:none) Oryza sativa Japonica Group cDNA c...   190   1e-46
(Q9SLY8) RecName: Full=Calreticulin; Flags: Precursor;  &AK06534...   190   1e-46

Homology AFA124 vs Genome